Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%

                                                          cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         . ] 1412
 1 Target                                              100.0% 100.0%    ------------------------------------------------------TCGGCAGGAGCTCCCTCTCTCCCAGCTGGCAGGCCAGGCTCCATCTGGTGACTTTTCAGGAAAGGCTCCCCCACCG-T----------GGCTGCCACGAGCCTGGCTCCCTCTGCAGCTCCTCTGGG-------GTGTCCTGGAC-GGTGGCTGGG---G----------GCAAGG----------CCGTGCACCTGCCTTCAGAGAGCCCCAGGCCAGGTGGGTGCGA---TGCCCCTGCTGGCCATGCCCTGCTCAGTGAGGGCAGAGAGGCAGCCAGGGCCTCAGAGAAACCAGTGACTTGTGGCAGGGACAGGAGCCTCCAGGGACACACAATGGGGGGGGCA-----------------CTCGCGGTGGGGGGAGGAAGCTGTGAAATGGGCTATTAATAGGGTCCCCTTCCTGATGGGGCTGTCAAGTGCGATTAATACCGCTGCTG----TGAGCTGGGCT------GCCACCAGCTGGGGATGGCTGGGGACGGCGAGGGGGCAG------GAAGGGGA----GCCCACTCTGGGAGGGACCCTTACTGAGATGGGGACCTGGCCCTGGCTGTCCCG-AAGAGGCCAGAGA-------------------AAGGCCAGAT-GTTGGGGCCCCCTTGGCCATAGCGGGCCAGCTGG---AGAGTGTGGAGGCCT---GG----GC-TGG--------------------GCAGGCGCCCA------CC-TGCACAAGAAGGGCT-GCACTGGG------------GGAAGGTACGGGTC---------ACCTGGCCTCAGAGGCCATCCTGTCCACT--------------------------------TGCCACTGCCGGCTGCTTGGAGGGTCCAGTGGCCTCAAGTTCCTGCA------------CCTTTCTGTGCAACTGG----------GACTGCTTTGGACACCTGTGACCATCACAAGT-CCTCCTGTCCATCCC--TCCACACCGGGTGGCCGGATGACAGAAGAAAGGTGTCTGCTGGCCCTCCCTCTGGGCCCTG--TGGGAG-------------CTGGATCCTTCTAGCAG-CAGCTGGGCCA-------------------------------------------CCAGGGGAGCATGAGCCT--GGCTGCTGT-CCTCC---CCCTGCTCTGGGGCCGGTGGAAGGTGGAGGG--------------CAGGTC-----------AG----GTGGCGCGGCCGATGGAGTATGGCTGGCCATCGAGAACCTGTCC-----------------------CCACGCTCTAGGACACTG---------------------     
 2 Theropithecus_gelada-NC_037668.1-195834_196828       94.3%  81.5%    ------------------------------------------------------------------------CTCCCAGCTGGCAGGCCAGGCTCCATCTGGTGACTTTTCAGGAAAGCCCCCCCCCCCC-CCGCACACTGTGGCTGCCACGAGCCTGGCTCCCTCTGCAGCTCCTCTGGG-------GTGTCCTGGAC-AGTGGCTGGG---G----------GCAAGG----------CCATGCACCTGCCTGCAGAGAGCCCCAGGCCAGGTGGGTGCGA---TGCCCCGGCTGGCCATGCCCTGCTCAGTGAGGACAGAGAGGCAGCCAGGGCCTCAGAGAAGCCAGTGGCTGGTGGCAGGGACAGGAGCGGCTGGTGGCAGGGACAGGAGCCTCAAGGGACACACAGCGGGGGGCACTTGTGGTGGGGGGGTGCTGTGAAGTGGGCTATTAATAGGGTCCCCTTCCTGACGGGGCTGTCAAGTGCGACTAATACCGCCGCTG----TGAGCTGGGCT------GCCACCAACTGGGGACAGCGAGG----------GGGCAG------GAAGGGGA----GCCCACTCTGGGAGGGACCCTCACTGAGATGGGGACCTGGCCCTGGCTGTCCTG-AAGCAGCTAGAGA-------------------AAGGCCAGAT-GTTGGGGCCTCCTTGGCCATAGCGGGCTGGCTGG---AGAGTGTGGAGGCCT---GG----GC-CTGGGCTG--------------GGCAGGTGCCCA------CC-TGCATAAGAAGGGGCTGCTCCGGGGGAAGG-----TACAGGGCACAGGTC---------CCCTGGCGTCAGAGGCCATCCTGCCCACT--------------------------------TGCCACTGCTGGCTGCTTGGAGGGTCCAGTGGCCTCAAGTTCCTGAT----GAGGGGCACCTTTCTGTGCAACTGGGACTGCTTTGGA----------CACCTGTGACCATCACAAGT-CCTCCTGTGCATCCC--TCCACACTGGGTGGCTGGGTGACAGAAGGAAGGTGTCTGCTGGCCCTCCCTCTGGGCCCCG--TGGGAG-------------CCGGATCTTTCTAGCAG-CAGCTGGGCCA-------------------------------------------CCAGGGGAGCATGAGCCT--GGCTGCCGT-CCTCC---CCCTGCTCTGCAGCCGGGGGAAGGTGGTGGG--------------CAGGTC-----------AG----GCGGCGCAGCCAGTGGAGAACCTGTCCCCACCCTCTAGGGCGC---------------------------------------------------------------     
 3 Aotus_nancymaae-NW_018508829.1-97711_98706           96.6%  77.1%    ------------------------------------------------------------CAGGAGCTCACTCTCCCAGCTGGTAGGCCGGGCTCCATCTGGTGACTTTTCAGGAAAGGCCCCCCCACCG-C----------CGCTGCCAAGAGCCTAGCCCCCTCTGCAGCTCCTCTGGG-------GTACCCTGGGC-AGTGGCTGAGGTGC----------CCTGGG----------AAGTGCACCTGCCTTCAGAGAGTCCCAGGAGAGGTGGGTGTGA---TGCCCTGGCTGGCCATGTCCTGCTCAGTGAGGGCAGAGAGGCAGCCAGGGCCTCAGAGAAGCTAGTGGCTGGTGGCAGGGACAGGAGCCCCCAGGGACACACAGAGGGGACACTTGCA------------------------GGAGGGGAAGCTGTG--AAATGGTCTATAATAGGATCCCTTCCTGATGGGGCTGTCAAGTGCGATTAATACCGCCACTG----TGAACTGGGCT------GCCGCCAGCTGGGGACGGCCGGGGATGGTGAGGAGGCAG------GAAGGGGA----GCCCACTTTGAGAGGGACCCTCGCCGAG--ACAGACCTGGCCTTGGCTGTCCTGGAGGAGGCTGAAGA-------------------AAGGCCAGGT-GTTGGGGCCCCCTTGGCCATAGCTGGCCGGCTGG---AGAGCGTGGAGGCCT---GG----GC-T------G--------------GGCAGGCGCCCA------CC-GGCCCAGGAAGGGGCTGCTCTGGAGGGAGG-----CTCGGGGC-ACGGGG---------CACCGGCCTCAGAGGCCGTCCTGTCCACT--------------------------------CGCCCCTGCTGACTGCTCAGAGTGTCCAGTGACTACAAATTCCTGAT----GAGGGGCACCTTTCTGTGGAACTGGGACCCTGGCTGAGGGTTTTGGACACCTGTGACTGTCACAAGT-CCTCCCACCCATCCT--CCA-CACCTC-----GTGGCTGGATGACAGAGGTGTCTGCTGGTCCTCCCTCCGGACCCTG--CAGGAG-------------CCCGGTCCTCCTAGCAC-CCACTGGCCCA-------------------------------------------CCAGGGGAGCATGAGGCT--GGCTGCTGT-CCTCC---CCCTGCTCTGTCACCAGTGGAAGGTGGAGGG--------------CAGGTC-----------GG----GCAGCGAGGCTGATGCAGCTTGGCTGGCCATCGAGAATCTGTCC-----------------------CCACCTTTCAGGG--------------------------     
