Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%

                                                              cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .     ] 1546
 1 Target                                                  100.0% 100.0%    -------------------------TCCT------------------------------------------------------------------------GTGTGGGAAAGGCGAGTGGGCG-----CGGGCC-TC-CCGTGT-GGGGGCAGGGTGGAGTTGGTGGAC--ACCATCCCCAGGACAGGACGTTTCCTCTGGC---TCCTGAGAAGTCACTCACCGTGGTGGCCGCAGGCATGGCTCCATGC---TAGCTGG---------G---------------------------------------TGAAGAC----CCCGAGAGG-GGGCCTTGTGGCTGACGGTCACTGGA----------GACAACAGTGAGCCACTCTGGTGGGAC-TGTGGAACCCCCTCCAGCTCTGCCCCAGAGAGCAGCACCTGGGTGA---------GGGCTACAGGAGGCTCTTT-------CAGCAGGCAGGTCC-CAGGCACCATGATGCAGCCCTGA--CTTGGGGACG-GTGGCCACACTGTCC-TGGGAGTAGGTCCCT------TCCACCGCTCA-GACCT---GGC---GACC-----------------------CAGGAACACACCTCTG-AGGGACTTGAGTGGTCTTGAT--------TTCACATTGATCAG-GCCCC-------TG---GCTG----C-TCCG-ACTTTCAGGTCCCTGTT--GTGGA------------GGTTTCGG----------G-CGG----------CCCAGTTCTCAGGG-GCAGCC-CTGTGCC------CTTC----CTGGGTCAGCTGGTGTG-TGGGTG--GGGGCCGACCCAGGGAGCACCTCACTGGCTCCCAAAAGGCAGGAGTGGGAGACAGGGCAGCCA-----------GCCCAGC-CC-----------CAGGGCCAGCTTGAGCAGG-GAGGTCCAGA----CAGGGACGGAACGACTATA-----CAA------------GATCCCAGAAACTTCAGGCAGGGAAGCTCAGA-GGGCCAGCTCC---------------------------ATCTCCAGGACAC-C---------CTCTCTGTCTGA----GACTCTCTGGCA-GAGCATTC---------G--------------------------------------TGGGGCTGCTCCCCGGCCTGGCAGTGGCCCGGGGTGCTCTGGCCGGGAAGAGCAGCCCCGTG--CCGGGACGG--AT---GTGGCGGGCTCAGCCTCCTGTTTCCTCGCCT--CCTCCGTGGCTCCATGCCTGCTCTGCCTGGCAGCG------------GCCCAGCTGCCACCCTCC---CTCCCGCGCCT--GGCTAT-------GGGCTGGGGGCAGGGCTGGCTCTGACCAC------TTGGCCCGAGGACCCTCCCCTTGGAGCTGCAGCCCCCTCCCCTCAC--------------------------------------------------------------     
 2 Propithecus_coquereli-NW_012152752.1-165282_165527       85.3%  37.4%    --GCAGTGGCTGGGAGCCACCCCCCACCT------------------------------------------------------------------------CCGTCCCCTGGCCACAGCAGCATGTCTTAGCAG-TCTCCACGTGCAGCGGAGGACGGAGCAGATGGGC--CGGTGTCCTGGGTCTGGCCCTCCATCTGCAC---AGCTAATGAGCTGATGACGATGGTTTCCCGGCTCTTGGCACCTTCTGGAGAGCCGT---------G---------------------------------------GGCCGGCCCTGTCCCGGCAGTGCCCCTCCTGAGGGCAGGCCTGTGG------------------------GGGGTGCAGGGGCC-TCCTGGGGGCCAAGCCC-------------AGGGGCCCCACAGTCACAGGG----CGGCTGGGGGAG---GGGA-------CGCCAG---------TGAGTAACTGCATGAGCCTGTTC--CCTCCTGGGATCTTGCTTCCAGCACCGCGTACGTGGGCTCCTGCTGGCTGGACAGACTT-CCTGT-GTGGGAAAGGGTCAGGCACGGGCCCTGCATCCACCCG----------------------------GTGAAGGCCTGGGCGTGGGAC-G----------------------------------------------------------------------------------------------T-GGC----------CACAC-TGCGCGGGGCCGGGTCTCTTCCG------CCTG----CTCAGACCCTTGCGCGG--CCCAG--GCCACATTCCGAGGGACTTAGC---CGTCT---CCCCGT---------CACACCGGGCAGGCT-----------CCGGCTGCAC-----------CATTTCCTCCTGAAGCTCC-ATGGCACTGA----CTTTCAGACCCCTGATTTT-----GGGCAGCCCTTGCCCTCCT-GGGTCAGTGGGGGCAGGGAGAGCTGTG-CTGGCCCCCCA---------------------------AGGGCAGGAGGCACC---------GATGGGGGA-------CCCGCGAGAGCAGGGGCATCGGGGCGGGGACACGT-----------C-ACAGGATGCTGGGATGCTCGAGGAAGCTGCTCCTG-GCCTCGCGGTGGCCCG-GGCTGCCTGGCCTGGCGGAGTGGCCCAGCG--CCCGGGCACGGATCCCATGG-CCCGGCCACCTTCCGTTTCCTCGTCT--CCTCTG-TGCGCCGTGCCTGCCCTGCCTGGCGGCT------------GCCCAGCTACCACCCTGCTTCCCCGCCTGGC-GGGGCTCT-------GGGGTGGGGGCAGGGCTGGCTCCACACAC------ATGGCCTCCGGGGCCCTCCCCTGGAGCTGCAGCCCCTGCCCCAC----------------------------------------------------------------     
 3 Otolemur_garnettii-NW_003852462.1-162643_163096          91.7%  49.4%    ----------------------------------------------------------------------------------------------------------------------------------------A-CAGGGT-GGGCTGGGGGAGGGGATGGGAGTG--AGTAATTTGATGAGCCAGTGTCTTCCTAGGGATTTGCTTCCAGCACAGCATACGTGGGCTCCTGCTGGCTGGACAGACTT-CCTATGTGG---------G---------------------------------------ACAGGAG----CAGGCAGAATAGGGTTGGTGAGCACCACCCCCAGGA----TG----TTCCATATGAAGCCGCCCACCTGGGCAGCCCTGGGCTTAGGACCCCCATGTCCACCAGGTGAAGGCCTGACGGTGCAGCAGGATAGAGAAGTGAGGTGCTCA-------GGGGCTCACGGGATCACAGCAGCAGGTGGAGCCTCTGA--CGTAGGGATA-GTGGACCATGCTGCCCTGGGGCTGGGTCCCC------TCCTCTGCTCA-GACCCAGTGGCCCAGGCC-----------------------CTCC---CCACCATCA-CTGGACTCCAACTGCCTCCAT--------CTCACACAAGTCAGCCCCGCCTC--T-CC---ATTTCCTTC-TGAA-ACTTTGTGGCACCAGCTTTTGGAC------------CCCTGGTT----------T-CAG----------CTTCATTCTCAGGG-GAGCCC-CTGTCCT------CCT-------GAGTCAGCAAAATGA-----GG--AACACAGCCCTGGGGAGAGCCCCACTGGCC-CCCAAAAGCAGGAGGCACAGACAGGGCAGTCA-----------ACTCAGGCCC-----------AGGGGAACCGGGGAGGGGC-TAGG---------------------CCACGTCA-----CAA--G---------ATGCTAGTAAACTTGAGGCAGTGCAGCATGGA-GGGCAGCTCTG-----------------------------TTTCTCAACAT-G---------CTTTTTGTCTGA----GTCTCTCTGTAA-CCTTCCCA---------GGGCT-----------G-TGGAGACTCTGGGGGTCTTGAGGAAGCTGCTCCTG-GTCTTGTGGTGGCCCAGGC-TGCCTGGCCTGGAGGAACGGCCCAGTG--CCCGGGCACTGATCCCAGAGGCTCGACCGTCTTCTGTTTCCTCCTCT--CCTCGGCGGCTCTGTGCCTGCTCTTCCTGGCGGCTGCC------------CAGCTGCCACCCTCCCTCCCCTGTCTGGCCAGGATCT-------GGGGAGGGGGCAGGGCTGGCTCTGCCCACACAGCCTT--------GAGCCCTCCTTTGGAGTTGCAGCCCCTAA---------------------------------------------------------------------     
