Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%

                                                          cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5    ] 1505
 1 Target                                              100.0% 100.0%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAGTGGGGG------------------------------------C-------AGGGGCGGCTG-AGC-----------------AGGTGGCTGGAGGGC-CCAGGTCCCCACAGC--------CC-TGGATGCTGCCGGGCTGTC----G-----GCTCTCGGTCCTCACCGCC---TCCTCTTATGA-GGCCCCCAGCCTCATGCCCTCCC--------------------------CAG------GGGGCAACAAATGCCTGCCATGAAGTGGCTCCCCCTCTTCCCGTCCAGTCAGGCTGAATTCAAGGCCCAGGCCCCCGTGTCGGAGGCCTTCCTCAGCACTGTCTGGGGT---------CTCT--TTGAGGTCTCAA--------ACCTACAGGCCCAGA-AG---GAACTCCCACCCCTCC-C-----GGACCCTGGGCTCCCC-CCGTGCCGCCCAC-TCCCTCCTATTGCCGTCTCC-CCTCACTTCCATCCCCCAAT--------GGTTCCTCCGTGCCCCTCGCCTGGGCACAGCCCCCTCCTGTCTCATCCCGTCCCACG-----------TG----------------------CCAGCCGGGCTCTGCCCTTAG---CAC---ACATCTGA-------TCCACGTGTGCCGCTGC---------CACCCGGCCGACAC-GGAGGCCCCCTTG-GA-CCCTGGCCTCCTCTCCACATAGCGATT-----CTAGG-CCAGACCCAGGC-CCCGA-----G------CCCAGCTCTC-------CCCTGCTCAGAACCT-TCCAGAAGCCCCCACACCTGCCACGCTTGGCA-----GGCCACGTCATCCTC----CAC---TGCACA-------CAGTGCCTAGGGACTTTGCACCT---------G-------CTGGTAG-------CTCCCAGCCAGCCCACATCCTGCCCAGCACTCAGGTTT---CCGCA-GCCCGCGGCCCAGT-------CT--G-GCGTCCGTCTCTGATGGTTCGGGGCCTGCTGCGTGAATTAATGAGGCTGCCCGAGCCCTGGAGCCCGTCTCACGGAGCTGGGTGCCAGGCTGGCCCTGGAC---------------------GGGAGGGGTTCTGACCC-CCTGCACCTGCCACAGGGCGACCCGGCAGAAGAAGACCATGAAGCTGTCCCGGGCCCTCTCTGACCTGGTGAAGTACACCAAGTCCGTGGCCACCCACGACATAGAGATGGAGGGTGAGTGGCTCGGGGACCTGGGGCCACGGGCGGAGGCCTCCCTGTCC------------------     
 2 Saimiri_boliviensis-NW_024100927.1-200757_201661     93.8%  70.6%    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGACCCCATCATGGCCATCCTTGAGCTG------GGCAGGACCCAG----------CCCTT-TCC-----------------TGGCCCCTGGAAGCA-G----TGAGAAGTGC--------TG-GGGGTGCTGCCGGG-CCGT----C-----GGTCTCAGTCCTCAGCTCC---TTCTCCTCCGA-GGCCCCCAGCCTC-----ATGCC--------------------------TTGC-CCGGGGCATCAGATGCCCCTGCCATGAAGGGGC-TCCCTGCTTGCAGTCCAGCCAGGCTGGATT-CAAGGCCCAGGCCCCGTGTCTGAGGCTTCCCTCAGCACTGTCTGGGG-----------TCTCTTCTGGGGCTCAG--------ACCTACAGGCCCAGCAAG---GAGCTCCCACCCCTCC-C-----TGACCGTGGGCCCCCC-CGCCGG---------------------CCACTCC-CTCTCGTCACTTCCCCCAAC--------AGCTCCTCTGCGCCCTTCGCCTGGGCACAGCC-----CTCTCCTGTCCCATCCATGT------------G----------------------CCAGCTGGGCTCTACCCTGAG---CAC---ACATCTGA-------TC----------CTCAC---------ACCTGGGCAACCCG-GGGGCCCCCTTGG-AC-CCCTGGCCTCCTCTCCACATAGTGATT-----CTAGG-CCAGACCCAGGC-CCCGA-----C------CCTAGCTCTC--------CCTGCTCAGAACCT-TCCAGAAGCCCCCACCCCTGTGACGCTTGGCA-----GGCCACGTCCTCCTC----TGCACACACACA-------TGGTGCCCAGGGCCTTGGCATCT---------G-------CTTGTAG-------CTCCGAGCCCGCCCACGTCCTG-CTGGCACTCGGGTCT---CCGTG-GCCTGCGGCCCAGT-------CT--G-GGGTCTGTCTCTGAGAGTTCAGGGGCTGCCGCGTGAATTAACGAACCTGCCCGAGCCCTGGAGCCCATCTCATGGAGCCGGGTGCCAGGCTGGCCCTGAAT---------------------GGGAGGGGTGCTCACCCCCTGCCACCTGCCACAGGATGGCACGGCAGAAGAAGACCATGCAGCTGTCCCGGGCCCTCTCCGACCTGGTGAAGTACACCAAATCCGTGGCCACCCACGACATAGAGGTGGAGGGTGAGAGGCTCGGGGACCGGGGCCCACGGGCGGAGGCCTCCCTGTCCCCTACCCCTGCTGTGCTG     
 3 Callithrix_jacchus-NC_048389.1-200743_201271         93.9%  58.3%    -----------------------------------------------------------------------------------------------------------------------TTCCCGCCT---------------------------------------CTGGCCCTCACCCCAAGCTCAGGTGCCCTGTGGCC------GCCGGAGCCCAGGTCGAGAGGGCACTG-AGG-----------------AGGCCTTGGCAGGCA-G----AG----CTAG--------GC-GGGATGGACATGGG-AGGC----C-----TCGGGGGACCCTGAGGACA---GGCCCTTCCTA-ACCCCCCAGACTTCCCCAAGGCC--------------------------TGTC-CTGGGCCAGGGGCCCCACAGCTCATGCCTCTGC-CTCCTGCACAGAAGAAGGGCAG-CAAGCTG-AAGAAGGCAGCCAGCGTGGACGAGGGC-----CAGGACTCCCCGGGAG---------GCCAGAGCCGAGGGTAGG---------TGCCCTGCCCCATG-GG---GAGG------CCCTGC-A-----CGCTCTTGGGGGCCTC-GCCTAGC--------------------TGGCCCC-TTCTTTGTGGTGACC-------------CCATCATGGCCATCCTTGAGCTGGGCAGGACCCACCCCTTTCCCGGCCCCTGGAAGCA------GTGGGA----------------------AGTGGTGGGGGTGTGGTGTGT---GGG---GCAGGGCG-------GC----------CACAT---------GCCTGGGCAACTCG-GGGGCCCCCTTGG-AC-CCCTGGCCTCCTCTCCACATAGTGATT-----CTAGG-CCAGACCCAGGT-CCCGA-----C------CCTAGCTCTC--------CCTGCTCAGAACCT-TCCAGAAGCCC-TACCCCTGCCATGCTTGGCA-----GGCTACGTCCTTCTC----TGCACACACACA-------TGGTGCTTGGGGCCTTGACACCT---------G-------CTGGTAG-------CTCCGAGCCTGCCCATGTCCTG-CCGGCACTCAGGTCT---CCGTG-GCCTGCGTCCCAGT-------CT--G-GGGTCTGTCTCTGAGGGTTCAGGGGCTGCCGCGTGAATTAATGAACCCGCCCGAGCCCTGGAGCCCATCTCATGGAGCTGGGTGCCAGGCTGGCCCTGAAT---------------------GGGAGGGGTGCTCACCC-CTGCCACACGCCACAGGACGGCACGGCAGAAGAAGACCATGCAGCTGTCCCGGGCCCTCTCCGACCTGGTGAAGTACACCAAGTCCGTGGCTACCCACGACATAGAGGTGGAGGGTGAGAGGCTCGGGGACCGGGGCCCACGGGTGGGGGCCTCCCTGTCC------------------     
 4 Galeopterus_variegatus-NW_007727608.1-253809_254067  82.5%  32.8%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCACAAGCCCCAAGGGCTTGCCGGCTGGGGGTC--------CCCAT--GCCCTTCTCTGAAATGA-C--TGACCCCGAGTGCCTGTCAGGACGGGGGGCAGATGCGGGAGCC----------------CTGGTCCCTGT-TCC----------C-ATCCTGGACTCTCGCGGAGGCTG----TGGGAGG-----------TGGAGTTGTGTCCAGGCAATAGTGGATGTGGGGTGTGCAGACCCACGTAGCAGCTCCAGACAGCCCTGTGGGGCGTGGACCCTGGGGTGGGGCCAAGCTGAACTGTGAGTCTCGGGGGACCACCAGGTTGGGAGACGTTTTGGATCAGGTCTCGCAGGCCCACCC---------------------AGCCTCAG----------TCCTCCAACTCCTATTCCCCA----GGTACCCCCAGCCTCAGCCTTCCCCAGGGGCTGTGTCCATCTCTGGGCCTCAGATGCCCCCCAATCCCCCC-------AAGTGGCTCCCACATTTCTAGTTTACCAGTCCAGGCCACACTTCCCCTGGCCTCTTCCCC------ACGATAGTGATTCTAAATC-----AGA-----TCCAG-----------------ACACTGCC------------------------------------------------CTATCTGTCCCCTGCAGAGTACCGCC--------------CGCCAGCCGTGCTCA-----------------------CAAGTGCCGGCACCT-GCTGGCAGCTCCAGGCCAGCCATGCCCTCCAGCCTCTGTCAGGGTCTGGGAGTCCATCTCCAAGGGGC--------------TCAGACCTGCCCCCCT-AGCTTTGTCCTGAGGCCTGG--------------------TCTCCTCTCTCTGTCCAC------CCAT---GTCTGGCACCTGGCACGTGC-GG--------TGCAGTGGACGCTTGATTGACATTGGGTTGTTGGGTGAATTAGTGAAACTGCCCAAGCCCTGGGGCTCGTCTCACGGAGCTGGGCACCAGGCTGACCCTGAGTGGGAGGGGCGCCAACCTCAGGGTCCTGACCACACCCTGCTGACCACCCCCCGCAGGACAACCCGGCAGAAGAAGACCATGAAGCTGTCGCGAGCCCTCTCGGACCTGGTGAAATACACCAAGTCCGTGGGCATCCACGACGTGGAGATGGAAGGTGAGGGGCGACGGGCTCAGGGGGCCCCGGGGCGGGA----------------------------     
 5 Equus_asinus-NC_052181.1-200229_200458               81.1%  31.8%    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGGTGAGGCGTCTCCTTGAGCCCCCAGGGCC---CCTGGCCAGTCTCCCAGAACCC-CCTGTCGA-G-TTCCTGGCTGCATCATCCTGCTGCAGGTGCTCGGGTCCGGGGC-----------------------CCTG-GTC--AACGGCCC-----------ACACTGGCCAATGCCCTGAGCTCAGGTCCCCTG-GGGCCAGGCCGAGCAGGGCCCTACAAAGGATGGGGCATCCCTGGCC-GGGCAGTGTGGACGCCAGGAACCCAGAATGGCAGGCCCACCTTCTGCACCCTCCCGGCCTCTGCAGACGGCCTGGCCAGGCTTGGGACTCCATG----GGTCCTGACTCTGCCCTCCTTCTGCACAGAAAAAGAGCAGCAAG---CTGAAGACGGCGGCCAGCGTGGAGGAGGGGGACGAGGACCTGGACTCCTCAGGCAGCCAGGGCCGAGGGTCAGTGCCCTGCCTGCATCCATGGCCCTGGAAGAGACAATGGCAGCGGG---CAG-----GGCTG-----------------AGGCTGTT------------------------------------------------GTCTTGACAACAGCGGGAATCAGATGCA------------GGCCTGGTGGCGGCTCAGGGACAGTGCAGTGGGGTGTGGACCCTGGAGTG-G----------------------AGGGGCCGGACTGGCCAGCCCGG-ATCCTGTGCTGGTTTCCGTGGTGC--------------CCGTCACGGTCTGAGA-GGCTTTCTTTGGTGGGCTCAGTGCCTGCCCCCTCCCCCAGGGTCACCTCTCAGTGTGTCTGCTGCAAG---TCCTGGACCCTCCTGGAACACGGGGGTGT--AGCGGGTGTAGCGGACTCCTGATGGACGTTCTGCATGAATCAGTGATCCTGGCTGAGCCCTGGAGCCCACCTCTCGGACTGGGGCTCCCAGGCTGGCCTGAGTGGAGAGGGGTGCC-AACTCCAGGGTC---CTGACCCTGCCCCCCCTTCCCTGCAGGGCGACCCGGCAGAAGAAGACCATGAAGCTGTCACGGGCCCTCTCGGACCTGGTGAAGTACACCAAGTCCGTGGGCATCCACGACGTGGAGACGGAGGGTGAGGGGTGGCCGGGGCTGGGAGGCACCCAGGAGGGC---------------------------     