 4 Galeopterus_variegatus-NW_007727608.1-229589_230293  87.7%  51.6%    ------------------------------------------------------CGATGGGAGCTGCCTCTCCTTCCCACAGGCAGGCTGGGCTCCATCTGGTGACTTTTCAGGAAATGGCCCCCACCCT-CTAGC------GGCTGCCTGGAGCCTCGCTCCCTCTCCAGCTGCTCCAGG-------GGGTCTGTGCA-GTGGCTTGAGG-------------GCGA-----------------GGCCCTGTCCCCAAGAGCCCCAGGCCAGGTGGATACATG--TCCGCTTGGCCTGCAGGTCCTGCTCAGTGAGGAGGCAGTGAGGC-------CTTGGGGAAACGAGTGGCTGATGC-AGGGACAGGAGCCTGGGGCGCG--TGAATG--------------------------GGTGCCTGTGGCACAGGAAGCTGTGAAATGGGCTGTTAACAGAGCCCTCTCCTG--CAGAGCTGTCGAGGGTGATTGATGT-CCCACTG----TGAGCTGGGCTGCGCACGCCACCAGCTGGGGATGGCCAGGGA-CGGTAGGGGACAG------AAAGGGGA----GCCCAGCCTGGGAAGGACCCTTCCTAAGGGTTGGACACAACCCTGGCTGGTCACGAGGAGGCCCTGGCTCTGCTGGGCAGCCAAAGGAATGCCTGAT-GCCGGGTGC---------CCAGCAGGCTGGCTGGGAGCCAGCGTGGAGGGGCCC-GG----TTTGGGCAGGA--------------GCCTGGGGACCA------CC-TGCACCAGAAGGGGCATTTCTGAGGGGAGG-----TGCTCGGCAT-----------------TGCACACCCCCGGCCTGATCACTCGC--------------------------------TGCCACTGCTGGCTGCTTGGAATGTCCAGTGGCTGCGAGCTCCTGAT----GTCAGACACCGTCCTGTGCCGGGTGTCAGGACAGTA----------------------------------------------------------------------------GGAAGGTCCCCACTGGCCCTTCCTTTGGGCCTGA--TGGGGA-------------CCAGATCCCTCTGGCAG-GAGCTGGTGCCACCAGCTGGGGATGGGCCAGG----CTGCTGCTGAGTCCCCTGCCCGGCAGTCCAGGACCT--GGCTGGACG-AGTCCCCAGGGATCCCTGGGGTAGGTGGAAGGTGGAGGCTCAGGCCTA-GGGACAGTTT-----------GG----TCCGTGTGTCAGTTAGAGCATGGCTGGCCATTTCGTGTGTGTTC-----------------------CCAGCCACCAGGATGT-----------------------     
 5 Propithecus_coquereli-NW_012152752.1-165534_166470   81.9%  41.9%    -----------------CTCCCCTGGAGCTGCAGCCCCT----GC------CCCACGGTGGGGGCTCCCCCTCTTCCCAGCTGGCAGGCCGGGGCCTTCTGGTGACTTTC-AGGAAAGGCC------------------CATGGCTGCCGTGAGCCCGGCTCCCTCTCCAGCTCTGCCGGG-------GGTGTCCTGGGCAGTGGCCTGGG--------GCCAGCAGCAG----------CCACGCACCTGCCTCCAGAGAGCCCCAGGCCAGCCGGGGCAGCTGTGTCCCTCGACGGCTGTGCCCTGCTCGGGGAGTGAAGAG--------------------------------------GAGGCCA-CTGTGACTTGTGGTGGGGACAGAGCCCCCAGGGACATGTGAATGAGGGACACCTCCAGGGATGGG-------GAAATGGGCTACTAGCAGAGTCCTCTTCCCCACTGGACTGTCGTATGTGATTAATGCCACTGCTG----TGAGCTGAGCTGCCACACGCTGCCGACT--GGGGATCGGGGACGGAAAGGGGCAGG------AATGGGGA----GCCTGTCCCAGGAGGGAGCCCCGCTATGGCCAAGACATGGCT-CGACCAGTGTGAGGAGGCCCCGAGCTCTGCTGGGCAGGCAGAGAAAGGCCAGAT-GTTGGTGCCTCCTTGGGCTGAAGTCACCAGGCCCCCGTGGCCGGAGCAGGAGGG-AG----GCAG-----AG--------------TGAGGGGCTCCT------CTGGGGGCAGGCACTGGGAGCCACGGCC-----------TCAGGG----------------------------AATGTCCCGT------------------------------------------CCACTGCCAGCTGCTTGGGACGTCCG-TGAGTGTGAGCTCCTGAC----GCTTGG-CCCTTCCCATGCAGCTGGGAC----------AGCTCCGGACGCCTGTGACCGTCAGAAAT-CCTTCTGTCCACCAC--TCCCCATGGGGTGACCCTCCCTGTGGGCCCAGAGGGGGCCCCGATTATTCTCGCAGCAGTGGGTGCCACCGGCGGGGGTGGGCCCGGATCTGCTGACCCTGCTCTGGGGGTTGGGCGCAGGAATGGATCAGCTGGTGTGACG-------------------------GGTGGAGCACGGCTGGCCCTCGAGAGTCT-----------------------GTCCCCACCCTCC-AGG-ACGCACAGCCCCTGACCCC----TACTCAAGTCTTT---------------------------------------------------------------------------------------------     
 6 Carlito_syrichta-NW_007256000.1-130467_130889        86.0%  48.6%    ---------------------------------GACCCCTCCCCT------CCCTCAGCAGGAGCTGTCTCTCTCCCCACTG-GCAGGCTGGCTCTGTCTGGTGGCTTTTCAGGAAAGGTCTCCCACCGC------------AGCTGCTGCCCGCCCGGCTCCCTCTGTGGCTGTGTGGGG-------GTGTCCCGGGC-AGTGACCTGGGCAA--GG-CCTGCGCCTGG----------CCGTACGCCTG-CTCCAGAGAGCCCCGGGCCG-GCGTGTG-----------GGTGTCCCGGTGACCTGCTCAGCGAC-------GGAGCAGCAGGGCCTCGGGGAAGCCAGGGGCTGTGGC-GGGGACAGGCGCCCCCAGGG---------------------------ACAGAATGGGCACCTGCGGGAGCAGGAAGCTGTGAAATGGGCTATGAATAGAGTCCTCTTCCCGGCTGGGCTGTCGAATGTGATTAATGCTGCCGTGA----GCTGAACTGCCAC--ATGCCACCGGCTGAGGAAGGCGAGG-------------GTG------GAAAGGGA----GCCGGCTTGTCGGGGAACCCTCACGGTGGCCAAGACATGG-CCTGACCGGCCACAAGGGGACCCCGGCTCTGCTGGATAGGCGGAGAAGGGCCTGGC-ACTGGGGCTTCCCTGGGCCATCACCAGGGCCCCC---------------------AG----CC-A-AGGGCA--------------GGCCAGGACCCA------CT-TGTACAAGTGGGTGTAGACAGGGCTGTCAGTCCTCTTGGGGGAGAGGTGC---------TGGACACAGGTTACCCCACCCTTGAGACC--------------------------------GTCCACTGCTGGCTGCTTGGAGTGTCCGATGACCACCAGTTCCTGAC----ATCTGACACCTTCCTACACAGCTGAGACAGCGCTGTAGGTCTGTATCTTGCGATCCC------------------------------TTCCTTGGGTGACCAGATGATGGAAGGAGGGTTCCTGCTGGCCCCTGGGCTGG-------------------------------ATTCTTCTGGCAG-CAGTGGATGCTACCAGCAGGGGCTGGGTCAGG----CCCTGA-TGTCCCCTCTGCCCGTC--CC----CCCA--GGCTGCCAT-CCTTC---CCCTGCTTTGTGGGTGGGAGGTGGGGGCCTCTCAGCC-------CAGGGAC-----------AG----TCGGGTGGTGTGATGGCGCATGGCTGGCTGTCAAATGCCT------------------------------------------------------------------     