 4 Galeopterus_variegatus-NW_007727608.1-228627_228950      90.8%  52.4%    ----------------------ACTTCCT------------------------------------------------------------------------GTGTGCGGAGGGTGGGTGGGCA-----TGGACC-TC--CTGCT-GGGGTGGGGGAGGGGGCAGTGGAC--ACCCTTCCCAGCATGGGATGTTTTCTCTGGC---TCCTGGGAAGTCACCCACCTGGGCAGCCAAGGACATGGGGGTCCCC-ACCAGCCAG---------G---------------------------------------TGAGGGT----GGCAAGCTGGGACCTGCATGGTTGACGGTCACAGG-----------------AGAGAGAAGCTTGCTTGGGTC-CTCTGGAGCCCCTCCAGCTCTGCCCCAGAGGGGGAACCCAGAGGG----------GGCCTGAGGGAAGCACTGT-------CAGCAGACAGGTCCTTAGGCACCAGGATGGAGCCCCAA--CTTGGGGACA-TTGAACTGCACTGTC-C-GCAGTGGGCCCAGGGGAGCTGTCCCAATCT-CACAT---TGCCCAGACC-----------------------CTGGGCCCTGCGTCCG-CCCAGCTGC-CCTATTTCCTT--------CTGAAACTCTCCACGGCTCC-------GA---TGTTCAGCC-CCTG-TGACTGAGCTGACCAAA--GGCTG------------GGTTTTGG----------G-GAG----------CCCAATTCTCAGAG-GCAGCCCCTGTGCC------CCTC----CTGGAGTAGCTCAGTGGGTGGCAG--GTGGGGGAC----------CAACCCTGAAGGGCAGGAGGCAG-------AGATGG-GCAGCTG-----------GCCCAGCCCC-----------CAGGGCTGATGTGAGCAGG-GTAGGA-----------------GTTGGACAGA-----GCC------------TGGGCGAGAAACTTTAGACAGTCAAACTTGGA-AGGCCAGCCCG----------------------------TTTCCGGAGCTT-C---------CTCTCTGTCCAA----GGCTTGCGGTGG-CGGACGGA---------G--------------------------------------CGGCCAGCGCCCAGGG------CCTGGCCGCGTGGGCTCAGC-------------------------------------------------CTTCTTCTATTTCCTCGTCT--CCC-CATGGCGCTGTGCCCGCTCTGCCCAGTGGCCACTCGGC---CCTGCCAGCTGCTGTCCTCCTTCCCCCAAGGCCT-GGGCTCTGGGGGTGTGTTCAGGGGGCAGGCTGGCCCTGCCCACTGGGCGGCCAACTCAGGACCCTCCCCTTGGAGCTGCAGCCCCCTGCCCCTCCCTCGATGGGAGCTGCCTCTCCTTC---CCACAGGCAGGC-----------------TGGGCT     
 5 Microcebus_murinus-NC_033661.1-162542_162708             86.7%  36.7%    ---------------GCCCCTGCCCGCCT------------------------------------------------------------------------CCGTGCCCTGGTCACAGCAGCCTGTCTTAGCAG-TCCCACGT--GCAGCGGAGGACGAGCAGATGGGC--CGGTGTCCTGGGTCCGGCCCTCCATCTGCAC---AGCTAATGAGCTGATGACGATGGCTTCCCAGTTCTTGGCACCTTCTGCAGAGCCGT---------G---------------------------------------GGCCGGCCCTGCCCGGGCGGTGGCCCTCCTGGGACAGG-CATGGGG------------------------GGAGTGCAGGGGCC-TCCTGGGGGCTGAGCCCAGGGGCTGGGCAGGGGCTGGCCATAGACACAGGG----AGGCTGGGGGAG---GGGA-------CGGCAG---------AGAGTAACCGCACGAGCCTGTTC--CCTCCTGGGGTCTTATCTCCAGCACCGCGTACGTGGCTCCCG-CCAACTGGACAGACTT-CCCAT-GTGGGAAAGGGACAGGCACGGACCGCGTGGGGTTGGTGGGCACCACCCCAG-GAGGGAGTGACTTCTCTGGCCCCTGGATGCCACC-G----------------------------------------------------------------------------------------------T-GGC----------CACCC-TGCCCGCGGCCGGGTCTCCTCCG------CCTG----CTCAGACCCTCGTGCGG--CCCAG--GCCACACGCCCAGGGACTCGGCCAGAGTCT---CCATGT---------CACCCCGGCCAGGCC-----------TGGGCTGCGC-----------TATTTACTCCTGAAGCTCC-ATGGCACCGA----CTTTGAGACCCCTGATTTC-----GGGCAGCCCCTTGCCCTCCTGGGTCAGCGGGGGCGGGGCAGACGCAG-GGAGAGCCGCG---------------------------CTGGCC--CCCACAG---------GGGACGGGG-------ACCCGGAAAGCAGGGGGATTGGGGCAGGGCCAGGT-----------C-ACAGGATGCGGGGACGCTCGAGGAAGCTGCTCCTG-GCCTC----------------------------GCAGTGGCCCAGCG--CCCGGGCACGGGTCCCATGG-CCCGGCCGCCTTCCGTTTCCTTGTCT--CCGCTG-TGCGCTGCGCCTGCCCTGCCTGGCGGCT------------GCCCAGCTGCCACCCTCCTTCCTTGCCTGGCCGGGGCTCT-------GGGGTGGGGGCAGGGCTGGCTCCACGCAC------GTGGCCTCCGGGACCCTCCCGAGGAGCTGCAGCCCCTGCCCCGC----------------------------------------------------------------     
 6 Equus_asinus-NC_052181.1-172240_172466                   73.4%  28.4%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGG-GGGGTTTTCTCTGGCTCCTGGGAAGC----CG---TGGGGAGAGGAAGTCTCCCGCCCGGGCAGCCCCCCACCAGCCA------------------GGG--GCAGTGTGCTCTGGAAGACCCAGGGCGGAGCCTCGTG-----------TGCTGGACGGTCAGCCAAAGTGGGG---GGGGAAGCTGCTCTGAGAGTCCACCTTC-TGAAG-CAGCACTGGGGGCCCATGGACCCCGTCAGGC--TCTGT-GTCCCCAGGGTGGGGGAATCAGGTGGGGTGCCTG----AGGGCGGCTCCAT-CAGCAGGCAGGTCCTTAGGAGCCACGATGGAGCCCCTGACTTGGAAACAGTG---GCCACACTGCCCTGG-GGTCCCCTCAGCCTGCTCAGATCCAGGG-TCCACAAACA-TGCTGCCAGGTGGCTCGGGGGGGGCTCGATTT--CACATTGATTGAGA-GCCGGCTTGGCCTCA----------------CGTCAGCTGAGCTGTTGCTCC-----------CTTTGGAAACT--CCCTGGGGTTCAGGCCT-----CTGTAGTCGACCACAGGCTGGGGTTCGGGTGGCTCCTCCTGAGCTCCCTCCCAGGTCAGCGGCA-GTGAGTGTGGGATGGCATGGAGGGGAGCCAGGGTGAGACCCAGAGAGGGCCCACCTGGCCCCACAGGGCAGGAG-GCAGGGACAGGCAGCC-AGCCCAGTCTCCAGGCAGGAGTAAGGTG-GG--------GGTCATGTGTGAGATGTGGGAAAACTTAGGATGT---CAATCCTAGAGGGCCTGGCCCGGTTCGAGAACATCCT-----CTCCATG-CTGTGGCCCCAGGGCTCTCGAGGAAGCTGCCTCCT-G--------CCTCTGAGGTGGCCCTGGCAGGGAGGGGCACCGGG--C-----CTAGGATGGATGCACAGGCTCAGCCTTCTTCTGTTTCCTGTCTC---CTCCGTGGCTCTGTGCCCACTCTGCCCGGCGGCCGTCCAGC---CCTGCCAGCTGCTGCTCGGCCTCCCCCGCGGCCCGGG----T-GGGTGGGGGGTGGGGGCAGGGCCGGCTCTGCCAATGC----CTCAA----GGACCCCTCCCTCG-------------------------------GCGCTGCTGCCCCTTTC-------------------------------------     