 6 Lemur_catta-NC_059130.1-186123_186340                81.8%  29.5%    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAG-------------------------------------------------------------------------CA-----GGGGCCTCCCGCCCCCAGGCCCTGGCCGGCCCCTAGTCGG--------------------GAGT-GGCGAC---------------------------------TCCACGGCCCTCTG-----------------GTCACCTCTCCTCTGGCCCACACTGGCCAGGTCCCCA----CAGCTGCCCAGAGGACACGGCC-GCAGCCGCAGTGTGCCCAG--------------------CAGGGGGGACGA---GGAGGCCGTGCGGCTG------CTCGGGAGCCCTCCCCGCCTCTG----------CCCTGGCCTGGCCCGCGTGGG----CCCACGGCTCACAGCTCTGCCCTCCACAGAAAAAGGGCGGCAAG---CTGAAGAAGGTGGCCAGCGTGGAGGAGGGGGACGAGGACCTGGACTCCCCGGAACGCCAGAGCCGAGGGTCAGTGCCCTGCCCCAGGGACAGAGTGGTCCCACCGGCACCGACCCCTCTCCCAG-CCCCTCCTCCCACTGGCCAGAGGACCACTCTGCTCTCTGTGCACCCC---------CCA--TGACCCCGCGGCCCCCTGCCTCTTCTCCACTCACCCAGACTTCACCCCGAG-TC-TCCTCCTGCTCAGAACCTTCCAGAAACCCCCACATCTCTC-AGCGCAGCCCTGGCCCCACGTCTACCTGAGTGGGT-GTTGTCCTCCCGCACACCTACGCGAGGGCCCCGGGCCTTTCTGGC-CA-CT--GCCAGCCCAGCCCGCAGCCCACCTGG-------CGCTCGCATGTCCTTGG------------CCCCCAGCACGGTCTGGGGGCGTCTCTGGGGCTCGGT-GCCTGCCCCCAGC--ACCAT--G--------C-GGTGTCCACGCCACGCCGGGAATCAGTGGCGTGTGGCACGGTGGACA------CGTGCTGGATGCTGCTGCCT--------GTGCCCTGGAG--CCCGTCTCCGGGGCTGGCGCCAGGACGGCCCCCCAGGCC-CCTGACCCTGTGGCCCCCGCAGGACGACCAGGCAGAAGAAGACCATGAAGCTGTCCCGGGCTCTCTCGGACCTGGTCAAGTACACCAAGTCCGTGGGCACCCACGACGTGGACTCGGAGGGTGAGGGGGCGCGG-GTGGGGCTGGGTGGGGCCTCCCTGTCCCAGCTCCG---------------     
 7 Phyllostomus_hastatus-NW_025334013.1-187880_188128   78.3%  28.6%    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCAGCAGACGGAACGGCCGGCTTCTTGTGAGCGGCTTCTCCAAGCGCAAGGTCTGGGGGGCTCCTGGGCCAGGGTCCCCCCCGCACCCACG-------TGC-CCAGCTGTCCCTGTGCCGGCCAGA-----GGGGCCTTCCAGCCCCCAGCGCC---C-CGGCCCACCTCCCGGGATCC-CCCTCTGA-G-TTCCTGGCTGCCCGGCGGCTGCAGGCGTGGGGTCCGA---G-C--CCCAGTT----------------------------GCTGTCCCCTGACCCACACTGGCCAATGTCCCGAGCTCCGGTCACCCGGGGCCCCAGCAGAGGAGGGCTCTGCAGAGGACAGGCAGGCCCG--CC-GGGCCGTGTGGGTGCCGGCGCCCCAGACGACCCC---------CTGCACCCCC--CCCCGCCCCGCCCCAGGCCCTGCTGATGGCCGGGCCCCC----GGCCCTGACTCTGCCCTCCCTGCACGCAGAAGAAGGGCGGCAAG---CTGAAGAAGGCGGCCAGCGTGGACGAGGTGGACGAGGAGCTGGACTCGCAGAGCAGCCAGAGCCGAGGGTCAGGGCTGCCCCTCCCCCCGAACCCCAGCCCCTGGAG-TAGACGCAGGGGCGAG-----TGCTG-----------------AGGCCGCC------------------------------------------------GCCC-GGCCGCAGCCGAAGGCAGACGCG------------GGCTCGGGGGCTGC---------------------------------TTC-CC-GGAG------------------------CCGG------------TGGGCGCGGT----------------------------------G---CTGC----CCCTCCCCGCGGCGTGTC--------------C--TCTCCGCGTGTCCACCGAGCGTCCACCACTCG---TCCGGGCACCTGGAACGT---------------GGGGCCCAGCGGATGCTTGATGGGCGTTCCGTGTGAACCAATGGAGTTGGCC-GAACCTGGAGCCCGCCTCTGGGACCGGGGTGCCCAGGCTGGCCTGAGTCGGGAGGGGTGCG-GACCCGGGGTCC-TGACCCC--CACGCCGCCCTCCCCGCAGGGCCGCCCGGCAGAAGAAGACCATGCAGCTGTCACGGGCCCTGTCGGACCTGGTGAAGTACACGAAGTCCGTGGGCACCCACGACGTGGACACGGAGGGTGAGGGGCGGGCGACCTGGGCTCTGGGGGGCCCCGGG---------------------------     
 8 Microcebus_murinus-NC_033661.1-186247_186459         78.6%  28.3%    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCCGTCCGTCACCCACCTGCCAGCAGCCCCCACCGGCCAGAGAG-------------------------------------------------------------------------CA-----GGGGCCGCCCGTCCCCAGGCCCTGGCCAGTCCCTAGTCTG--------------------GAGTGGGCACC---------------------------------CCCACGGCCCTCCG-----------------GTCACCCCCTCTCCAGCCCATACTGGCCCGGTCCCCA----CAGCTGCCCAGAGGGCCATGGCCACAGCCTCAGTGCACCCAG--------------------CGGAGGGGTGGACAAGGAGGCCACGCAGCCA------CTGGGG-ACCCT-----CCCAGC----------CTCCGCCCTGCCCTGCTCGGG----CCCACGGCTCAGGGCTCTGCCCTCCGCAGAAAAAGGGCGTCAAG---CTGAAGAAGGCGGCCAGCGTGGAGGAGGGGGACGAGGACCTGGACTCCCCGGAGCGCCAGAGCCGAGGGTCAGTGCCCCAGGACTGTCCCCGGGGTCCTCGCCGCCCCA-----CGCCCTTCTC-TAGAGTGTCCCACCCGCCAGCCGTCCGCTCTGCCCTCCACAGACACCCAATGGCCCCGAAGCCCCCTCTGTGCCCCGCGCCTCTTCTCCCCCGACCCAGACTTCACCCCGAG-TCTCCCCCCTGCTCAGAACCTTCCAGAAGCCCCATC---TCTC-AGTGCAGCCCTGGCCCCTTGTTGC-------CAGGCAGCGTCCTCCCGCACACCCACGCGAGCACCCGGGGACATTTGCGCCAC-GC--GCAGCCCCAGCCCGCATCCCGCCTGG-------CGCTCGCATTTCCTCGG------------CCCCCAGCGTGACCCGGGT-------------------------------------------------------GTCCACGCCACG-CCGGGCACCGCAGCATGTGGGGCGGTGGACA------CATGCCGGACGCTGCTGCCT--------GTGCCCTGGAG--GCTGTCTCGCGGGTCTGGCGCCAGGCGGGCCCCCCCCGACCCTGACCCCATGGCCCCCACAGGACGACCCGGCAGAAGAAGACCATGAAGCTGTCCCGGGCTCTCTCGGACCTGGTCAAGTACACCAAGTCCGTGGGCTCCCACGACGTGGACTCGGAGGGTGAGGGGCGCACGGGCGGGGGCCGGGCGGGGGCCGGTGTGGTGCCCGGA---------------     
 9 Sturnira_hondurensis-NW_023520724.1-187922_188153    78.6%  28.4%    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGGGCCAGCAGATGGAACGGCCGGCTTCTCGTGAGCGGCTTCTCCAGGCGCAAGGTCTGGGGGGCTCCTGGGCCGGGTCC-CTCCTGCACGCACA-------TGC-CCAGCTGCCCCTGTGCTGGCCAGAG----AGGGCCTTCCAGCCCCTGGCGCC---C-CAGCCCACCTCCCAGGATGC-CCCTCTGA-G-TTCCTGGCTGCCTGGCAGCTGCAGGCGTGGGGTCTGA---G-T--CCCAGTT----------------------------GCCGTCCCTGGACCCACACTAGCCAATGTCCCAAGCGCTGGTCATCCGGGCCCTGT-CTGAGAAGGGCACTGCAGGGGACCGGCAGGCCCA--GC-AGGCAGCATGGATGCTGGGGCCC-----------------------CGACGAC--CCCTGCACCCCCCCGGGCCCTGCTGGTGGCCGGGCCTGC----AGCCCTGACTCTGCCCTCTCTGCACACAGAAGAAGAGCGGCAAG---CTGAAGAAGGTGGCCAGTGTGGACGAGGCGGACGGGGAGCTGGACTCACAGAGCAGCCAGAGCCGAGGGTCAGGGCCGCCCCCCCGCCCCCAGCCCCTCGAGTAGA--CGGTGGCAGGGGCGAG-----TGCTG-----------------AGGCCGAG------------------------------------------------GTCA-GGCCACAGCCAAAGGCAGACCCA------------GGCTCAGGGGCAGG---------------------------------GCC-GG-GTGG------------------------GTGG------------GGAGGGTGGG-----------CAGG-------------CCCTGGG---CTTATT-CCCAGAGCTGTGGGTGCGG--------------T--GCCAGCTCTTCCCGGGACGTGTCCACTGCGCA---GCCTGGTACCTGAAACAC---------------AGGGCCAAGTGGATGCTCGGTGGGCATTCTGTGGGCACCAGTGAACTTGGCC-AGATCTGGAGCCCGCCTCTCGGACCGGGGTGCCGAGGCTGGCCTGAGTCGGGAGGGGCCCC-AACCTTGGGGTC-CTGACCC--CGATGCCGCCCCGCCGCAGGGCCACCCGGCAGAAGAAGACCATGCAGCTGTCCCGGGCCCTGTCGGACCTGGTGAAGTACACGAAGTCCGTGGGCGCCCACGACGTGGACACAGAGGGTGAGGGGTGGCCCGGGCTCCGGGGGCCGTGGGAGGCGGG-------------------------     
10 Carlito_syrichta-NW_007256000.1-153921_154136        92.1%  49.1%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGGGGTC------CCTGGCCCCCATGTCTAACTGTTTCCCTCAG-----------------TGCTGCCTGGAGTCGTCCAGGGCCTCAGACC--------CA-CAGGTCCAGCCAGGAGCTCCGGCC-----CCTCCCCAACCCCTCCCCA---ACCCCTCCCCA-CT-GTGGAGAGGTCACCCACCTC--------------------------CATG-CAG-GCTGCCAGGGACGCCAGGCAGGACTGGGGTTCCTGAGATCTGGGCCA---------AGTG-GGA--------AAACCGGCCACAGGGCTGCCCACGCACCACAGGGGG-----------GCT--GCTGGGGGCAGG--------CTACACTGGCTCCG--GG---GACCTCCCTCCTGGTC-ACACGCCGATCCTGCACGGCGTGAGCTCTGGTCTTCTGCACCCCTCTCCCCATCTCCCCCCTGTTTCCTTCCCCAAAT--------GCCTCCTCCGAGCCTGTCCTCCCC------------------------CCCACAA---------CCACAC----------------------ACCAGTGGGCTCTGCCCTTCC---CAC---ACAGCTAG-------ACCCTGTCA---CTACT---------GCCTGGGCGGCCCT--GGGCTTCCCGTG-CC--TCTGCCTCTCCTCCACAAGAGCGAGT-----CCAAG-TCAGACACAGGCTCCGGG-----T------CTCGTCTCTC-------CCCGGCCCAGAACCT-TCTGGAAGCCCCACATCAGCCTGAGCTGGGCA-----GTCTACCCTGTTCTCCTTCTGCACACGCACA-------TCCTGCCTGGACCCCGAGTTCCCACAGCCCCTGTTGAGGTCTGCTGG-------TCTCCAAGGGGCTCAGGGCCCATCCTGCCCTAGCACTG---CCCAA-GGGGTCACTCGTGT-------CT--G-GGCACT----------GGGAACATGGGGTGTGGTGAACTCATGAACCTGCCAAGCCCTGCCGCCTCACCTCTTGGAGCTGGGCACCAGGCTGGTCCTGAAGTGGGTGCTG-----A------CCCTGGGGTCCTGACTCCCCTGCCCTCCCCGCAGGACAACCCGGCAGAAGAAGACCATGAAACTGTCCCGGGCCCTCTCAGACCTGGTGAAATACACCAAGTCTGTGGGCAGCCACGATGTGGAGACGGAGGGTGAGGGCCATGGGGCACAGGGCAGATGGTGCGGGGCTGTGG-----------------------     