 7 Lemur_catta-NC_059130.1-163764_164710                82.4%  41.3%    --------------------------AGCTGCAGCCCCTGGCCGG------CAGGCGGTGGGCGCCCCCTCTCCTCCCAGCGGGTAGGCTGGGTCCTTCTGTGACTTCCA-GGAAAGGCCC------------------CACAGCTACCGTGAGCCCGGCCCCCTCTCCAGCTCCTCCCAG-------AGTGCCCTGGGCGGTGGCCCGCG--------GCCAGCATGAG----------CCATGCACCGGCCTCCAGAGAGCCCCTGGCCAGCGGG----CGTGTGTCCCTCGCCGGCCGTGCCCTGCTCGGAGAGTGAAGAG--------------------------------------GAGGCCACCCATGGCTTGTGGTGAGGACGGAGCCCCCAGGGACATGGGAACCAGGGACACCTCCAGGGACGGGGAGCTGTGAGATGGGCTGTTAACAGAGTCCTCGTCCCGACCAGACTGTCGCGTGTGATTAATGTCACTGCTG----TGAGCTGAGCTGCCACCCACCGCCGGCG--GAGGATGGAGGACGGAAAGGGGCAGG------GAAGGGGA----GCCCGTTCCAGGGGGAG-CCCCGGGGAGGCCAAGACCCCGCC-CGGCCAGCACGAGGAGGCCCCGGGCTCTGCGGGGCGGGCAGAGAAAGGCCAGAT-GTTGGGGCCTCCCTGGGCTGAAGTCACCAAGCCCTGTGGCGGAGGCAGGAGGGG-GC----AGAG-----TG--------------GGGAGCTCCTGG------GGCGGGGCAGGCGCTGGGAGCCACGGCC-----------TCAGGG----------------------------AATGTCCCGTCCACTTGC--------------------------------TGCCACTGCCAGCTGCTTGGGACATCTG-TGAATGCGAGTTCCTGAC----GCTCGG-CCCTTCCCCTGTGGCTGGGAC----------AGCTCCGGACACCTGTGACTGTCACAAAT-CC---TGTCCACCAC--TGCCCATGGGGTGATCCTCCATCTGGGCCCAGTAGGGGCCCCGATCCTTCTCAAAGCAGCGGGTGCCCCCCAGGGGAGTGCGCCCGGCTCTGCTGACCCTGCTCTGGGGGTCAGGCCCAGGGACGGGTCAGTTGGTGGGGTG-------------------------AGCGGAGCGTGGCTGGCCCTCAAGAGTCT-----------------------GTCCCCACCCTCT-AGG-ACGCACAGCCCCTGACCCC----ACTCCAGG--------------------------------------------------------------------------------------------------     
 8 Urocitellus_parryii-NW_020540697.1-268634_269083     82.0%  42.7%    -----------------------------------------CCTGGA----GGACTCTCCCTGGGAGTT----TCGGGCCCCCCACCCAGGGCTCCATCTGGTGACCTTCCAGGTTTAAAGAGCCC--------------------CACCCCAAGGCTACTCCCTCTCCAGTTCCTC------CTGGAGTGTCCTGGGC-AGTGGCGTGGGG-GCCAGACCTGTCCCCCATGCTGG----CCGTGCACCTGTCTTCAGGGAGCCGT-GGCCAAGTGT-----GTGTGCATCTGCTCAGCC-AGGCCTGCTCAAGGGCGAGGGGAC-GAGAACTGAGGCTCGGGAAAGCCAGTTGTTGGTGT--------------------SA---GGGACAGGGCCCCAGGGACATGGGGCTGAGGGGCACCTGCGGGAGCAGGGAGCTGTGAAATGGGCTATTAATAGAGTCCTCTTCCTGGAGG-ACTGTCGAGTGTGATTAATGCCACCACTG----TGAGCTGAGCTGCCACATGCCACCAGCTGGGGCTGTGCGGGGCAGGGAGAGGCGCA----------------------TTCTCTGGAGGGACCCTCACTGAGGCTGGAC-TTGGCCCTGGGGCTGAAAGGAGGCCCGGGCTCTGC--TGGGCAGTCAGAGGAAGGCCTGAT-GTGGGGGCCTCCCTGGGYTGAAGGCACTTCCTCCTGTGGCCAGACTG--------------CCTGGAGGGGA-------CGGGATGGGGCAGGAGCMCAGGGCCACCTACACAAGAAGGGCCTTCTCTGAGGGGATGTGCTG------------GACAGTGGC--TACCCGGCCTCAGAGAATGTCCTGTCCATTTC------------------------------TGCCACTGCAGGCTGTGTGGACCACCCTGGGACTGAGAGCTCCTGAT----GTTCAGCACCTTTGCRTGCAGCTGGAC-----------ACCTGTGGACCTCT--GTCCGTCAGACGGTGTCCATCCCTA---A--GTCCCTATTGGTGGTGAGACTAY----AAGAG-GCCCTGTGAGTGCTCTCCCTGGGCCAA----GTGGG--------------------GCTGGATCCCGGAGCTAATGCCGGGAGCTGAGGATGGCCAGGTTGC-TGCCATCCCCACGCCTAACGCA-----A--CAGCCGGAGCTGGCTGC-ACAAG---CC-CCAGGGACCTTTGGGAGCAGGTGGAAGGTCA--------------------------------------------------------------------------------------------------------------------------------------------     
 9 Heterocephalus_glaber-NW_004624818.1-167453_167757   79.0%  32.6%    ----------------------------------------------------GGCTGG-----AGTGGCCCAGCCCTGG-GCTCTGGCCCTCGGGGCTCTGCTGGCCGTGTCCT---CCACCCCCGGGGTCCAGACTGGCCCTGGCCCCTGGG-AAGCCCCACCTCTGCAGCCCCTCTG---------GGCACCAGGCA-GTGGCTCGGGGGGCCAGGACCTGTCCCAT-----------CTGGACACCTGCCCCTAGGAGGCCAG-GC-CAGGCAG-----GT-GCTGTGTGCTTGGCCAGGCCCCGCTGGAG----AGTGAGAGGCAGCGGAGGCCTCAA-----------------------GGAAGAGTGGCTGGTGGCAGGGAAAGGAGCCCCCGGGGACACAGGGATGCAGGGCACCTGCGGGAGCAGGAAGCTGTGAAATGGGCTATTAATAGAGTCCTCTTCCTGGCGGGGCTGTCAAACGTGATTAATGCCACCACTG----TGAGCTGAGCTGCCACGTGCCACCAGCTAGGGACAGAGGAGACACTGAGGGGTAGGCTGGGCTCTG-------------------------------------------------CTGGGTGGGCAGAGGAAGGCCGGATGTTGG--GGAGTCCTGATTGGAAGGCACCATGCCCCCCTCTA--------TTAAGACACCTGGAAGACAGCGTGGGGTGAGGGTC--------CTGTGTGGGCA---------------GGAGTGGGGAC------CCTTGGATGA-GAAGGGCTTCCTTGGGG-CCAG------------TGCTGGCCAGGGAATGGCCCTGGCCTTAGAGAATGTCATCTTGCTGCTGCTGCCAGCCAAGTGCACCGCCTGGTGGCAGAGCTCCTGACACTGCTGGGTCCTTGCCACCAGAGGGCCAGCTGGAGGC--CCCTGGGCTGCCGCCCTGCCTCTGGACCG---------GGATGGGGGCTGGCTCGGATGGGCCAAGTTGCTGCTGTCTCC-AGCCCAGCCCAGCCATCCAGGCCAGGCT----GCTCACGTCC-CGGGACCTCACTCTGAGGGAAG--GCAAGG-------CTTGGGCCTGGGGATGG-------CCAGTGGTGCAGGGGACAGAGCATGGGCTCGGGATGACG-GTGTCTATCCTCTAAGACGC-------TCGCTACCCTGGCTGCCCCTGGG--GT-CTGAGTGCTGCGG-------------A-------------GCCAGATGAGGCA----------------------------------------------------------------------------------------------------------------------     
10 Castor_canadensis-NW_017871110.1-158336_158811       82.6%  41.1%    -----------------------------------------------------CTCTCTCTGAGCTGCATCCCCCTCCCCTCCCTCCTCAGGCTGAATCTGGTGACTTTCT--AGGAAGAGCCCTA-------------CATAGACAGCTGCAGCCTGGCTTTTTCTCCAGCTTCTGCTAGGGGTATCCCATCCTGGGA-AGTGACTTGGGGGCCAGGATCTGA----------------CCAGGCACCTGCCTTCAGGGAGTCCA-GG-CTAGGTG-----TTGCATGTCTGTTCGGTTGGGCCCTGCTGGAG---GAAGGCAAGGCAGCTGAAGCCTTGTGAAAGCAAGTAGCTGGATG--------------------CAAGGACAGGAT-CCCCCAGGGACACAGGACTGAGGGGCACCTGTGGGAGCAGGAAGCTGTGAAATGGACTATTAATAGAGTCATCTTCCTGGCAGGACTGCTGAATGTGATTAATGCCACCGCTG----TGAGTTGAGGTGCCATATGCCAGTGCCTGGGGATGACCAGGGACAGTGAGGAGACA----TGGGAGG-----------GTCTCTGGAGGGACCCTCACTGAGGCCAGTACATCACCCTGGTGTCCAGATAAGGCCCCAACTCT----GCTGTGCAAGTGGGAAGGCCCAGT-GTTGGGGTCTTCCAGGGCTAAAGGTGCCAGGTC--------CCCCACGTCATTGTAGGCAGCCTGGGAGCATGGAGGAGTCTGATTGGGAAGGAGCCCAGGTTCACCTGCACAAGAAGGGGATTCTTTG-------------GGGACAGGCACCAGCAATGGATACCTCTGGCCTTAAAGAATATTCCGTCCACTTG------------------------------CTGTCCTGCTGGCTGCATGGAGAGT---------------TCCTGAA----ATCTGGCACCTTCCCATGTGGCTTTGG-----------ATCTGTGGCTGTCA--CG---------TGTGCTCCTGTCCCTCAC--TCTCTGTTGGGTTGTGGGCAGCG----GGAAG-GCCCGCTCTGGCCTGGGCCACCCCTCTG--GGCTGG--------------------TTGAGGGATGGAACCTGGGGCCACCAGCTGAGAATGGGCCAGGTTGCTGCTGTCCCCCGCCCACTCTCT---AGT--AATCCAGGGTCAGGTCC-ACATG---CCCCCAGGGATCTCTGCGAGTAGTTGGGAGGT----------------------------------------------------------------------------------------------------------------------------------------------     