 7 Desmodus_rotundus-NW_020090861.1-181115_181287           74.0%  26.0%    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAGTGCTGGTTTCTTCTGGGAC-CTCATCTCCAGCCCAGCGAACGTGGGCTCCTGCTGGCTGGACGGGCTTCCTGGGTGGGAGAGGCTGTGGGCA--------------TGGGCCTGGGGTGGGGGAATGGACACCCCCCGCTGGGGGACAGGAGGTCTTCTCTGGCTCTGGGGGGC----TG---GGAGGAGAGGAAGTCGCTGACCTGGGTG-------GTC----------------------------------------------------------CCGCATGGGGCCGCCGCCAGCCGGGCGTTGTGCCGAAGGGAGCAGTGGGCTGCTCTAACAGTCCGTCCACCTGC-TCGAG-CAGCCCTAGGG----------------------ACCCG-AGGTCCTAAGGGTGGGGAGCAGGCTGGGTGCCCC----AGGAAGTCTCCGT-CAGCAGGCATGTCCGCAGGAGCCACAACGGGGCCCCCGACTCGAGGACACTG--GGCCACACTGTCCTGG-GGGTCCCTCAGCCAGCTCAGATCAGGGA-CCCGCAGACA-TACCTCCAAGTGACCCCAGG--GTGGTTGTTC--CCCGTTGATCGGAA-GCCGGCCTGGCCCA------CATGCTC-GCCTGCCAGCTGCACTGCTGTTTG-----------CTTTGGAAATTCTTCCTGGAGCTGAGGCTCCTGCGGGGAAGAGCCACCACCCCCT------------------------------CCCAGTCAGTGGGAGGC-TG--GGGCGCG-------GCGCAGAGGAGAGA-CAG-------G----GAGAGCCCACCTTGGGACAGGTG-GTAGGGACCAACAGTG-GGCCCAGCCCCCAGGCAGGCAGAGCAGA-A-----TGAGGCTCCTGCTCGAGG----------------TTAA---AAGTCAA-----------ACTTGGACACTGGTGCCCC-----CTCCGTG-CCAAGGCCCCAGGGCTCTTCAGGCAGCTGGCTGTC-C--------TGGCT--GGAGGAA--------CAG------------------GGGCTGGGGACAGCTTCAGGCTCAGCCATCCTGCTTCCTGTCTC---CTCCGTGGCTCTGGGCCCGCTCTGCCCGGCAGCCATCCAGC---CCGCCAGCTGCCACCCGGCCT-C-----CCCTGATGCCCGGT-GGGTGTGCTATGGGGGCACGGCTGGCTCCACCAAAGC----CTCCA----GGACCCCTCCCTGG-------------------------------GAGCTGTGGCCCCCCTC-------------------------------------     
 8 Bos_indicus-NC_040091.1-164911_165141                    72.8%  25.3%    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCACTTTCTGCTCCGCTATGTGGGCTCCCACCGGCTGGACAGCCTTCCTGTGTGGTGCAGGCCAGTGGGCG-------------TGGGCCTCCAGGTGGGACA--GCCGGCTCCTTCCCCAGGAC-AGGCTGCTTCCCCACTCCTGGGAAGT-----G---TGGGGAGAGGAAGTGGGCCAGGGTTTCCACCCCCGC-------------------------CGG--GCAGCCTGCGTGGAGGGGCCCAAGGTAGGGCCTTGTG-----------CACCGGCCGGTCAGCCAAGGGGAGA---GG---TGAGCTGCTCTGAGTCCACCTGC-TCCCA-TTGCACCAGGGCCCCTGGACCCCCCTCTAGC--TCTGT-GTCCCAAAGGCAGGGAACACAGGCGTGGTGGCCC----AGGAAG---------------------TCTCCGAGCCATGAGGAAGTCACCCCCCAC--CAAGTCC---CG-----------GGGGGTTTCCTCAGCCTGCTCAGATCCAGGGACCCACAGAC--AGCTTCGAGGTGACTCAGGGTGGTCTCTATTT--CACATTGAACAGGA-CCCAGCCTGGCCCAGGC---CTG--GTCTG-CCTCAGCC-AAGCTCTGTTTC-----------CTTCAGAAACTCCTCCTGGAGGTCAGAGCCATGTGGTGGACCTGCCAGTGGGCCAGGTTCAGTGTCCTCCTCGGTCAG----------CGA-------------------------------GTGGCATGAGTGT-----------GGGGTCCACTGGGCCCCCAGGGTAGGAG-GCAGGAGTGGGCTGTT-GGGCCAGCCCCC--------------------------------GGTGGGGAGGGTGGGCAGCTTCAGGAAGT---CAGACTCTGGGGGCCCA-CCCGATCCTGGGACATCTT-----CTCAGTG-CCCAGGCCCCAGGGCTCTCGAGGAAGCCGCC--TG-G--------AGGTGGCCGGTGCCCTGGCTGGGAAGCTTGGCTGGGCT-----GGGGGATGGGCCC--------GGGCATCCTCTGT-TCTCTGCTC---CTTCGTGGCTCTGTGCCCACTCTGCCTGGTGGCCATCCAGC---CCCACCAGCTGCTGCGCGGC--CTCCCCACG-GGGCCTGGGT-GGGTATGGGGTTGGGGCAGGACTGG-CTCATCAGTAC----ACAAG-----GACCCCTCCCTTG-------------------------------GAGCTGCCCCCCCCTCCCAGCC--------------------------------     
 9 Ceratotherium_simum-NW_004454172.1-170587_170766         71.7%  27.5%    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCTCTGGCTCCTGGGAAGC----TG---TGGGGAAAGGAAGTCTCCCACCTGGGCAGCGGGGCAGCG-----------------------------TGCATGCCCTGGAAGACCCAGGGTGGAGCTTTGTG-----------TGCTGGATGGTCGGCCAAGGGAGAA---G--TAAGCTGCTCTG-AGAGTCATCTGC-TCAAG-CAGCACTGGGGGCCCGTGGACCCCCTCAAGC--TCTGT-GTCCCGAGAGTGGGGGACCCAGGTGGGGTGCCTG----AGGACAGCTCCAT-CAGCAGGCAGGTCTTTAGGAGCCACCGACTC----------AGAAACAGTGG---GCCACACTGCCGTGG-GGTCCACTCAGCCTGCTCAGATCCGGAG-ACCACAGGCA-TGCTGCCAAGTGACCCAGGGTGGTCTTGATTT--CACGTTGATCGGGA-GCCAGCCTGGCCGAGGCAGGCTCTGGCCCCCCTTCAGCTGACCTGCTGTTTC-----------CTTCGGAAACTCTCCCTGGGGTTCAGGCCCCTGTGCTGGAGCTGACTACAGGCTGGGGTTCGGGTGGCTCCTCTGGAGCCCCCTCCCGGGTCAGCGGTGGGCGCCTGGGGGACGGCATGGAGGGTAGTCAGGGTGAGACCTGGGAAGGGCCCACCTGGCCCCACAGGGCAGGAG-GCAGGGACGGGCAGCT-GGCCCAGCCTCCAGGCAGGAGCGGGGTG-GAGTTTCCCACATCATGCACGAGATGTGGGAAACTTTAGGAAGT---CAATCCTGGAGGGCCTGGCCCCACTCGGGAACATCCT-----CTCAGTGCCTGTGGCCCTAGGGCTCTCGAGGAAGCTGCCTCCT-G--------GCTCTGAGGTGGCCCTGGCGGGAAGGAGGGCTGGG--C-----CCAGGATGGATCCGCCGGCTCAGCCTTCTTCTGTTTCCTGTCTC---CTCCATGGCTCTGTGCCCACTCTGCCCGGCGGCCGTCCAGC---CCTGCCAGCTGCTGCCCAGCCTCTCCCGTGGCCTGGG----T-GGGTATGGGTGG-GGGCAGGGCCGGCTCTGCCAGTGC----GCAA-----AGACCCCTCCCTCG-------------------------------GGGCGGCTGCCCCTTC--------------------------------------     