11 Globicephala_melas-NW_022134856.1-187489_187620      77.3%  26.2%    ---------------------------------------------------------------------------------------------------------------------------------------------TCCTCCCAGGCCGAGGGAGGAGGCCGGAACCAGCAGACAGAACAGCCGGCTCCTCGCGCGCAGCTTCTCGAAGCGCAAGGTCTG-------------------------------------------------------------C--------CGGGCTCCCCACGTGCGCCAGCCAGAGCTGGGGGGTCTCCTCCAGGACCGAGGG-CCTCTGGG-A-TTCCTGAGGCCCTGGTCGGGGCT-------------------GGATGGAG--------------CAGGTGCCTC--GATGGCCCTCCCCCGGTCCATGG---TCGACGCCCGGAGTGCAGGTCACCCAGGGCCCGGGCCAAGCAGGGCACTGCAGAGGG---GGCAGGCCC--GG-CTGCAGGGTGGGCGCCAGGACCCCAGGGCTGCAGGCCCTTCCCTCGCAGTGTCCTGGTCTCTGCAGACAGCCCGGCTGGGCCTGGCGCTCCAGC----AGTCCTGACTCTGCCCTGGTTCTGCACAGAAAAAGAGCAGCAAG---CTGAAGAAGGCGGCCAGCGTGGAGGAGGGGGACGAGGGCCCGGACGCCCAGGGCAGCCAGAGCCGAGGGTCAGTGCC-TGCCTCCATGCCGGGCCCCCGAAGAGGCAGCGTGGCG-GC---ACG-----CGCTG-----------------GGACCCTT------------------------------------------------GTCCTGGCGACGGTCAGCGTCACATGCGC----------AGGCTCAGGGACCCGCACGGTGGGGAGCGGCCG----------TGGGGGCC-CA-GGGCAGGGACCCCGGGGTGCAGGACCA-GACTGGC------------CAGCGCGGGTCCCTGTGC-----------------TCGTT-----TCTGT----AGCAGCTGTCGCGGTCGGCCACCTGCCCCCTCCCCCAGTGTCACCTCTCAGCACGTCCGCCGCATG---TCCTGACACCTGGAACACGG--------------GGGCATAGTGGACGC----------------------------------------------------CTGAGGG------AC-----------GCTCCCCGGAGCCTGAACAG-GGAGGCGTGCGACCCAGGTCCTGACCCCACCCCTCCCGCAGGGCCACCCGGCAGAAGAAGACCGTGAAGCTGTCCCGGGCCCTCTCAGACCTGGTCAAATACACCAAGTCCGTGGGCATCCACGACGTGGAGATGGAGGGTGAGGGGCCCCTGGGGGGCGGGGGAATCGGGGCCCTGGGGGTGGCTG-----------------     
12 Propithecus_coquereli-NW_012152752.1-187592_187809   82.4%  31.4%    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCGCTCCCAGGCCCTGGCCGGCCCCTGGTCGG--------------------GAGT-GGCACC---------------------------------TCCACGGCCCTCCG-----------------GTCACCCCCTGTCTGGCCCACACTGGCCTGGTCCCCA----C-GCTGCCCAGAGGGCACGGCC-GCAGCCTTGGTGCACCCAG--------------------CGGGGTGGACTA---GGAGGCTGTGCGGCCG------CTTGGG-ACCCTCTCAGCCTCTG----------CCCGGGCCTGGCCCAGGCGGG----CCTGCGGCTCACGGCTCTGCCCTCCGCAGAAAAAGGGCGGCAAG---CTAAAGAAGGCGGCCAGCGTGGAGGAGAGGGACGAGGACCTGGACTCCCCAGAGCGCCAGAGCCGAGGGTCAGTGCCCTGCCCCGGGGACGGTCCTGGGGTCCGCGCCGTCCCTCGCCCTTCTCCAGAGTGGATCCACCG--CCAGCTGCCGCTCTGCCCTCCGTGCACACCCGACGGCCCCTC--GGCCCCTCTGTGCCCGCGCCTCTTCTCTCCGGACCCAGACTTCACCCTGAG-TCTCCCCCCTGCTCAGAACCTTCCAGAAGCCCCCACATCTCTC-AGCGCAGCCCTGGCCCCATGTCCGCCTGAGCTGGGCGCCCTCCTCCCGCACACCCACCCGAGGGCCCAGGGCTTTTGCGGCCAC-GG--GGCAGCCCAGCCCGCATCCTGCCTGG-------TGCTCGCATTTCCTCGG------------CCTCCGGCGCGGCCTGGGGTCGTCTCTGGGGGCTTGGCGCCTGCCCCCAGCACCACCC--G--------G-GGTGTCCACGCCACACCGGGCACCGGCAGCATGTGGCGCGGTGGACA------CGTACTGGATGCGACGCCGG--------TGCCCTGGAGC--CCATTTTGCAGGGCTGGCGCCAGGCCGGCCCCCCAGGACCCTGACCCCTGTGGTCCCCACAGGACGACCAGGCAGAAGAAGACCATGAAGCTGTCCCGGGCTCTCTCGGACCTGGTCAAGTACACTAAGTCCGTGGGCACCCACGACGTGGACTCGGAGGGTGAGGGGCGCACAGGTGGGGCTGGGCGGGGCCTCCCTGTCCCAACTC-----------------     
13 Desmodus_rotundus-NW_020090861.1-202071_202290       80.5%  29.6%    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTGGGGGGGCTCCTGGGCCGGGGTTCCCCCTGCACCCATG-------TGC-CCAGCTGTCCCTGTGCTGGCCAGAG----GGGGCCTTCCAGCCCCCAGTTCC---CCGGGCCCACTTCCCAGGATCC-CCCTCTGA-G-TTCCTGGCTGCCTGGTAGCTGCAGGCGTGGGGTCTGA---G-C--CCCAGTTAGTTGC-ATGGAGCAGGGCCCC--AGTGGGTGTCCCCTGACCCACACTGGCCAATGTCCCGACCTCTGATCACTCGGTTCCCCCGCTGAGAAGGGCGCTGCAGAGGACAGGCAGGCCCA--CC-GGACAGCATGGGCGCCGGGACCCCAGATGACCCC---------CGGCA----------------CCCCCTGGGCCCTGCTGATGCCGGGCCTGT----GGCCCTGACTCGGCCCTCCCTGCACACAGAAAAAGAGCAGCAAG---CTGAAGAAGGCGGCTAGCGTGGACGAGGTGGACGAGGCGCTGGACTCACAGAGCAGCCAGAGCCCAGGGTCAGGCCCCCACCCCCGGCCCCCCAGCCCCTCGAGTAGACAGCAGCAGGGGCGAG-----TGCTG-----------------AGCCCAAG------------------------------------------------GT-C-GGCCACGGCCAAAGGCAGACTCA------------GGCTCGGGGGAGGG---------------------------------GCG-GG-GGCA------------------------GGCCAACCACGGCAGGTCCTGGGGCTTGTTCCCAGAGCTGG-------------TGGGCAC---AGGGCT-GCCCTCCTCACAGCGCCTC--------------C--TCTCAGCGCGTCCACTGAGTGTCCACTGCATG---TCCTGGCACCTGGAACAT---------------GGGGCCAAGAGGATGCTGGATGGGCGTCCTATATGGACCAATGAACTTGGCC-GAACCTGGAGCCCGCCTCTTGGACCAGGGTGCCCAGGCTGGCCTGAGTCGGGAGGGGCGCC-GACCTCGGGGTC-CTGACCCCCTACGCCGTCCTCCCCGCAGGGCCACCCGGCAGAAGAAGACCATGCAGCTGTCGCGGGCCCTGTCGGACCTGGTGAAGTACACGAAGTCCGTGGGCACCCACGACGTGGACACAGAGGGTGAGGGGCGGCCTGGGCCCTGGGCGTCATAGGGAGGG---------------------------     