11 Microcebus_murinus-NC_033661.1-162716_162883         80.4%  35.2%    ----------------------------------------------------ATGTGGTGGGCGCTCCTGCTCCTCCCAGCTGGCAGGCCGGGTCCTTCCGGTGACTTCCAGGAAAGGCCC------------------CATGGCTGCCGTGAGCCTGGCTC-----------------------------------------------------------------------------------------------------------------------CCTCTGCAGCTCCTCCGGGGTGTCCTGCGCCTTGG----CGGG--------------------------------------GGCCAGCATCAGCCACGCTCCTGCCTCCAGAGAGCCCCAGGCCAGCCTGGTGTGGGACACCTCCGGGGACAGGGAGCTGTGAAATGGGCTATTAGCAGAGTCCTCTCCCCTACCGGGCTGTCGTATGTGATTAAGGCCACTGCTG----TGAGCTGAGCTGCCACATGTCACGCCGG-------CTGGGGATGGAAAGGGGCAGG------AATGGGGA----GCCCGTTCCAGGAGGGAGCTCAGCTGAGGCCAAGACACGGCC-GGGCCAGCGCAAGGAGGCTCCAGGCTCTGCTGAGAAAG---------GCCAGGT-GTT-GGCCCTCCCTGGGCTGAAGTCACCAGATCCCCGTAGCAGGA-------GG-GA----GGCG-----GA--------------GTGGGGGGTCCT------CTGGGGGCAGGCGGTGGGAGCCACAGCC-----------TCAGGG----------------------------AACGTCCCGTCCACTCGC--------------------------------TGCCATTGCCAACTGCTCGGGGCATCTC-TGAGTGCGAGTTCCTGAC----CATCAG-CCCTTCCCGTGCAGCTGGGAC----------AGCTCTGGACGCCTGTGCCCATCACAAAC-CCTGCTGTTC---AC--TCCCTGTGGGGTGACCCTCGCTCTGGGCTCCGTGGGGGCCCTGATCCTTCTCGTACCAGTGGGGGTGGACCTGACTCT-------------GCTGACCCCCCTTTGTAGAACCGGCAGCGCTGTGGGTCTGACCCTCTCGTCCTCCAAACTCTGCCCTCTGCGGCCGAGTGCCGAGCAGCCTGCCACGCAGAGCGGGCGCAGCTAGAGGAGGAGGGCACATCCGGACACGTG-GGGCGCCGGTCCCTGCTGCCCCC----TGCCCAGGCCTCTCCGGGGATGTCCGGCCGGCCTGCCGCCGCCCCACCGCCCCGCCACCGCCCTGCGCAGCCACGCGGGGTCCTGCCGGGGGGGGGGGCTCAGGGA     
12 Peromyscus_leucopus-NC_051064.1-163815_164069        81.0%  36.1%    -----------------------------------------------------------ATTCTTACTTGCGCTCTTGAGAGAAATCCCTACCCGAATCTGGTGACTTTCC--AGCAGGGGCTCCA-------------CACTGATGACTACAGTCTGACTC-TGTAACAGCTCCTCC-------AAGGTGTCCCGGGC-AGTGGC-TTGGGGTCAGAATCTATCCCAGACAGTGG----CTGATCGCTTGCCTTCAGGAGCC-CA-GC--ACAAGT-----ATGCGTGGCTGCTGACTA-GGCCCTGCTGGAG---GAAGAGAGGGCAGCTGTGGCCTCAGGGAAGTGAGTGGCTGGTGG--------------------CAAAGACAGGAA-CCCCCAGGGACACAGGAAGGAGGGCCACCTGGGGGAGCAGAAAACTGTGAAATGGACTATTAATAGAGTTCTCTTCCTAGCAGAGCTGTCGAATGCGATTGAAGCCACTGCTG----TGAGCTGAGCTGCTACATGCCACCAGCTAGTGA----TAGCCAGGGACAGTGAGAG--GGTAGGAAGGGTACCAGT-TCTGTTCTGGGGAACTCTGATTATGGT-----------CCTGGAGCTCTGCTGGAGATAGAGGAAG--------------------GCCA-GGA-GCTGGGATCTCTGTGGGCTAAAGGTCCCAGG--------CCCCCATGGCCATTGCAGGCATACTTGGAGTTA----------GGTTCGGAGAGACCCGGTTTAGGCCTAAACATGTGGGGACTTCTCTAAGTGGAACTCGGC--------ATTCGGTAGTGGACACTGTTGACCTTCGAGAATGCCCCGTCTCTTTG------------------------------CTGCTACTGTGGCTCCAAGTTG---------------AGTTTCTGAC----CTCTGGCACCTTCACACACAACTTAAT-----------GGCTTTGAACTCGG----------------GTTCATCATCA------CTTCTGTTGGGTTAGGGTCATCA----ATAAG-GCCCTGTGAGTGG--GC--TGGGCTGGG--TAGGGG--------------------CTA-GATCCTGAAGCTGATGCCACTAGCCGAGGATGGACCAGGCTGCTGCCCAGTCTCTGCTGTCCAGG-----------GCCA-----GGTCC-CTGAG---CT-TCAGGAACTTCTGAGAGAAGGTGGGTGGTAGCAGCCC-AGGTCAGCTTGTGGATAGGCAATTAG-TTAGTATGGTGAGTGGAGCACCGT----------------------------------------------------------------------------------     
13 Octodon_degus-NW_004524689.1-168323_168593           79.5%  29.9%    ---------------------GC----------------------------TGGCTGG-----AGAGTCCCAGGACCGGCC----TGGTCCCCGGGCTTTGCTGGCCTTTCCCT----CTGCCCTCAGGCCCCAACTGGCCTTGTCCACTACGAAGCCCCAGCCCCTGCCCCTTTTCTG---------GGAGC----AG-GAGTGGCTCGGGCGCAGGACTCGTCCTGT-----------CCGGATGGCTGCCTCTAGGAAGCCAG-GC-CAGGCAG-----GT-TCTGTCTGCGTG-CCAGGCCCTGTTGGAG----AGCACAAGGCAGCG-AGGCCGCAG-----------------------GGAAGAGTGGCCAGTGGCAG-GGACGGGGGCCCCAGGGACACGGGGATGCAGGGCACCTGCGGGAGCAGGAAGCTGTGAAATGGGCTATTAATAGAGTTCTCTTCCTGGTGGGGCTGTCTAACATGATTAACGCTATCGCTG----TGAGCTGAGCTCTGCATG-CCACCAGCTGGGGACAGAGGGGACCCCGAGGGGCAGGAAGGGGGGCAGCCCT---GGCCTC--------------------CA-------------TTGAGAAGGCAGGGGAAGGTCTGATGTTGG--GGGCTCTTGGGGGTA-----CCATGGCCCTTGTCC--------TCGA-GGTACCTGGAAGAAGCACAGGGTGGGTGTC--------CCGTGTGGGCA---------------GGAGCCAGAAC------CTTGTCCTGAGAAGTGGCTTCCCTGGGG-TAAG------------TGCTGGGCAGGAGACACCCCGGCCTTAGAGAAGTCACTT--CACTCCCATGGGCGA--------------------CGGAGTCCCTGACACTGCTGATCCCTCCATGG--GATGGCCGGCT-GGAGG--CCCTGGGGCTGCCGTCCTGAACCTGGGCT---------GGGTGGGAGCCGGATCAGATGACCCAGATGGCTGCTGTCCTG---------------------GCCAGGCT----GTGCCCATCCCGGGGACCTCTTGTGGATGGGAG--GGGAGG-------CTTGGGCCCTGTGACGG-------CCAGCGGTGCGGGGAGGGAGT-GTGGATGCTGGGT-ACGTGTGCCCGCCCTCTAAGATGT-------GAGCTACCCTGGCCACTCCCAGA--AT-CTGAGCCTGGGGCAGGAAAGAGCAGTGGCCGTGCTTCGGAGCCAGGCGAGGCAGGG--------------------GTCAGGCCCTCCCTAGC------------------------------------------------------------------------------     