10 Lemur_catta-NC_059130.1-163634_163747                    85.7%  36.7%    ----------------------------------------------------------------------------------------------------------------------------------------CTCCACGTGCAGCGGAGGACGGAGCAGATGGGC--CGGTGTCCTGGG-TCCGGCCTCCATCTGCAC---AGCTAATGAGCTGATGACGATGGTTTCCCGGCTCTTGGCACCTTCTGGAGAGCCGT---------G---------------------------------------GGCCGGCCCTGCCCGGGCAGTGCCCCTCCTGGGGCAGGCGTGGG--------------------------GGGGTGCAGGGACC-TCCTGGGGGCCAAGCC-------------CAGGGGCCCCACAGTCACAGGG----TGGCTGGGGGAG---GGGA-------CGGCAG---------AGAGTAACCGCATGAGCCTGTTC--CCTCCTGGGATCTTGCTTCCAGCACCGCGTACGTGGGCTCCTGCCAGCGGGACAGACTT-CCTGT-GTGGGAAAGGGTCGGGCACGGGCCACGTGGGGTTGCTGGGCACCACCCGGG-ATGGAGTCGCTTCT-CTGGCTCCTGAAAGCCACCACTGGGCAGGCCCGGGCA--CGGG---CCCCGCGTC-CACC-AGGTGAAGGCCTGGGCGTGGGGCAGGTGGAG-----CCCCTGATGCGGCA--CGT-GGC----------CACACTGCCCTGGGGCTGGGTCCCCTCCG------CCTG----CTCAGACACTCGCGTGG--CCCAG--GCGCACAC--TCTGAGGGCCTCTGCCGTCT---CCATGT---------CACACCGGCCGGGCC-----------CCGGCTGCAC-----------CATTTCCTCCTGGAGCTCC-ATGGCACTGA----CTTTCAGACCCCTGATTTC-----GGGCAGCCCCGTGCCCTCCTGGGTCAGCGGGGGCGGGGCAGACGCAG-GGACTGCCGCG---------------------------CCGGCCCCCAAAGGG---------CAGAGGCACTGATGGGACCTGCCAGAGCAGGGGACTGGGGCGGGGCCACGT-----------C-AC--AGGTGCTGGAAGCTCGAGGAAGCTGCTCCTG-GCCTCACGGTGGCCGG-GCT-GCCCGGCCTGGAGGAGTGGCCCAGCA--TCCGGCAC------------------------------------------------------GGGGCTACCTGGCCTGGCGGCT------------GCCCAGCTACCACCCTCCTTCCCCGCCCCGC-AGGGCTCT-------GGGGTAGGGGCAGGGCTGGCTCCTCCCTC------GCGGCCTCCAGGGCCCCCCGCA-GAGCTGCAGCCCCTGGCCGGCA---------------------------------------------------------------     
11 Sus_scrofa-NC_010448.4-164146_164322                     73.1%  25.4%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCTTCCAGCCATGCACACGCGGGCTCCCCTTCCCGTGTGGGAAAGGCCAGGGGGCA-------------TGGGCGTCCAGATGGGACG--TTGGACCTCTCCCAGGACAG-GCTGGTCCCCCTGGCTCCTGGGAAGC----TG---TGGGGAGAGGAAGTCACCCACCTCTGCAGCCCTCAACTGCACCCCGTGTGCGT-----GGAGGG--GTCGGCTGTCTGGAGTCCACCTGCTCCA---------------------------G-CAGCGCCAAGGCCCTG---TG---C--CCCCTCCAGCTCT---------------------------GTCCTGGTACGTGGGAAC--AG-----------------GGAACGCAGGTGTGGTGCCCA----AGGAAGCCTCCAT-CAGTAGGCAGGCTCCTCGGAGCCATTGTGAAGCCTCCACTCAGGGATGGCCG---CC-----------ACCCTGTCCTGGGGTGTCCCCGGATCCAGGGACCCACAGGCA-GGCCTTTTGGTGACTCATGT-GGCCCCGATTT--CACCTTGAGCAGGA-GCCGGCCCTGCCTGCTC---CCC--GCCCCCCATCAGCTGAGGTGCT--GTT-----------CTTTGAAAACTCTCCCTGGCGGTCAGGCCCTTGCTGTGGAGGTGACTGTGGCCCCTCCTGAGCTTCCTCCCA----------------GGTCAGCAGTG-----------TGCGTT-TGGGGGTTTTACCCAGGC-----------AGGGCCTACAGGCTCCACAGGGCGGGGG-GCAGGGGTGGGCAGCT-GGCCCAGTGCCCAGGTGAGGTGGGG---------------GTCCTGCAGGATGTGTGGGAAACTTGAGGAAGT---CAGACTTGGAGGCCCCG-CCCCCTTTCTGGACCCCCT-----TTCTGTG-CTGAGGCCCTGGGCTCTCGAAGAAGCTGCTC--TC-G--------GGGTGGCTGCTGTCCTGGCTGGATGGCCCGGCCGGGCT-----GGGGGATGGATCCGCAGGCTCAGCCTTCTGTTTC-TT--GTCTC---CTCCGTGGCTCTGTGCCCGCTCTGCCCGGCGGCTGTCCAGC---CCCGCCAGCTGCCGCCCAGC--CTCCCTGTGCCGGCCTGGGT-GGGTGTGGGGTGGGGGCAGGGCCAA-CTGGCCAGGAC----CGCAA----GGACCCCACCCTGG-------------------------------AAGCTGCCCCCTCAC---------------------------------------     
12 Callorhinus_ursinus-NW_020313076.1-175520_175684         74.8%  23.7%    --------------------------------------------------------------------------GCGTGACGGGGAGGCAGAGGGCCCTCTCGGTGCAGAGGCCAGCTCCACACTCCTTGAGGGCTGTCGG------GGGTAGAGGCATCAGGGAAGGATGAGTAATCAGCAGTGTCTTTTTCTTCCTGGGA-CTTTGCTT----CCAGCAGACGTGGGCTTCTGCCGGCTGGATGGGCTTCCTGTGTGGGAAAGGCCGGTGGGCG-------------CGGGGCCCCCCGGGCAGGGAGACAGACACCCTTTCCAGGACAGGACGTGTTTTCTCTGGCTCTTGGAGAGGAGCTTTGAGGGGGAGGAAGCTGCCCACTTGGGCAGTCCCCCAGTGGGCCTCCATACCAG-----CCAGGG-GCAGCCAGCCCTGGAGGACTCCAGGATGG-GGCTCGTG-----------TGCCGGATGGTCAGTTACTGAGAGCAGGA----AGCTGCTCTCAGAGGCCATGTGCGTCCCG-GTGGTCTCG--------GTTCCACATGGATGG-GAAGT-CACCC----------------------TGGCCCAGGCAGACCCTGGACCCTTTGGAAACTCCCCTGTCGTTCAAGCCGTGGGTGGAGCTGACTGTGGGCCAGGCGCAGGCGGCCACTCCTGG-GC---TCCCTCCCAGGTCAGCGGTGGGCATGTGGGGGGACAACACCGAGGGGAGTCAGGGTGAC-----------GCTCAGGGAGGGC-GCCACCTGGCCCCGCAGGGGCACTGGCCCAGCCCATGCAGGGGAGCAGTTT--------------AGGGGTCCTGCCAAGATAGAGGAGACCGTAGGAAGTCAAGTTGGGAGAGCCCA----------GCTGCTTCCGGAC----------AGTCCTCAAGGCGC--------------------CCGAGG-----------------------CCCCTGGGCTCTCGAGGAAGCCG-CCCTGGCCAGGAGGAG-CGGCGGGGCCC--------------------------GGGGATGAGTCCATGGGCTCAGCCTTCTG---TTTCCTGTCGGCTCCGTGGCTCTGTGCCCGCTCTGCGGTGGCC------GTCCAGC-CAGCTGCCGCCTGCCTCCCGCGCAGGCCCAGGTGG-G--------TGTGGGGTGGGGACAGGGCCGGTTGGCCAGTGCAGGGG----GGACCCCTCCCTCAACCTGCAGGAGCTTCCTCTCTTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