14 Physeter_catodon-NC_041216.1-200563_200695           78.6%  27.6%    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGCCGGCTCCTCGTGGGCAGCTTCTCCAAGCGCAAGGTCTGCCAGGCTCCCGGGTGGGCTCCCTGCCC----------------------------CCATGTG--------CCCCAGCTGTCCCCGCACCAGCCGGAGTTGGGGGGTCTCCTCCAGGACCGAGGG-CCTCTGGG-A-TTCCTGGAGCCCTGGTCGGGGCT-------------------GGATGGAG--------------CAGGTGCCTC--GATGGCCCTCCCCTGGTCCACACTGGTCGATGCCCAGGGTGCAGGTCACCCAGGGCCCGGGCCAAGCAGGGCGCTGCAGAGGAGGGGGCAGGCGC--GG-CCGCAGGGTGGACGCCAGGACCCCAGGGCTGCGGGCCCTTCCCCCGCA-GCCTCTGGCCTCTGCAGACAGCCGGGCTGAGCCCGGGGCTCCACC----AGTCCTGACTCCGCCCTGGTTCTGCACAGAAAAAGAGCAGCAAG---CTGAAGAAGGCAGCCAGCGTGGAGGAGGGGGACGACGACCTGGACTCCCAAGGCAGCCAGAGCCGAGGGTCAGTGTCCTGCCTCCACGCCGGGCCCTTGAAGAGGCACCGCGGCA-GG---AAG-----TGCTG-----------------AGACCGTC------------------------------------------------GTCCTGGCGACAGCAGGCGTCAGACGCGC----------AGGCTCAGGGACCCGCACGGTGGGGGATGGCAGTG-------GGGGGGGCC-CA-GGGCAGGGACCCCGGGGTGCAGGGCCA-GACGGGC------------CAGCGCGCGTCCCTGTGC-----------------TTGTT-----TCTGT----AGCAGCTGTCGCGGTCGGCCACCTGCCCCCTCCCCCAGTGTCGCCTCTCAGCACGTCCACCGCAG----TCCCGACGCCTGGGACACAC--------------GGGCATAGTGGACGC----------------------------------------------------CTGACGG------AC-----------GCTCCCCGGAGCCTGAGCAG-GGAGGGGTGCGACCCGGGTCCTGACCCCACCCCTCCCGCAGGGCCGCCCGGCAGAAGAAGACCATGAAACTGTCCCGGGCCCTCTCAGACCTGGTCAAATACACCAAGTCCGTGGGCATCCACGACGTGGAGATGGAGGGTGAGGGGCCGCCGGGTGTGGGCCCCGGGGGGCGGAAATCGGGGCCCT-----------------     
15 Panthera_tigris-NC_056667.1-201162_201365            75.3%  27.1%    ----------------------------------------------------------------------------------------------------------------CGCTGTCTCTCCGTCCCCTAGGCTGAGGACGGCGTGGAGTCCGGGGAGGACACCGGTGGCAGCAGACGGAACAACCGGACCCTCATGAGCAGCTTCTCCAAGCGCAAGGTCTGGCGGGGCTCCCGGGCAGGGGCGGCCGGCTCCCCGTCCCTGTGCCCC-CCGGGGGTCCCTGGGCCGGCCCGCCGGGGAGCCCCCTTCAGCTCCCGGGACC---CCTGACCTGTCTTCCAGAATCC-CC----------CC-TAGCTACATCGTCCCACTG----------------------------GGGCTGGGGTTCAGAGCCGGCCT--CGGCACCTGGCCGGGGCTGGACGCAGCAGGCGCCTCGATGGCCA----ACCCC---CCCCCCCAA------------------------------------------------------------------CCAGGC------------------ACACCGGCCGACGCCCCCGGGTCACTGGGGGGCCCCGCG----GGGCCTCACTCCGCTGTCCTTCCGCACAGAAAAAGAGCAGCAAA---CTAAAGAAAGCGGCCAGCATGGAGGAGGGGGGCGAGGACCTGGAGTCCCAAGGCAGCCAGGGCCGAGGGTCAGTGGCCCGCCCGAACGGAACGTGGCAGCG-GGAGGCGCCCAGGC---------------------------------------CCCT------------------------------------------------GTCTGCGCGGCAGCGGGAGTTGGATGCGC----------AGGCCCCGGGTGGCGG-GGGGACCGCGCGGTGGGCCGGGGGAGTGGGGGCCCCT-GGGCGCGGACCTCGAGGGGGCGGGACCGGCCA-----GCGTCGCCCCCTGCGCTCGCTTCCAGCG----------------CCCGGTGCGGCCGGGGA-GGCATCCTTCGGTGGGGTCCGCG-----------------------------------------CCGG---CCCC-------------C-----------------------GCCCTC---------CCCCACGTCGCTCCTGGGTGGAGCCGGCTGAGGCCTGGAGCCCGCCTCCCAAGCTGGGGTGCGCCGGCTG---------------GCCTGA-GTCGGGAGGCCCTGACCCCCCGTCCCCCACCCTGTCCGCAGGGCGAGCCGGCAGAAGAAGACCGTGAAGCTGTCTCGCGCCCTCTCGGACCTGGTCAAGTACACCAAGTCTGTGGGCATCCACGACGTGGAGGCGGAAGGTGAGGGGACCGGGGCCCCCCGGGGGGGGGGCCGGGGAGGGGGA---------------------     