14 Cricetulus_griseus-NW_003616165.1-37549_37836        81.2%  35.8%    ------------------------------------------------------------------ATTGCACTCTGGAGTGATATCCCCACCCGGATCTGATGACTTCCC--AGAAGGGGCTGCA-------------CACTAGTGGCTACAGCCTGATTCCTGTGACAGCTCCTCC-------AAGGGTGTCCTGGC-AGTGGC-TTGGGGTCAGAACCTGTCCCAGACGGTGGGTGATTGATCACTTGCCTTCAGGAACC-CA-GC--ACAAGT-----ACGCACGGCTGCTGACCA-GGCCCTGCTGGAG---GAAGAGAGGGCAGCTGTGACCTCAGGGAAGAGAGTGACTGGTGG--------------------CAGAGACAGGAA-CCCCCAGGGACACGGGAATGAAGGCCACCTGGGGGAGCAGAAAGCTGTGAAATGGGCTATTAATAGAGTCCTCTTCCTAGCAGGGCTGTCGGATGTGATTGAAGCCACTGCTG----TGAGCTGAGCTGCTGCGTGCCAGCCTCCAGCTAGTGATAGCCAGGGACAGTGA--G--GGTAGGGAGGGTACCAGTTCCACTCTGGAGGGACTCTGACTGTGGC-----------CTTGGAGCTCCGCTCGAGATAGAGCAAG--------------------GCCA-GAA-GCTGGGACCTTTGTAGGCTGAAGGTACCAGGCTGCCAGGCTGCCAGGGCCATCGCAGGCATTCTTGGAGGCA----------GGCTTGGAGAGACCTGGCTTAGACCTGAGCACATGGGGACTTCTCTAAGTGGAG----GT--------ATTGGGCAGTGGACACTGTTGACCTTCTAGAATGCCCGGTCTATTTG------------------------------CTGCTGCTGTGTGAAGGCTGCGAGT----------TGAGTTCCTGAACTCTGTTGAGTGCCTTCACATACAGCCTAAT-----------GGCTTTGAAGTCGG----------------GCCTGTCATCA------CTGCTGTTGGGTTAGGGTCAGCA----GTAAG-GTCCGCTGAGTAG--GC--TGGGCTGGG--TAGGGG--------------------GCTAGATCTTGAAGCTGCTGCCACTA--TGAGGATGACCCAGGCTGCTGCTCAGTCTCTGCTGTCCAGT-----------GCCAGGTCAGGTCC-CTGAG---CT-GCAGAAACTTCTGAGAGAGGGTGGCAGCTCAG--------GTCAGTTCTTGAATAGGCAAACTA-GCATGCCCCCCTCT--------------------------------------------------------------------------------------------     
15 Nannospalax_galili-NW_008355419.1-157375_157587      83.1%  38.7%    ------------------------------------------------------------TCAGGGCTCTCAAGGAGCACCTGCCCATCCCTTCCAATCTGACGACCTTCCAGAAGAGACCATGAA-------------CATTCATGGCTGAAGGCTGGCTCCCATACCAGCTC---------TGGGGATGTCCTGGGC-AGTGGCTTGAGGACAAGGATCTGTCCCAGACACTGG----CCCGGCACCTGTCTTTGGGAGTG-CA-GC--CCAAGT-----GTGCTTGGCTGTTGGGCTGGACCCTGCTGG---AGGAAGAAAGGGCATCCATGGCCTCAGGGAAGTGAGTAGCTGGTGG--------------------CAAACATAGGGC-CCCCCAGAGACACAGGAATGAGGGCCACCTGGGGGAGCAGGAAACTGTGAAATGGGCTATTAATAGAGTCCTCTTCTTGGTAGGACTGTCGAACGTGATTAATACCACTGCTG----TGAGCTGAGTTGCTACACACCACCAGCTGGTGATGGCCAGGGACAGCGAGGGATAG--GAAGAGTGCCTGGTCTACTCTGCTCCAGAGGGACCCTCTCTGAGGC-----------TGTGGAGCCCAGAGGAGGGCCCACCTGTGC----TGGAGATGAAGGAAGGCCAGATGCTGGGGGCCTCCCTGGGTTGAAGGCAC--------CACACTCCCACAGCTGTTGGAGGCAGCCTGAGAGGCA----------GTTTGGGTAAGGGCCTGGGGCCACCCGAACATGTGGGACC-TCTATG------------GGTGAAGGCACTGAGCAGTGGACACCACTGACCTTAGGGAATGCTCTGTCCATTTG------------------------------CCGCCACTCTGACTGTGAGGAGAGG---------------TCCTGAC----TTTTGGCACCATCCCACAAAGCTTGAC-----------AGCTTTGAACTTGG----------------GTTCATCACTT------CTGTCAGGTGATGG--GTTGACA----GGAAG-GCCCTGTGAGTTCACTGCCTGGTCTGGG--TAGGGG--------------------CT-AGATACTGGAGCTGGTGCCCAG-----------------GCTG--------------CTGCCCACCCCCAGC--AGTCCAGGGCTAGATTC-CCGAG---CT-GTAGCAACTTCTGAGATAAGGTAGATGTTGGCAGCTC-AGGCCAGCTCAGGGATAGACCATTTAGCA----TAGTAAGTGGAGCATGG-----------------------------------------------------------------------------------     
16 Meriones_unguiculatus-NW_018657773.1-161576_161897   80.8%  35.0%    -----------------------------------------------------------------------GCTCTCGAGGGACATCCTTCTCCATGTCTGATGACTTTCC--AGAAGAGGCTACA-------------CACTGGCTGCTACAGCCCGATTCCCGTGACAGATCCTCCTGCT-GTCAGGTGTCCTGGGC-AGTGGC-TTGGGGTCAGAACCTGTCCCAGACACTGG----CTGATCACTTGCCTTTAGGAGCC-CA-GC--CAGAGT-----GTGCATGGCTGCTGACCA-GGCCCTGCTGGAG---GAAGAGAGGGCAGCCATGCCCTCAGGGAAGTGAGTGGCTGGTGG--------------------CAAAGATAGGAA-CCCCCAGGGACACAAGAATGAGGGCCACGTGGGAGAGCAGAAAACTGAGAAGTGGGCTATTAATAGAGCCCTCTTCCTAATGGGGCTGTCGAATGTGACTGAAGCCACTGCTT----TGAGCTGAGCGGCTACGTACTACCAGCTAGTGA----TAGTCAGGGAGGCTGAGAG--GGTAGGAAGGGTGCCTGTTCTGCTTTGGAGGGACCCTTATTGTGGC-----------CTCGGAGCCCAGAAGACAGGGGCTCCCCAGCTCTGCTGGAGGCAGGAAGGCC-AAT-GCCGGGACGTGTGTGGG--------TGAAAGGCACCAGGCTCCCATGGCCATTGCAGGCACGGTTGGAGGTA----------GCGCTG-GGAGAACTTGCTTAGGCCTGAACACATGAGGGCTTCCCTAAGTGGGAGCCCTCACAGGGCACACGGGCAGTGGACACTGCTGATCTTTGAGAATGCCCTGCTCATTTA------------------------------CTGCCACTGTGGCCAAAAGGTGAGC---------------TCCTGAC----CTCTAGAACCTGCGCACACAGCTTAAT-----------GGCTTTGAACTTGC----------------GTTCATCACTA------CTGCTGGGCAATGG--ATCAGCA----ATAAG-GCCCTATGAGTTC--ACCCCTGGACTGG--GGAGGG--------------------GTTAGATCTTGAA------GCTGCCAGCAGTGGATGGGCCAGGCTGATGCCCAGCCCCTGTTGTCCAGG-----------TCCAGGTCCCCAGG-CTGAG---AG-AAGGCGGATGGTGGCAGCTCATGGACAGG------------CCAGTTA---------------A-TTAGCATGGTGAGTGGAGCATGGGTGG-------------------------------------------------------------------------------     