13 Lagenorhynchus_obliquidens-NW_020837953.1-163460_163632  74.0%  30.2%    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGGGCA--GCGGATGCCCGCCCCAGGAC-AGGACGTTTCCGTGGCTCCTGCGAGC----TG---TGGGGAGAGGAAGTCCCCCACCTGGGCAGCCCTCGACCAGGGTTTCCACACCC-----GCCGGG--GCTGCGTGTGCGGAAGGTCCCAGGCTGGGGCCTCGTG-----------TGCCAGCCGGTCAGCTGAGGGGACC---GA---G---CTGCTAGGAGTCTGCCTGC-TCGAG-CAGCGCCAG---AGCCCGTGGACCCCCAAGC--TCAGT-GTCCCGAGGGTGGGGAATGCAGGCGTGGCGGCCC----AGGAAGGCTCCGT-CCGCAGGCGGGTCCTCGGGAGCCATGATGAAGCCACTGCTCAGGGACAGAGG---GCCACCCTGTCCTGGGGGTCCCCTCAGCCTGCCCAGGTCTGGGGACCCACAGACA-AGCCTCCGGGTGACTCAGGGCGGTCCCGATTT--CACACTGAACGGGA-CCTGGCCTGGCCCGTGC---CTCGGGCCCTGCCTCAGCGGAGCTGCTGCTTC-----------CTTTGGAAGCTCTCCCTGGCGGTCAGGCCCCCGCGGTGGAGCTGACTGTGGGCCGGGTGCAGGCGGCTCTTCCTGGGCAT-CCTTCCCGGTCAGCAGTGTGCGTCTGGGGGCTTCA-TGGAGGGGGGTCAGTGTGTGGCC--CAGGCAGGTCCACCGGGCCCC-CGGGGCGGGA-GCAGGGGCCGGCAGCT-GGCCCAGCCCCCAAGTGGGGTGGGAGG----------GGCGTCCTGCACGAGATGTGGGACAC------TAGT---CAGACTTGGAGGACCTG-CCCGGTTCTGGAACGTCCC-----CTCTGTG-CTGAGGCCCCAGGGCTCTCTCCGCAGCTGCCTTGG-A--------GGTGGCTGGCCACCCTGGCTGGGAGGCGTGGCCGGGCT-----GGGGGAAGGGC--------TCAGCCTTCTTCTGT-TTCTTGTCT---CCCCCTGTGGCT---------CTGCCTGGCGGCGGTCCAGC---CCCACCGGCTGCTGCCCCCGGACTCCCCGCACGGGCCTGGGC-AGGTGAGGGCTG-GGGCGGGGCCGG-CTGGCCAGTAC----CGCGA----GGACGC---------------------------------------------------------------------------------------------     
14 Sturnira_hondurensis-NW_023520724.1-167244_167424        74.3%  25.6%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCCGGTTTCCTCTCGGGAC-CTAGTCTCAAGCCCGGGGAACCTGGGCTCCTGCTGTCTGGACCGGCTTCCTGGGTGGGAGAGACTGTGGGCC--------------TGGGGTGGGCGAAC-------GGACACCCCCACGGGGGCACAGGGGGTCTCCTCTGGCTCTGGGGGGC----TA---AGGGGAGAGGAAGTCGCCAGCCTGGGCA-------GCC----------------------------------------------------------CCGCACGGGCCGCTGC-CAGCCAGGTGTTGGG-CCAGAGGGAGTGTGAGCTGCTGTGGCGGTCCATCCACCTGC-TCCAG-CAGCCCTGGGGACCCGAGGTCCCGAGGGTGGGGACCCG-AGGTCCCGAAGGTGGGGACCAGGCCAGGTGCCCT----GGGAAGGCTCCGT-CAGCAGGCATGTCTTCAGGAGTCACAACCAGGCCCCCGACTCAGGGACACTG--GGCCACACTGTCCGGG-GGGCCCTTCAACCAGCTCAGATGAGAGA-CCTGCAGACA-CACCTCTGAGGGGTC--CGG--GTGCTGGCTC--CATGCTGACCGGGA-GCTGGCCCGGCGCG------AATGCTC-GCCCACCGGCTGGGCTACTGTTTG-----------TTTTGAACCTTCTTCCTGGGGCTGAGGCTCCTGCAGGGGTCGGGGAGGGAA--------------------------------------GCCAGTGGGGGGC-CG--GGGCATG-------GCACAGAGGAGGGA-CCG-------G----GAGAGCCCACCTTGGGACAG-GG-GTAGGGACCAGCAGCT-GGCCCAGCCCCTGGGCAGGGGGAGCAGA-G-----TGGGGCTCCTGCCCTGGG----------------TCAG---GGAGCCA-----------AGGTTGGAGGCTGGTGCCC-----CTCCGCA-CCGAGGCCCCGGGGCTCTCCAGGCAGCTGGCTGCC-C--------TAGCG--GGAGGAG--------CAG------------------CAGCTGGGGACAGCCTTGGGCTCAGCCGTCCTGTTTCCTGTCTC---CTCGGTGGCTCTGGGCCCACTCTGCCCGGCAGCCTTCCAGC---CTGCCAGCTGCCACCCGGCGT-C-----CCCTGGAGCCCAGT-CGGTGTGTAGTGGGGGCATGGCTGCCTCCACCAAAGC----CTCCA----GGACCCCTCCCTGG-------------------------------GAGCTCAGATCCCCCCTC------------------------------------     
15 Artibeus_jamaicensis-NW_023552099.1-166588_166756        73.3%  22.6%    -------------------------------------------------------GGGGAGTGGGGGGTGGGCGGGGAC------------------GTCCGGGGCTGGTGGCCCCATGTGCACTTGGGCTGCGGGGAGGGGCCTCCCTGAGGGGCTGAGTAATCGGAAGTTTTTAATCGGAAGCCGGTTTCCTCTCGGGAC-CTGGTCTCCAGCCCGGGGAACCTGGACTCCTGCTGTCTGGACCGGCTTCCTGGGTGGGAGAGGTGTGGGCCT--------------GGGGCG--------GGGGAACGGACACCCCCACAGGGGCACAGGAGGTCTTCTCTGGCTCTGGGGGCTAAG--------GGGAGAGGAAGTCGCCAGCCTGGGCAGCCCCCCCCC----------------------------------------------------------CCCCGCGGGGCCGCCGCCAGCCAGGTGTTGGGCCGAAGGGAGCGGTGAGCTGCTGTGGCCGTCCACCCACCTGC-TCCCG-CAGCCCTAGGG----------------------ACCCG-AGGTCCTGAGGGTGGGGACCAGGCCGGGTGCCCC----GGGAAGGCTCCGA-CAGCAGGCGTGTCCTCAGGAGTCATAGCCGGGCCCTCGACTCAGGGACACTG--GGCCACACTGTCCTGG-GGGCCCGTCAGCCAGCTCAGATAAGAGA-CCCGCAGACA-CACCTCTGAGGGGTCCGGGA--GC---------------------------TGGCCCAGCCTG------CCTGCTC-CCCCACCAGCTGCGCTGCTGTTTC-----------TTTTGGACATTCTCCCTGGGGGTGAGGCCCCCTCCCA----------------------------------------------------GTCAGTGGGGGGC-CG--GGGCGCG-------GCGCAGAGGAGAGA-CAG-------G----GAGAGCCCACCTCGGGGCAGGGG-GCAGGTGGA-------------------------------GCAGA-------GCGGGGCCCTGCCCTGGG----------------TCAG---GGAGCCC-----------GAGTTGGAGGCTGGCGCCC-----CTCCGTG-CCGAGGCCGG-GGGCTCTCCA---------------------------------------AG-----CAG------------------CCGGCCGCCCTAGCCGGAGGAGCAGCCATCCTGCTTCCTGCCTC---CTCTGTGGCTCTGGGCCCACTCTGCCCGGCAGCCTTCCAGC---CTGCCAGCTGCCACCCGGCGT-C-----CCCTGGCGCCCAGT-CGGTGTGGAGTGGGGGCACGGCTGCCTCCACCAAAGC----CTCCA----GGACCCCTCCCTGG-------------------------------GAGCCGTGGCCCCCCTC-------------------------------------     
16 Pteropus_giganteus-NW_024346980.1-160184_160261          71.6%  22.9%    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTGTGGACCCCCGGCGGG-----GCAGGGGGCACCCCCAGGACGGGACGTTCTCTCCGGCCCTGGGAAGCTGG---------CGGGGAGAAGCGGCCTGCCTGGGCAGCCCCGCACAGGGTCTCCACCCGTT-----CGGG----GCACTGCGTGTGGGGGACCCCAGGGTGGGGCCTCGCGTCGTGCTGG--------GTGGCTGGCCGAAGGGAAT----AGTACGCTGCTCTGACTGTCCCCTTGC-CCGAG-GCACCCTCGG-----------------------GCTCT-GTGTCCGGGGGCAGGGCACCCAGGCGGGCGCCTA----AGGGAGGCCCCTT-CAGCAGGCACATCCTTAGGAGCCGTGATGGGGCCCCTGACTTGGGGACAGTG--GGCCACACTGTCCTGACTTGG-AGACACACTCCCCTGACTTGGGGACAGTGGG------------------------------------------------------CCACACTCGCGCCTCTGTGCCGGCCCCTGCGGTGGAGGTGACCAGTGTCGGCAGCGGGCAAGCGTCTGGACACCACCATGGGAGTCGGGAGACCCCGGCCTAGCTCAGGGCAGGCGGCAGGGC--TGGCGGCTGGCC------CAGCCCCAGGCAGGGGAGCAGGTG--GGGGTCCCA-----CAGGAGGCCCTGGA--AC-------CTTGGGAAGTCAAACTTGGAGGCCGCGTTCCTGGAACAGCCTCGCGGTGCCAGCCCCGGGGGAGGCCGGTCTGGCGGGCGAGCCGTGGCCGGGACGGCACGGGCTCAGCCTTCTGCTTCCTGCCTGCTCCGTGGC-----CCGGTGCCCGCCCGGTCCA-----CTCTGCC-CGGCGGCCGTCCGGCCCCACCAGCTGCTGCG----------------CAGCCTCCCCCGCTGGCTGCCGGGCTCCGGCGGGGTGGGGCGGGGCAGGGCCGGTCGCCAAAGCGAGAGGACCCCTCCCTGGGCGCTGCGGGCCCCACACGGCAGGCATTTCCTCTGCTCCCCACAGGCGGGCTGGGCTCCATCTGCTGACTT-T-TCAGGAAAGTGCCCGACC-TGGCC----------ACTGCTGTG--AGCCTCTCTCA----CTCTC----GGCTCCCTGGGGGC-------------------------------TCCCTGGACCCGCCCTGCACGGC-------------------------------     