16 Molossus_molossus-NW_023425372.1-185804_185965       82.0%  32.3%    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGGGGGCTCTCCTCCAGCCCGCAGGC-C---CCTGGCCCACCTCCCAGAAGCC-CCACTTGA-G-TTCCTGGGTGCATCCCCGGCTGC--------AGGGGTCCGGAGCCTGGTCGGGGCTGGACGGAGCAGGC--TTC--AGTGGCCAGCCCCTGACTCACACTGGCCAGTGCCCCAAGCTTAGGTCACCCGGGGCCCC-CCCGAGAGGGGTACTGCTGGGGACAGAGAAGGCTCAGCC-ACCCCGCGTGGGCCCTGGGACTCCAGGACAA------------------------------GCCCCTGCGTGCCCCCTCCCAGCCTCTGCAGAC----GGGCCTGACTCTGTCCTCCTTCCACACAGAAAAAAAGCAGCAAA---CTAAAGAAGGCGGCCAGCGTGGAGGAGGCAGACGGGGACCCGGATGCGCAGAGTGGCCAGAGCCGAGGGTCAGGGCCTGCCCACCCAGCGCCTTGAATAGACTGCGGCAGGGGGA--------G-----TGGGG-----------------AGGCCGTT------------------------------------------------GTCC-TACTGCAGACAAAGTCAGATGTGC----------AAGCCGTCGAGGGTCA--GGCTCAGGGCGCTGGGG---CGGAAGTGGGGCC-CA-GGGCGTGGCCCCAGGGAGGGGTGGGCTGGTCG-----GGCA-GGGCCCTGGGCTTGTTCCAAGCGCCATCCCCGTCCGAGCGCCATCCCCGTCCGAGC-ACCATGGTCTGGCAGGCTCCGTGAAGCCCCT--CGCCCGGCGGCACCTCTCAGGGCGTCCACTGTGCC---CACA---------GCATGTCCTGGGACC-----------TGGACGGAAGCTTGGTGCATGTCTGCGTGAACCGGTGCACTTGGCC-GAGCCCGGAGCCGGCCTCTTAGACCAGGGTGCCCAGGCCGGCCTGAGGCAGCAGGGGCGCC-CACCTCAGGGTCC--TGACCCCGTGCCCACCCTCCCTGCAGGGCGACCAGGCAGAAAAAGACCATGCAGCTGTCCCGGGCCCTGTCCGACCTGGTGAAGTACACGAAGTCCGTGGGCACCCACGACGTGGACACGGAGGGTGAGGGGCGCCCGGGCTCTGGGGCACCGGGCAGGGCCGGGCTGCG-------------------     
17 Jaculus_jaculus-NC_059106.1-185688_185885            90.8%  44.2%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGACAGGAGGCTAGTGCTGA-----------------GGGACCCTC------------------TGGG--------CC-TGGCTACTGCCTGAGCCAT---CA-----GGTCTCAGTTCCCACCTCTTCCTCCTCTTCCCAAGGCCCCCAGCCTCATGCCCTCCT----AGGGGTCGA------A--TCTGTCTC-TAGCGTTCCCAGGTCCCCATGAGA----AGGGCTCCCGTGCTTACAGCACA--CCTGCTGGGTT---GGTGCCAGTTTGTCTGTCTGACTACATCCCACAGCACCT----------------------CTGGGGGCTCAC--------ACCTACCTGTCCAGCTTG---GACCTCCTTTCTTTTG-TGGTGGGCTTCCCCTCATCCCTCCCATTT------CTCCTCCTATCTATCTCTCTCCCTTCGCAGACCTTGTCCC--T--------CATCAATCTCAATCCTTCACACTGACACACCCAGCTCCTCTTCCCACCACGCTATGCC------TGTTTT----------------------CCCAGATCTGTCTCGGCACAT---GGC---TAGGACCC-------TGCTTGTCACT-GCTCT---------GTTTCTTTATGACA-GTGTCTCATTTTC-CC-CTGAGCAGAACCCTCCAGAAAACTTGTGTTCCTTAGA-GCAGCCCCTGACTAGACAGGCTCC------CTTAGCCTTC-------CTCTTGCGTGTTACT-TAGAAGTACTCCAGAGC--------CTTTGCA-----CCTGACGACTGCGTCATATAGCCCACATCCA-------GCCAGCTCGTTTCCACAGCCCCATCAGAGTCTG----GGAATCTGTC-------CCTGAAACAGAGTCAGTACCTGTCCTCACCTCTGCATT---GCCTGCCAGGCCTGGGCTGC-------CT--G-GG------------------ATGTGTGATTTGGGGAGCAGATGAACTGGCGTGGGTCCTGGATCCCAACTCACAGAGCTGAATGGCAGGCTGGCCCTGGATGGGAGGGAT-----GCAGCTGAAGGGTCCTGAGCAGCCCTGCCGCACCCTCGCAGGACAGCCCGGCAGAAGAAGACCATGAAGCTGTCACGGGCCCTGTCAGACCTGGTGAAATACACCAAGTCTGTGGGCACCCACGACGTGGAGACAGAGGGTGAGGGCCATGGGGCGGGTGGGACTGGGCAGGAGGGCT--------------------------     
18 Manis_javanica-NW_023436200.1-187863_187983          66.8%  20.5%    CAGCTCCCAGGCAGCTGCCTCAGTGCACCCAGGCCCGTTCAGCTCCCTGCCTCCTGGAAGGCTGCCTGGGCTGCCCCGCCCTACCTGGTGCAAAACTGGGCTCACTCTGCGCCCCTGTCTCCCCGCCTTCCAGGCTGAGGAGGATGCGGAGTCTGGGGGGGATGCTGGAGCCAGCAGGAAGAACAGCCGGCTTCTCGTGGGCAGCTTCTCCAAGCGGAAGGTCTGGGGGGCTCCTGGGCTGGGGT------------------------------------------------------------------------------C---CCTGCCCTCATGTGCCCTAGCTGGCCCTGTCTC-TGTGCCCCAGGACCCCCCTAAAG----------------------------TGCCTTGAGTCCCGAGT-------------CCTGGTCAGGGTGGAACGAAGCAGGTGCCTTGTGGCCTC----TGTTGGCTCACACCGGGCAATGCCC---------AAGTTCAGGGTCACCCA-GGGCCCTGCTGAGGAC---GGGTAGGCCCACCTCCCACACCCTCA----------TGGCCTGGCAGACAGCCTGGCCGCACCTAGGGCTCTGTG----GGTGCTGACTATGCCCTCCTTCCCCCCAGAAAAAAAGCAGCAGG---CTGAAGAAGGTGGCCAGCGTGGAGGACGGGGATGTGGACCCGGACCCCCAAGACAGCCAGAGCCGAGGGTCAGTGCCCCGCCCCCAGCCCAGGCCCTGGAAGAGGCAGCGGCAGCT---------------------------------------GGAA------------------------------------------------GTGCCCAGGCCATCGTC--CTG-----GC----------AATGCTGGGGTCCCA-------------TGTGCGCCCAGGGA-------CAGC----GTAGTGAC-TAGGGGGGACGGGGCCAGGGC-----AGGGGGCC--------------GACGGG----------------CCCATCCTGGTGGGGGA-GGCGTT-------------------------------------------------------------------------------------------------------------------------------------CCGTGGTGGG----------CTTGGCACTGCCCGCCCCCCAGT-----GTCACACCGC---------------AGCCGG-GCTGACCCCCGGGTCCCGCCCTGCCCCTGCCCTCTGCACAGGGCCGCCCGGCAGAAGAAGACCATGAAGCTGTCCCGCGCCCTCTCGGACCTGGTGAAGTACACCAAGTCTGTGGGCATCCATGACGTGGAGATGGAGGGTGAGGGCGATGGGGGCCCGGGCACAGGGGGGCCACCGCTCCTGGGC------------------     