17 Chinchilla_lanigera-NW_004955486.1-165636_165916     80.1%  34.0%    ------------------------------------------------------------------GTCCCAAGGCCAGGGTCTGGCCCCCACGGGCTCTCCTGGCCATTCCCCCGCCCCCCACCAGGCTCCAGACTGGCCTTGCCCTCTGGGAAGCTGCAACCCCTGCAGCTCTTCTG---------GGAAAGCAGGC-AGTGGCTCCAGGGCCAGGACCTGTCCCAT-----------CTGGGCACCTGCCTCTAGGAAGCCAG-GC-CAGGCAG-----GT-TCTGATGTG-TGGCCAGGCTCTGCTGGCG----AGCATGAGGCAGTGGAAGCCTCAG-----------------------GGAAGAGTGGCCGGTGGCAGAGACA--GCGCCCCAGGGACACAGGGATGCAGGGCACCTATGGGAGCAGGAAGCTGTGAAATGGGCAATTAATAGAGTCCTCTTCCTGGCGGGACTGTCTGGTACGATTAATGCCATCACTG----TGAGCTGAGCTGCATGCCACC---AGCTGGGGACAGAGGGGACACTGAGGGGCAGGAAGAGATCTGGGGGG---GGGATGCCCTCCTGGAGGCTGGGTTCTG-------------CTGGGGGGGCAGAGGGAGGCTTGATGTTGG--AGGCCCCTGAACAGAAGGCACCATGCTCCCTGCCA--------CTGGGGTGCCCAGCAGACAGGGTCTCG-------------------TGCGGGCA---------------GGAGCCAGAAC------CCTTGCATGAGAAGGGGCTTGCCTGGGC-TAAG------------TACGGGGCAGGGGACACCCCTGGCCTTAG--GATGTCATTTGCCTCCCACTGCCAGCC-AAGTATCCGTCTGGTGACAGAGTTCCTGCCACTGCCGGGTC-CTGCTGCGGGAGGGTCGGCTGGAGGC--CCCTGGGGCTGCCGTCCTGCATCTGGACC---------GGGTGGGGGCTGGGTTGGAGGAGACAAATTGCTGCCGCTCCCTTGCCCACTCCAGCCGTCCTGGCCAGGTC----GCATGTGTCCCCAGGACCTCACGTGGGTGGAAG--GTGAGG-------CTTGGGCCCGGCGATGG-------CCAGCGGTGTGGGGGCTGGAGTGTGGACGCTGGGGGAAGCGTGCCCATCCTCTAAGATGC-------TTGCTACCCCGGCCACTCCTGAG--GT-CCGAGTGCTCAGAA---AG--------------------------------------------------------------------------------------------------------------------------------------------------------     
18 Microtus_ochrogaster-NW_004949136.1-163271_163525    78.2%  30.9%    ----------------------------------CAGCCGGGCAGGATTGGCTCTTCTTGTTACAACTTGCACTCTTGAGAGAGATCCCTACCTGGATCTGATGGTTTTCC--CGAAGGGGCTCCA-------------CACAGATGGTTACAGCCTGCTTCCCATGACAGCTCACTCCTCC-AA-GGGTGTCCTGGGC-AGTGGCTTGGGG------------------------------------TCAGACCTGTCCACC-TT-CA--GGAACC-----CAGCATGGCTGCTGACCA-GACCCTGCTGGAG---GAAGAGAGGGCAGCTGTGGCCTCAGGGAAGTGAGTGACTCTTGG--------------------CAAAGATAGGAA-CCCCCAGGGACACAGGAATGAGGGCCACCTGGGGGAGCAGAAAGCTGTGAAATGGGATATTAATAGAGTCCTTTCCCTAGCGGGGCTGTCGAATGTGATTGAAGTCACT----CCTGTGAGCTGAGCTGCTACATGCCACCAGCTAGCGA----TAGCCAGGGATAGTGAGAG--GGTCGGAAGGGTACCAGTTCTGCTCTGGAGCTACCCTGACTGTGGC-----------CTTGGAGCTCTGCTAGAGAAGGCCA----------------------------GAA-GCTGGGACCTCTGTGGGCTAAAGGCGC--------CAGACCCCCATGGCCATTGCAGGCATAGTTGGAGGCA----------GGCTTGGCGAGACCCGGTTTAGACCTGAACATGTGGGGACTTCTCTAAGTGGAGGCCTTGGG----------AAGTGTGGACACTGCTGACCTTTGAGAATGCCTTGTCTGCT-G------------------------------CTGCTACTG------TGGCTGCAGC----------TGAGTTCTTGAC----CTCAGACGCCTTTGCACGCAATGTGAC-----------GGCTTTGAACTTGG----------------GTTCACTGTCA------CTCCTCTTGGGCTAGGGTGAGCG----GGCTG-GAC----------------------TGG--GTTGGG--------------------GCTAGGTCCTGAAGCTGGCACCACCAGCTAAGGATGGGCCAGGCTGCTGCCCCGTCTTCGCTGTGCAAGGCCA----------------GGTCC-CTGAG---CT-ACAGGAACGGTGGCA------------------GCTT-AGGTCAGCTTGTGGATGGACAAATGAGTTAGCATGGTGACTGGGGCATGGAGAGCCTGTTTCTACCCTCTAGGCTGCTCATATCCTTGGCCACCC--------------------------------------     
19 Fukomys_damarensis-NW_022900935.1-167528_167787      79.1%  31.2%    ------------------------------------------------------------------GGCCCAGGGCTGAGCTGTGACCCTCAGGGGCTCTGCTGGCCATGTCCT---CCACCCCAGAGCTCTAGTCTAGCCATGCTCTCTGGA-AAGCCCCACCCCTACATCTCTTCTG---------GGTGGCCAGGA-AGTGGCTCAAGGGCCAGGACCCGTCCCAT-----------CTGGGCACCTGCTTCTAGGAAGCCAG-GC-CAAGCAG-----GT-GCTGTCTGCTTAGCCAGGCCCCGCTGGAG----AGCGAGAGGCAGCGGAGGCCTT-G-----------------------GGAAGAGTGGCTGGTGGCAGGAAAAGGAGCCCCCAGGGACACAGGGATGCAGGGCACCTGCAGGAGCAGGAAGCTGTGAAATGGGCTATTAATAGAGTACTCTTCCCGGCGGGGCTGTTGAACGTGATTAATGCCACCACTG----TGAGCTGAGCTGCTGTCTGCCACCAGCTGGGGACAGAGGGGACACTGAGGAGTAGACTGCACTCTG-------------------------------------------------CTGGGTGGGCAGAGGAAGGCCAGATGTTGG--GGAGTCT-GATTGGAAGTCACCACGCCCCCGTCCA--------TCAAGACGCCTGGGAGACAGCGTGGACTGAGGGCC--------CCATGTGGGCC---------------GCATGGGGTGA------GGGT--CCCG-TGTAGGTTTCCCCGGGG-TAGG------------TACTGGACAGGGGATGACTCTGGCTTTACAGAATGTCATCTTGCTGCTGCCACCAGCCAAGTGTACCGTCTGGTGTCAGAGTGCCTGACACTGTCTGGTCCTTGCTGCCAGAGAGCCAGCTGGAAGC--CCCTGGGGATGACATCCTGCCTCTGGACT---------GGGAGGAGGCTGGCTTGGATGGGCCAAGTTGCTGCTGTACCCCTGCCCACACCCTCCGTCCAGGCCAGGCT----GCATGTGTTC-CAGGACCTCACATTGGTGTAAG--GTGAGG-------CTTGGGCCTGCGGATGT-------CCAGTGGTGCAGGGGACAGAGCATGGACTCGGGGTGACC-GTGCCCAACTCTAAGATGCA--------TGCTCCCTGGCTTGTCAGAGGC--AG-CCCTGGCTTGCTGA---CTGGTCACTG-------------ACCATGGGATGGGCA--------------------------------------------------------------------------------------------------------------------     