17 Orcinus_orca-NW_004438465.1-162507_162595                71.8%  27.5%    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGGATGTCCCGTGTGGGAAAGGCCGGTGGGCG-------------TGGGCCTCCAGGGGGGGGG--GGGGATGCCCGCCCCAGGAC-AGGACGTTTCCGTGGCTCCTGCGAGC----TG---TGGGGGGGGGGGGGGCCCCACCCGGGCAGCCCTCGACCAGGGTTTCCACACCC-----GCCGGG--GCAGCGGGGGGGGGGGGTCCCAGGCTGGGGCCTCATG-----------TGCCAGCCGGTCAGCTGAGGGGACC---GA---G---GGGGGGGGGGGCTGCCTGC-TCGAG-CAGCGCCAG---ACCC-ATGGACCCCCAAAC--TCAGT-GTCCGGGGGGGGGGGGATGCAGGCGTGGCGGCCC----GGGAAGGCTCCGT-CCGCAGGCGGGTCCTCGGGAGCCGTGATGAAGCCACTGCTCAGGGACAGAGG---GCCACCCTGTCCTGGGGGTCCCCTCAGCCTGCCCAGGTCTGGGGACCCACAGGCA-AGCCTCCAGGCAACTCAGGGCGGTCCCGATGG--GGGGGGGGGCGGGA-CCTGACCTG-------G---CCCGGGCCCTGCCTCAGCGGAGCGGCTGCTTC-----------CTGGGGGGGGGGGCCCTGACGGTCAGGCCCCCGCGGTGGAGCTGACCGTGGGCCGGGTGCAGGGGGGGGGGGGTGGGCAT-CCTTCCCGGTCAGCAGTGTGCGTCTGGGGGCTTCA-TGGAGGGGGGGGGGGGGGAGGCC--CAGGCAGGTCCACCGGGCCCC-CGGGGCAGGA-GCAGGGGCCGGCAGGG-GGGGGGGGCCCCAAGTGGGGTGGGAGG----------GGCGTCCTGCACGAGACGTGGGACAC------TAGT---GGGGGGGGGGGGACCTG-CCCGGTTCTGGAACGTCCC-----CTCTGTG-CTGAGGCCCCAGGGCTCGGGGGGGGGGGGCCTTGG-A--------GGTGGCTGGCCACCCTGGCTGGGAGGCGTGGCCGGGCT-----GGGGGGGGGGG--------GGGGCCTTCTTCTGT-TTCTTGTCT---CCCCCTGTGGCT---------CTGCCTGGCGGCCGTCGGGG---GGGGGGGGCTGCTGCCCCCGGACTCCCCGCACGGGCCTGGGC-GGGTGAGGGC-------------------------------------------------------------------------------------------------------------------------------------------     
18 Pteropus_vampyrus-NW_011889090.1-163498_163575           72.4%  23.6%    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTGTGGACCCCCGGCGGG-----GCAGGGGGCACCCCCAGGACAGGACGTTCTCTCTGGCCCTGGGAAGCTGG---------CGGGGAGAAGCGGCCTGCCTGGGCAGCCCCGCATAGGGTCTCCACCCATT-----CGGG----GCACTGTGTGTGGCGGACCCCAGGGTGGGGCCTCACGTCGTGCTGG--------GTGGCTGGCCAAAGGGAAT----AGTACGCTGCTCTGACCGTCCCCTTGC-CCGAG-GCACCCTCGG-----------------------GCTCA-GTGTCCGGGGGCAGGGCACCCAGGCGGGCGCCTA----AGGGAGGCCCCTT-CAGCAGGCACATCGTTAGGAGCCGTGATGGGGCCCCTGACTTGGGGACAGTG--GGCCACACTGTCCTGACTTGG-AGACACACTCTCCTGACTTGGGGACAGTGGGCCA-CACTGTCC--TGACTTGGGGACACACTCCCCTGACTTGGGGACAGTGG-GCTACACTCTCGCCTCCGTGCCGGCCCCTGCGGTGGAGGTGACCAGTGTCGCAGCAGGCAAGTGTCCGGACACCACGCATGGGAGTCGGGAGACCCCGGCCTAGCTCAGGGCAGGCGGCAGGGC--TGGCGGCTGGCC------CAGCCCCAGGCAGGGGAGCAGGTG--GGGGTCCCA-----CAGGAGGCCCTGGA--AC-------CTTGGGAAGTCAAACTTGGAGGCCGCGTTCCTGGAACAGCCTCGCGGTGCCAGCCCCGGGGGAGGCCGGTCTGGCGGGCGAGCCGTGGCCGGGACGGCTCGGGCTCAGCCTTCTGCTTCCTGCCTGCTCCGTGGC-----CCGGTGCCCGCCCGGTCCG-----CTCTGCC-CGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------NNNNNNNNNNNNNNNNNNNNNCGGTCACTG-GACGT------------CCCTAACCTCCAGAAA-GTCCTGTCCATTCCTGGCCACTGCTGCAGGAGCCTGGGCCAGCTGTGGACGGCTATGCCCATCA-----CAAATGCTTCT------------GTCCCATCGCCCCTGCT-GGGTCAC------GGACAGAAATG--TCCCTCTGGCC----CTCCC----CGGTCCCCGCCT---------------------------------------------------------------------------------------     
19 Canis_lupus-NW_023365093.1-175138_175223                 69.6%  20.9%    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGGACTTCCTGTGTGGGAAAGGCCGGTGGGCG-------------CGGGCCCCTCG---GGTGGGGACACACACCCTTCCCAGGACAAGATGTTTCATTTGGCTCTTGGGCAGCACCCA--------------------------------------GATGGGCCT--CCGTATG-----GAGGGG-ACATCGTGCCCTGGAAGACCCTAGGATGGGGCCTGGGG-----------GGCTGGATGGTCACACGGAGAGAAGGTAG----AGTGGT------------------TCCTG-GAGGTCTTG--------GCTTCACATTGACAA-GAAGT-GGTCC-CGGCCCAGGCAGGCCCCAACTCTGGTCAGCTGAGCTTCTGGGCTT-TGGGAGCTCCCTGTCAGTCAGGGGTTGTGGTGTGGCTGACCCCGGGCCAGGTGTGGGTGGCCCCTCCTGA-GC---TCCCTCCCAGGTCAGCCAGGGGCATGCGAGGGGGGGAA----------GTCAGGGTGAC-----------ACTCAGGGAGGCG-CTCC-------------------TGGCCCAGCCCACACAG----------------------------GGGAGTGGGAGGGGTGCTGCACAAGGCAGAGGGGACCTTAGGAGAGCCCA----------GCTGTTTCTGGAC----------AGTCCTCAAGGCTC--------------------CTGAAG-----------------------CCCCAGGGCTCTCGAGGAAGCCG-CCCTGGCCAGAGAGAG-CGGCCGGGCCC--------------------------GGGGATGAGTCCTTGGGCTCAGCCTTCTTCTGTTTCCTGTTGGCTTCATGGCTCTGTGCCCGCTGTGCCGGCGGCCGTCCAGCATCAC-CAGCTGCCGCCGGCCTCCTGCGCAGGCCCAGGTGG-G--------TGTGGGGTGGGGACAGGGCTGGTTCGCCCGATGCAGGG----GGACCCCTCCCTCCACACGCAGGAGCTTCCTCTCCTCCCAGCAGGCAGGCCCGGCTCCATCTGGTGACTTTTCAGGAACATGCCCCCACCCCCAGAGCCACTGTGAGTCTGTCTCTGCTTCTCTGGCCACTCCT-GGGGGCTCCCTGGGGGTAGGTCCGT-TAGATAAAGGC----CACAAAGCAGGGCACCTGCCTCCAGG---GAGCCCA-------GGCCAAGGTGGGTGGTGATGGCCAACCTGCCCCTTCCCAGCCTCCACCAGGCCAGTGCATGGGA-     
20 Phyllostomus_hastatus-NW_025334013.1-168200_168440       73.8%  23.3%    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAACGGAAGTGAGGGTGTCCTCCCGGGAC-CTGGGCTCCAGCCCGGCGAACATGGGCTCCAGCTGTCTGGACTGGCTTCTGGGTGGGAG-A------GGCCA--------------TGGGCCTGCGGTGGGGGAATGCACACCCCCCACAGGGGCACAGGGGGTCTTCTCTGGCTCTGGGTGGGGGGCCG---AGGGGAGAGGAAGTCGCCAGCCCTGGCA-------GCC----------------------------------------------------------CCACACGGGGCCGCCGCCTGCCAGGTGCTGGG-CTGAGGGAGCGGTGAGCTGCTCTGACAGTCCCTCCACCTGC-TCGCG-CAGCCCTAGGG----------------------ACCCA-AGGTCCCGAGGCTGGGGACCAGGCCGGGTGCCCC----GGGAAGGCTCCGT-CAGCAGGCGTGTCCTCAGGAGCTGCGATGGGGCCCCCGACTCAGGGCCACGG--GGCCACGCTGTCCTGG-GGTC-CCTCAGCCAGCTCAGAGCGGAGA-CCCACAGACG-CACCTCCCAGTGGCCTGGGG--CG-CTGGCCG--CATGTGCACTGGA----------AGCTGG------CCTGCTC-GCCCCCCAGCTGCGCCGCTGTTGG-----------CCTTGGAAGTTC-TCCTGGAGTCGAGGCTCCTGCAGGGGAAACCCACCACCCCAC------------------------------CCCAGTCAGCGCGGGGC-CCCGGGGCGAG-------GCCCAGAGGAGAGA-CAG-------GGAAAGCCCGCCCACCTTGGGACAGGGG-GTGGGACCAGCAGCTG-GCCCAGCCCCCCAGGCAGGCGGAGCAGA-G-----GGCGGCAGCTGCCCTAGG----------------TTAG---GAAGCCG-----------AACTTGGGGGCCGGTGCCC-----CTCCGTG-CCGAGGTCCCGGGGCTGGCCGGGCAGCGGGCTGCG-C--------TGGCC--GGAGGAGCAG-----CAG------------------CGGCTGGGCTCAGCTTCGGGCTCAGCCGCTCTGTCTCCTGTCTC---CTCCGTGGCTCTGGCCCGCTCCGCTCG--GCGGCCTTCCGC---CCGCCAGCTGCCACCCGGCCT-C-----GCCTGGCGCCCGGC-GGGTGTGCGGCGGGGG-CACGCTGCCTCCACCAAAGC----CTCCG----GGACCCCTCCCTGG-------------------------------GCGCCGGGGCCCCCTCGCCCT---------------------------------     
21 Molossus_molossus-NW_023425372.1-165161_165322           71.6%  22.9%    -------------------------------------------------------------------------------------------------------------------------------AGCGTGGCGAACGGGCCTCCCGCTGCC----------CGGGA----------------------------------------------------------------------------------------------AGGCCATGGGCC--------------TGGGCCTCCGGCAGGGCAACGGACACCCCCAGGACAGGGGCGGGAAGTATTCCCTGGCCCTAGGAAGATGG--------GGGACAGGAAGTCGCTGACCTGGGCATGCGGCACCGGCCTCCACCAGCCCA-----GGGCCGCATG------CCCTGGGAGACCCAGGACGGC---------TGCACTGAG----------CTGGACAG-----TTGGCGGGAAAAGGATGCTTGAGTGGCCACCGTC-CCGAG-CAGCCCCAGGGGCCTGAGCACCCTCCAGCT----GTGA-GG--------CGGGGGACCCAGGTGGGGGACCCA----AGGAAGGCTCCGT-CGGCAGACATGTCCGTATGAGCCCCGATG--GGCCCCGACGTGGGGACAGTG--AGCCCCACTGTGCTGT-GGGACCCTCAGGCTGCTCGGATCAGGGA-CCTGCAGACA-CACTTCCATGTGACTCGGGG--CGGCT-GTTC--CGCGCTGACCCCTG-GCGCA-----------------TGCCCG-TCCCGCAGTGGCACCGCTGTTTG-----------CTTTGGGAGCCTC---TGGAGGTCAGGCCCCTGCGGTGGAGAGCTGACCAGTCGAGGGTCAGGCGGCTCCTCGTGAGT-TCCCT-CC-CGTGGGCGGTGGGCGTGTGGGGAGGTGGACAGCGGAGAGTCAGGGGA-GAA-------CTGTGCAGGGCCCACCTTGGGACAGGAG-GCAGGGACGGGCAGCT-GGCCCAGCCCCCGGGC---------AG---------CGGGGTCCTGCCCGAGG----------------AAGT---CAAACGT-----------GGGGGCCTGGCCATGTCCT-----GTCCATG-CCGAGGCCCAGGGCCCTCGCAGGAGCTGCCCCCTA-G--------GGGCC--ACTGGCCTGG-----CGGGAGGCTGC----G-----AGGCCGGACGGTCCGGGGCTCAGCCTTCTCCTGTTTCCTGTCTC---CTCTGTGCCCACTCTGCCTGGTGG-----------------------CTGTCCAGCCCGGCCAGC-T-----GCCAGAGGCCCAGT-GGATGTGTGGTGGGGGCAGGGCTGGCTCCACCGAAGC----CTGGA----GGACCCCCCCTGGG-------------------------------AGCTGCGGGCCCCTTTCCTCCCCCT-----------------------------     
22 Miniopterus_natalensis-NW_015504651.1-665085_665227      71.2%  23.3%    ----------------------------------------------------------------------------------------------------------------------------------GTGG-CCATGGGCTTCTGTGGGCA----------TGGGC----------------------------------------------------------------------------------------------CTTCTCTGAGGC--------------AACGGACACCCCTCCCCCAGAACCGGGACAGGGACAGGGACCGGAGGTTTTCTCTGGCCCTGGGAAGCTGG--------GGGAGAGGAAGTCGCTGACCTGGGCAACCCCCCCACAGGGCCTCCACCAGC-----CGGGGCAGTGTGTCCGCCATGGAGACCCCAGAACGTGGCTGCATGTTGTGCTGGGTGGTCAGATGGTCCGCAG-----AAGGTGAAGGAAGTTGCTTGGACAGTCTACCTGC-TTGAG-CAGCCCCAGGGGCCTGAGGACCCTCGAGCT----ATAT-GCCCCTAGTGTGGGGGACCCAGGAGGGGTGCCCA----AGGAAGGCTCTGT-CCATAGGCATGTCCCCTG--------------------ACTCAGGGACAGTG--AGCCA--TCTATACTG-CAGGTCTCCAGGCTGCTCAGATCAGGGA-CCTGCAGACA-CCTGC--AGGTGACCCAGGG--TGGTT-GTTC--CACGTTGAACAGGG-GCTGGCCTGGCCCA------CTTGCCCAGCCCGTCAGCCGCCCTGCTGTTCG-----------CTTAGGAAACTCTCCCTGGTGTTCAGGCCCCAAG-----------GTGGGGAGGTGGATCAGGTGGCTCCTCCTGAGG-TCCCT-TCTGATCAGTGGTGGGCGTGTGGGGAGAT--GGCCCAGAGAAGCAGGTGA-GAC-------CCGTGGAGGGCCCACCTTGGGGCAGGAG-GTAGGATCGGGCAGCT-GGCCCAGCCCCGGGCAGGGGAGCAAAA---------TGGGGTCCTGCCCGAGG----------------AACA---GGAACTC-----------GGAGGCCTGGCCCTGTCCT-----CTCCATG-CCAAGGCCCCAGGGCTCTCGAGGAAGCTGCCTCCA-G--------CTGCC--CCCTGCCCTG-----GGGGAGGAGCT----G-----AGGCCAGGACA-----------------GCCTGTTTCCCGTCTC---CTCCGAGGCTCTGCCCGCTC-----------------------------TGCCCTCTAGCCTGGC-C-----AGCTACTGCCCGGT-GTGAGTGTGGTGGGGGCAGGGCTGGCTCCACCAGAGC----CTTGA----GGACCCTCCCTGGG-------------------------------AGCTGTGGCCCCTTCCCTCACCCTGCAGG-------------------------     