20 Grammomys_surdaster-NW_021620991.1-160727_160990     78.5%  33.7%    ---------------------------------GAGGCAGCAGGGTAGGCCTGGTTCTCATTATTACTCGTGCTCTCGAG----------------------------GGA--CATCCCCACCCAG-------------ATCTGATGGCTACAGCCTGATTCCCATGACAGCTCCTACAA------AGGTGTCCTGGGC-AGTGACTT-GGGGTCAGAATCTGTCCCAGACAATCT----CTGATCACCTGCCTTCAAGAGCC-TA-GC--CCAAGT-----ATGCATGGTTGTTGACCA-GGCCCTGCTGGAG---GAAGAGAGGACAGCTGTGCCCTCAGGGAAGTGAGTGGCTGGTGG--------------------CAGAGACAGGAA-GCCCCAGGGACACAGGAATGAGGACCACATGAGAGAGTGGAAGACTGAGAGATGTGTTATTAATAGAGTCCTCTTCCTAGCGAGGCTGTCGAATGTGATTGAAGCCGCTGCTG----TGAGCTGAGCTGCTACTAGCTAGTGATAGCTGG-----------GGATACTAAGGG--AG-TCTAAAGGTACCTGCTCTGCTCTGGAGAGACCCCAATTGTGGC-----------CTTAGAGCCCAGAGGAAGCCCAAGCTCT----GCCAGAGACAGAGGGAAGCC-AAT-GTTGAGACCTCTGTGGGTTAAAGGACCCAGGGCCCTGTGGCCACTGCAGGCGGTCTGTTTCCTTTGGAGGCA----------GGATTGGAGGTACCAGGTTTAGGCCTGAACATGTGTGGACATCTCTAAGTAGAAG------------CACTGGGCAGTGGATACTGCTGACCTTTGAGAATGCCCTGTTTAATTG------------------------------CTGCTACCGTGGCTGTAAAGGTGAG--------------TTCCTGAC----CCTCGGCCCCTTCACACACAGCTTAAT-----------AGCTTTGAACCTGG----------------GTTCATCACTC------CTCTTGGCTAATGG--ATCAGCA----ATAAG-ACCCTGTGAGTTCACCCTCTGGGCTGGG--TAGCGG--------------------TTAAGATCTCGAAGCTGGTACCACCAGCAGAGGATGGGTCAGGCTGCCATTCGCTGGGCAGGACCCATCCTCTGC--CATCCAGGGCCAGGTCC-CCAAG---CT-GTAGGGACTTCTGAGAGAAGGTGGCAGCTCA--------GGTCAGCTGCTGGTTAATTAGTATG-----------------------------------------------------------------------------------------------------------     
21 Cavia_porcellus-NT_176233.1-169158_169440            80.3%  32.1%    ---------------------------------------------------------T-----TGAGTCCTAGGGCTGGGGTCTGGCCGCTAGGGGCTCTGCTGGCCATACCCT---CCATCCCCAGGCTCCAGACTGGCCCTGCTCTCCAGG-AAGCTGCACCCCTGCAGCTCTCCTG---------GGCAGGCAGGC-AATGGCTCTGGGGCCGGAACCTGTCCCAG-----------CTGGGCCCCTGCCTCAGGGAGCCA-G-GC-CAGGTGG-----GT-GCTGCCTTCACGGCCAGGCCCT-GGGGAG----AACACAAGGCAGGCAAGGCCTCAG-----------------------GGAAGTGTGGCCAGTAG---GGGGATAGGAGCCCCAGGGACCAGGGATGCAGGGCACCTGCGGGAGCTGGAAGCTGTGAAATGGGCTATTAATAGAGTCCTCCTCCCGGCGGGGCTGTCGGACATGATTAATGCCACCGCTG----G-AGCTGAGCTGCTGTGTGCCACCAGCTGGGGACTGAGGGGATGCTGAGGGGCAGAAAGGGACCCACTGGG---GTCCTCCTGG------AGATGGGCTCT--------------GCTGGGGGGCAGAGGAAGGCCCAGTGTTGG--CGGCTGCTGAGCAGAAGGCACACACA-CCCTGCCA--------TCGAGGCCCCTGGAAAGACAGCATGAGTGGGGGTC--------CTGTGTGGGCA---------------GGAAGCTGGAC------CCCAGCGTGAGAAGGGGCTTCCCCAGAA-TAGG------------TGCTGGGCA-GGGCACCGCCTGGCCTTAGAGAATGTCGTTTTGCTCCTGCTGCCAGCCAAGTGCACCGTCTGGTGACAGAGTTCCTGACGCTGCTGGGTCCTGCGGACCAGTCGCTGACCCTGGGCT--CAGCAGTGGCTTCTGTCTCAC--TGCCCT---------TGCT-----CTGACCCTAAG-GCCCTGGCTCTGGCGCCCTGGCGGCACCACCCCAGGGTCCTGAAGGGGGAGGGCTGGAGGGAGCCGACTCACGCTCCCTGATAAAGT--AAAAAT-------AGTTGGGGAGGAGGCGC-------CCAGACGTGCGGGGGGACTCG--TCGCTTCTCCCAGCC--GTTTAAATAATCTCGGCCA------------TATGTGTGTGGGCCCGTCC--CT-CCCTCCCTCCCTAA---GGCGGCGGT-------------------------------------------------------------------------------------------------------------------------------------------------     
22 Jaculus_jaculus-NC_059106.1-158266_158512            81.8%  35.4%    ----------------------------------------------------------------CTGTAACCCCCTCTGCCCCTCCCCACTACTGAGTCTGATGATTTGTC--AGGAAGGGCCCCA-------------CCCTGGTGGCTACAGCCTGGGTCTCATGCCAGCTCATCAAGAA-CA----TCTTAAATAG-TTGTTTGTGGAGGCCATGACCTGTCCCAAGCATTGG----CTAGGCACTTGCCTTCAGTGAGTCCA-GC-TCAGGTG-----TTGCATGACTACTGGGTCAGGTCCT-----GCTAAAAGAAGAGAGAAGATGTGGCCTCAGGGAAGTGAGTGGCTGGTGG--------------------CAGCGGCAGGAGCCCCTAAGGGACATAGGAATGAGGGCCACCTGGGGGAGCAGTAAACTGTGAAATGGGCTATTAATAGAGCCCTCTTCTTGGAGGGACTGTCGAATGTGATTAATGCCACTGCTG----TGAGCCGAGCTGCCACACAATACCAGCTGTGATGGCCAGGGATAGGAAGAAGACCC----------------------TGCTGTGGAGGGGTCTCCACTGAGA-------------TTACAACTGGGCACAGGACAGAAGGCT-------------------------GCACATTGGAGCCTACCCGGGCTCA------------------------AGGCCATTGCAG------------GCA----------GGCTGG--GAAAGCCTGAGGCCACGTAAATGTGTAGAGACTTCTCTAG------------GTGGAGACACCAGACAGTGGACACTGCTGACCTTAGAAAATGTCTTGTCCACTTG------------------------------CTGCTACTGTGGCTGTGGGGAGAAG---------------ACCTGAG----TCTTGGCACTTTCCCACACAACGAGAC-----------AGCTTTGAACCGGG----------------GTCCCTCTCCC------ATGTTGTGCAGTGG--GTCAGCA----AGAAG-GTCTTGTGAACCCCATCTCTGGGCTAGG--TAGGGG--------------------C-TGGATCTTGGAGCTAGTGCCACCAGCTGAGGATGGGCCGGGCTGCTGCCCACCCTAGCTAT-----------------CCAGGGCCAGGTCC-CCATG---CT-GCAGGGACCCCTGAGAGATAATGGATGGTGGTGGCTC-AGGCCAGGGGTGGGATAG---------TTACTGTAATGAGTAGAGTGTGGAGAGCTCATTTCCACCCTCTTGAGTGCTCAAGTTCCTGGCTGCTCCAGGCACCTGAATGCT----------------------     
23 Mus_caroli-NC_034573.1-162221_162495                 80.3%  34.8%    ---------------------------------GAGACAGCAGGGCAGGTCTGGCTCTCATTATTAGTTGTGCTCTTGAG----------------------------GGA--CATCCCCACCCAG-------------ATCTGATGGCTACAGCCTGATTCCAGTGACAGCGTCTACAA------TGGTGTCCTGGGC-AGTGACTTTGGGGTCAGAATCTGTTCTAGACAGTGG----CTGATCATTTGCCTTCTAAAGCC-AA-GC--CCAAGT-----ATGCATGGATGCTGACCA-GGCCCTGCTGGAAGAGGAAGAGAGGGCAGCTATGCCCTCAGGGAAGTGAGTGGCTGGTGG--------------------CAAAGACAGGAA-CCCCCAGGGACACGGGAATGAGGACCACATGAGAGAGCGGAAGACTGAGAGATGGGTTATTAATAGAGTCTTCTTCCTAGCGGGGCTGTCGAATGTGATTGAAAACACTGCTG----TGAGCTGAGCTGCTACCAGCTAGTAATAGCCAG-----------GGATGCTGAGAG--AG-TTGAAAGGTGCTTGCTCTGCTCTGGAGGGACCCTGATTGTGGC-----------CTTGGAGCCTAGAGGAGG-CCCAGCTCT----GCTGGAGATAGAGGAAAGCC-AAT-GTTAAGACCTCTGTGGGCTAAAGGAACCAGGCCCCCATGGCCCCTGCAGG----------CATTTGGAGGCA----------GGATTGGAGGGACCTGGTTTAGGCCTGAACATGTATGAATATCTCTAAGTGAAAG------------CACCAGGCAGTGGATACTGCTGACCTTTGAGAGTGCCCTGTTTATTTG------------------------------CTGCCACTGTGGCTGCAAAGGTGAG--------------TTCCTGAC----CCCTGACCCCTTCACATACAGCTTAAT-----------GGCTTTGAACCTGG----------------GTTCATCACTC------CTCTTGGCTAATAG--ATCAGCA----ATAAG-GCCCTGTGAGTTCACTCTCTGGGCTGGG--TAGGGG--------------------TTAAGATCTTGAAGCTGGTACCACCAGCAGTCGACAGGCCAGGCTGCTACCC--------------AATCACTGC--GGTGCAGGGCCAGGTCC-CAGAG---CT-GTGGGGACTTCTGAGAGAAGGTGACAGTTCA--------GGTCAGCTCATGGATGGACCAGTTCGCTAGCGTGGCGAGTGGACAG--------------------------------------------------------------------------------------     