23 Eptesicus_fuscus-NW_007370721.1-170177_170319            71.5%  23.7%    ---------------------------------------------------------------------------------------------------------------------------CGCGGGCCGCG-GGGAGGGGCGCGAGGAGGGGCTGA--------------GTAACCAGTGTGTCAGTTTCTCCCCGGGT-CTGCGTGCCCAGCTGGCGCACGTGGGCTCCCGCAGGCTGGACCCGCTTCCTGCGTGGGCTCCTGTGGGCGTGGCCTCCGGCAGGGCAACGGCCCCCGCCCCCCCAGGACCAGGACCAGGACAGGGACAGGAGCTTTTCTCTGGTCCTGGGGAGCGGGGGG---GGGGCGGGGTGG----GAGGAGTGGGGCGGGGAGAGGA----------------------------GGTCGCTGACTCGGA-CACCCCCG----------ACGGGGCCCCCACCGGCCGTGTGTTGGGCTG-----GGAGGTTGGCGGAGGGAGAGGGAAGTCCACCTGC-TCCAG-CCGCCCCAGGGGCCCGAGGACCCCCGAGAC-------T-GTGTCTTGAGGGTGGGGACCCAGGGGGGCGCCTCGGTGCCAGCGGCTCCAT-CCGCAGGCAGGTCCTGGGAGCCAC-------------------------------------CCCTCCTGT-GGGT-CCCTCAGGCGCCCAGCTCAGGGA-GCAGCAGGCT-CACCCCAGGGACTCA--GGG--CC---------------------------------TGGCCC------ACGGCCC-GGCCGGCCGCTGCGCTGCTCTTG--------------GCAGAGATTCTCGCCGGCCTTCCGGCCCCGGGATG------------------------------CGCACCTGAGC-TCCCT-C-CGGTCAGCGGTGGGCATGTGGGGCGTGGCACC--CGGGAGGGTCCGGT-GAG-------GCCCGAGGAGCCCACCTCGGGGCAGGAG-GCAGGGAGCCGTCTGG-GGTCCTGAGGAGGGATGGGGACAGCAG-----------GGGGTCAGA---------------------------------CG------------TGGAGGCCTGGCCCGCCCT-----CTCCCCG-C---GAGGCCCCGGCTCCCCAGGAAGCTGCTCTGC------------GGC--CGCTGCCCTG-----GAGGAGGGGCT----G-----AGGCTACGGACGATGGAGGGGTTCGGCCTTCTGCTTCCTGTCTC---CTCGAGGCTCTGCCCGCT---CTGCCAGGCCG----------------------------------G-----CTGCTGCCCGAGGG-CCCGGTGGGGTGGGGGCAGGGCTGGCTCCACCGGAGC----CTGGA----GGACCCTCCCTGGC-------------------------------TCTGAGCCCCTCCCCTCGCCTGGCGGGAGCT-----------------T-----     
24 Camelus_bactrianus-NW_011514262.1-162111_162153          72.9%  27.7%    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCTGTGCGGGAAAGGCCAGTGGGCG-------------TGGGCCTCCAGGTGGGGCA--GCTGACCCCTCCCCAGGATG-GCCTGTTTCCCTGGCTCCTGGGGACC----TG---TGGAGAGAGAAAGTCACCTGCCTGGGCAGCCCTTGACCAGGGCCCCCTCCCCC-----ACCAGG--GCCGTGTGAGTGGAGGACCCCAGAATGGGGCTTTGCG-----------TGCTGGCCAGTCGGCCAAGGGAGGA---GT---C--AGCCCCCAGAGCCCACCTGC-TTGAG-CAGCACCAGGGGCCTGTGGACCCCCTCAAGC--TT-----------------GGTGTCCTGGGGCGGTGCCTA----GGGGAGGCTCCGT-CAGCAGGCAGGTCCTTGGGAGCCGTGAGGAAGCCCCCGCCCTGACCTGGGGT---CC-----------C--------CCCAGGCTGCTCAGATCCAGGGACCCACAGACA-GGCCTCTAGGTGACTTAGGGTGGCCCCACCTT--CACACTGAGCACGA-GCTGGCCCGGCCCAGGC---CCT--AGTCTCCATCAGCTAAGCCACTGCTTC-----------CTTCGGAAACTCTCCCTGGTGGTCAGGCCCCTGTGGTAGAGGTGACCTGGGCTGGTTCAGGCAGCTCCTCTGGAGGGG----------ACTCAGTGGTGGGCGTGGGGGGTCGTCA-CAAAGGGGAGACCCAGGG-----------AGGGCCCACTGGCCCCACAGGGCAGGTG-GCAGGGCTGGGCAGCT-GGCCCAGGGCCCAGGTTGGGTGGGAGTG---------GGGGTCCTGCACGAGGTGTGGGAAACCTCAGGAGGC---CCAACT-----------------TTCCATAACATCCT-----TTCTGCG-CTGAGGCTCCAGGGCTCCG-GGGAGCTGCCT--CG-A--------GGTGGCCGGCTGCCCTGGCTGGGAGGAGGGGCCGGGCC-----------------AGGGGACTCGGCCTTCTTCTGT-TTCTCATCT---CCTTGTGGCTCTGTGCCTGCTCTGCCCAGCAGCCGTCCAGC---CCCACCAGCTGCTGCCGGGC--CTCCC-ACGCTGGCCTGGGT-GGGTGTGGGGTGGAGCCAGGGCCTA-CGTGCCAGTAC----CTCGA----GGACCCCTCCGTCG-------------------------------GAGCTGCCCTGCC-----------------------------------------     
25 Puma_yagouaroundi-NW_024412388.1-173998_174067           70.2%  21.5%    ATGGCTTAGCTTCCAAGCTCCTGGCACCTTTCTCCTGGAAAGCCGGGGGACGGGCAGGGCGTGAGCGAGGGGCGCAGAGGCCAGGACAGGGTGCGAGCGAGGGGCGCAGAGGCCAGCTCCGTGCTCCTTGCAGGCTGTCGG------GGGCAGAGGCATCGAGGAGGGAGGAGTAATCAGAAGTGCCTGTTTCTTCTGGGAC-TTTGCTCCCAGCACGGCTTACGTGGGCTTCTGCCGGCTGGACAGACTTCCTGTGTGGAAAAGGCC----------------------------CCTCGGGCAGGGTGACGGACACCCTTTCCAGGACGGGATGTTTTGTCCGGCTCTTGAGAGCTGGAGG-------GAGAAGACACTGCCC----------ATCCCGAACGGGTCGGTGTGCCAG-----CCAGGG-ACAGCTGGCCCTTGAAGACTCCAGGCTGGGGCCTCGGG-----------TGCCGGACGATCGGGTGAAGAGAGGAGGA----AGCTGTTCTCAGTCCCAGTG--ACTCGTG-TTGGTCCTG--------GGTTCACGGTGATCG-GGCCC-TGGCC----------------------CCGGTCAGCTGAGCTGCTGACCTTTGGAAACTGCCTGTTGTTCAGGCCCCTGTGGTGGCACTGACCGTGGGCCGGGTGTGGGTGGCCCCTCCTGC-AC---CCCCTCCCAGGTCCACGGTGGGCATGTGGGGGGACAGAATCGAGGGAAGTCAGGGTGAC-----------GCTCAGGGAGGTC-CCATCCCCAGC-------------------------------------------------------CACACGGGGACAAGATAGAGGGGACTTTAGGAAGTCAAGTTGGGAGAGCCCG----------GCTGCTTCTGGAG----------AGTCCTCAAGGTGC--------------------CTGAGG-----------------------CCCCAGGGCTCTCGAGGAAGCTG-CCCTGGCCGGCAGGAG-CGGCGGGGCCC--------------------------AGGGATCAGTCCACGGGCTCAGCCTTCTTCTGTTTCCTATCGCCTCCGTGGCTCCGTGCCCACTCTGCCGGCGGCCGTCCAGCCCCGC-CAGCTGCCGCCTGCCTCCTGCGCGGGCCCAGGTGG-G--------TGTGGGGTGGGGACGGCCGGTTC-CGCCAGTGAAGGGA----GGACCCCCAACCCCCCCAACCTGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
   clustal                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            .                                                                                                                                                   .             *