24 Rattus_rattus-NC_046154.1-161190_161444              82.9%  36.6%    ----------------------------------------------------------AATTATTGCTTGTGCTCTCGAGGGACTTCTCTGCCTGGGTC---TGGCTTTTC--AGAAGGGGCCTCA-------------CAGTGGTGGCTACAGTCTGATTCCCGTGACAGCTCCTACAA------AGGTGTCATGGGC-AGTGACTT-GGGGTCAGGATCTGTCCCTGACGATGG----TTGGTCACTTGCCTTCAGGAGCC-CA-GC--CCAAGG-----ATGCATGGTTGTTGATCA-GGCCCTGCTGGAG---GAAGAGAGGGCAGCTGTGGCCTCAGGGAAATGAGTGGCTGGTAG--------------------CAAAGACAGGAA-CCCCCGGGGACACAGGAATGAGGACCACATGAGAGAGCGGAAGACTGAGAGATGGGTTATTAATAGAGTCCTCTTCCTAGCGGGGCTGTCGAATGTGATTGAAGCCACTGCTG----TGAGCTGAGCTGTTACCAGCTAGCGATACCCAG-----------GGATACTAAAAG--AG-TCAAAAGGTGCCTGCTCTGTTCTGGAGGGACCCTGATTGTGGC-----------CTTGGAGCCCAGAGGAGGTCCCAGCTCT----CCCGAATACTGGGGAAAGTC-AAT-GTTGAGACCTCTGTGGGATAAAGGAGCCAGGCCCCCATGGCTACTTCAGGC--------ACCTTTGGAGGCA----------GGATTGGAGGGACTCCGTCTAGACCTGAACGTGTGTGAATACCTCTAAGTGGAGG------------CACCGGGTGGTGGATACTGCTGACCTTTGAGAATGCCGTTC--ATTTG------------------------------CTACTACTGTGGCCGTAAAGGTGAG--------------ATCTTGAT----CC------------CGGGCCCATTAAT-----------GGCTTTGAAGCTGA----------------GTTCATCACTC------CCATTGACTAATGG--ATCAGCA----ATAAG-GCCCTGTGAGTTCACCCTCTGGATTGGG--TCGGGG--------------------TT-AGATCTTGAAGCTGGTACCACCAGCAGAGGATGGGCCAGGCTGCTTCCC--------------AGCCTCTGC--CATCCAGGGCCAGGACC-CCGAG---CT-GTGGAGACTTCTGAGAGAAGGTGGCAGCTCA--------GGTCAGCTCATGGAGAGGCCAGTAAATCAGTGTCACGAGTGGACAGTGGATGGCCAGGCAGA----------------------------------------------------------------------     
25 Arvicola_amphibius-NC_052052.2-163378_163647         76.5%  29.6%    CGTCCCTCCTGGCTGGTCTGGGCTCCAGGGTGAGCAGCCGGGCAGGATTGGCTCTTCTCGTTATGACTTGCACTCTTGAGAGAGATCCCTGCCCGGATCTGATGGTTTTCC--CAAAGGGGCTCCA-------------CACAGATGGTTACAGCCTGTTTCCCATGACAGCTCACTCCTCC-AA-GGGTGTCCTGGGC-AGCGGCTCCGCC------------------------------------TTC---------------------------------------------AGGA-GCCCAGCATGGAG---GAAGAGAGGGCAGCTGTGGCCTCAGGGAAGTGAGTGACTCTTGG--------------------CAAAGACAGGAA-CCCCCAGGGACACAGGAATGAGGGCCACCTGGGGGAGCAGAAAGCTGTGAAATGGGATATTAATAGAGTCCTTTCCCCAGCAGGGCTGTCGAGTGTGATTGAAGTCACTCACTTCTGTGAGCAGAGCTGCTCCATGCCACCAGCTAGCGA----TAGCCAGGGATAGTGAGAGGGGGTAGGAAGAGCGCCAGTTCTGCTCTGGAGCGACCCTGACTGTAGC-----------CTTGGAGCTCTGCTCGAGATAGAGG----------------------------AAG-GCCAGAA-----------------GCT--------GGGACCTCTGTGGCCATTGCAGGCACACTTGGAGGCA----------GGCTTGGAGAGACCCGGTCCAGACCTGAACATGTGGGGACTTCTCTAAGTGCAGGCGTTGGG----------AAGTGTTGACATTGTTGACCTTCGAGCATGCCCTGTCTGCT----------------------------------GCTACTG------TGGCTGCAGT----------TGAGTTCATGAC----CTCTGACGCCTTCGCACGCAACGTGAT-----------GGTTTTGAACTTGG----------------GTTCACCGTCA------CTCCTCCTGGGCTAGGGTCAGCA----TAAGG-CCCTGTGAG------CAGACTGGACTGG--GCCGGG--------------------GCTAGATCCTGAAACTGGCACCACCAGCTAAGGATGGGTCAGG--------------CTGCTGTGCAAAGCCA----------------GGTCC-CTGAG---CT-GCAGGAACGGTGGCG------------------GCTT-AGGTCAGCTCGTGGATAGGCAAATGAGTTAGCATGGTGACCGGGGCATGGAGAGCCTGTTTCTACCCTCTAGGCTGCTCATATCCTTGGCCGCCCCAGGCATCTGAACGA-----------------------     
   clustal                                                                                                                                                                                                                                                                                                                                                                               .                                                                                                                            .  *        *  .:. . :   :. :..*       *      . .***    . . ** *.* .               :.    *                                                                                                             .           .                                                                                                                                                             .           .                                                                                                                                              *                                                                                                                                                                                                .                                                                                  .