19 Camelus_ferus-NC_045708.1-201036_201148              79.8%  27.9%    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCGCAAGGTCTGGGGGCCTCTGGGTGGGGCCCTGC-------------------CAGAGTGCAGCATGCTTCTTGCCC----------------------------CCGTGTG--------CACCAGCTGCCCCTGTGCCAGCCAGAGGTGGGGGTTTTCCTCCAGCCTCGAGGG-CCCCTGGG-A-TTCCTGGCTGCATCTCCTGACTG-------------------CAGGTGCTAGGTTTGGAGTCCTGGTCAGGGCT--GGATGGAGTAAGTGGCCTCATACTGGCCAGTGCCCAGAGCTCAGGTCACCCAGTGCCCAGGCCAAGCAGGGCAAGGCAGAGGACGGGGCAGGCAG--GC-CTGCAAGGTGGGCGCCCGGACCCACGGACGGCAGGCCCACCTCCAGCACCCTCCCGGGCTCTGCCGATGGCCCGGCCGAGCCTGGAGCTCCACA----GATCCTGACTCTGCCCTCGTTCTGCACAGAAAAAGAGCAGCAAG---CTAAAGAAGGCAGCCAGCGTGGAGGAGGGGGACGAGGACTTGGACCCCCAAGGCAGCCAGAGCCGAGGGTCAGCGTCCTGCCCCCACCCCGGCCCCTGGAGGAAACAGCAGTGGG-GG---AGG-----TGCT--------------------------------------------------------------------------GTCCTGGCAACAGCAGGAGTCAGCCGCGC----------AGGCTCAGGGACCGCACAGCGGGGAGGGGGCG-----------TGGGGGCC-TG-GGGCATGGACCCTGGAGCGCAGGGGCTGGACTGGCCAGTGGG---TCCTGTGCTCGTTTCGTAGC-----------------CCGTC-----ACGGTC-AGCGCCCTTTGGTGGGCTCAGCACCTGCCCCTCCCCACCGTGTCAGCTCTCAGCGTGACCACTGCGTG---TCCCGACACCTGGAACACGG--------------GGGCGCAGTGGACGC----------------------------------------------------CTGATGG------AC-----------ATTCAGCATGAATCAGGG-------CCCGGCCTGCCTGACCCCGTCCCCGCCCTCCCCGCAGGGCTGCCCGGCAGAAGAAGACCATGAAGCTGTCCCGGGCCCTCTCGGACCTGGTGAAGTACACCAAGTCCGTGGGCACCCCTGACGTGGAGACGGAGGGTGAGGGGCCAGCAGGGCACGGGGCCGGCCGGGGGGGGGGGCGGGGC------------------     
20 Hipposideros_armiger-NW_017731634.1-185605_185830    79.1%  29.3%    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCCCACCTGCCCCTCTGT----------------------------CCCTGTGCCAGCCAGAGTGGGGGTCTCCTCCAGCCCCCAGA-------------------------ACC-CCCTTCGA-G-TTCCTGGCTGCATCGTCCGGCTGCAGGTGCTGGGGTCCGGAGCCCTGATCGGGGCTGGATGGAGCAGGTG-CCT--CAGTGGCCCTCCCTGACCCACACTGGCCAGTGCCCTGAGCTCAGGTCACCTG-GGGCCCGGCTGAACAGGGCCCTGCAGAGGACGGGGCAGGCCCGGCC-AGGCAGCGTGGGCGCCAAGATCCCCGGACCGCAGCCCCGCCTCCCGCACCCGCCCAGCCTCTGCAGGTGGCCTGGCCGCACCCGGGGCTCCACA----GCTCCTGACACTGTCCTCCTCT--CACAGAAAAAGAGCAGCAAG---CTGAAGAAGGTGGCCAGCGTGGAAGAGGCGGACGACGACCTGGACTCGCATGGCAGCCAGGGCCGGGGGTCAGTGCCTGCCCCGCCGCAGACAGTGGCAG-----------------T---GGG-----AACTC-----------------GGGCCGTT------------------------------------------------GTCCTGGCAACAGTGGGAGTCAGCTGTGC----------AGGCCATGCGGGAGCTGGGGCGGGGGGGGG---------------------------------------------GGGGACCGGCCTGGCCACGGCGGTTCCCTGGCCTTGTTCCCGAAGCGC--------------CCATCACT--GTCAGA-GGCGTTCTCCGGTGGGCTCGGCTCGTGCCCT--CCCCCAGCGTCACCTGTCAGCGCGTCCACTGCGTG---TTCACGGCACGTCCCGGC-GCCTGGAACA--CGGGGGCCAAGTGGACGCTTGGTGGATGTTCTTTGTGAATCAATGAAGCTGGCA-GGACGTGGAGCCCGCCTCTCGGACCAGGGTGCCCAGGCTGACCTGAGTGGGGACGCCTGCT-GACCCCGGGTCC---CGCCCGCACTCCCAACCTTCCTGCAGGGCCACCCGGCAGAGGAAGACCATGCAGCTGTCACGGGCCCTGTCGGACCTGGTGAAGTACACCAAGTCTGTGGGCTCCCACGACGTGGACACGGAGGGTGAGGGGCGGCCAGGACTCGGGGGGGGGGGGTAGGGGG--------------------------     
21 Mirounga_leonina-NW_023270447.1-198739_198880        80.6%  30.1%    --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGT----------------------------CCCTGGGCCGGCCAGCCGGGGCATCCCCTCCAGCTCCCAGGGCC---CTGGGCCTGTCTCCTGGAATCC-CCCTCTGG-A-CTCCTAGCTACCTGGTCTGACTGGGGCTGCACGGGGTAGAGGC-----------------------CTT-------GATGGCCCTCCCCTGGCCCACACCAGCCCATGCC-----CCCGGGTCACTCGGGGCCCAGGCCGACCAGCATACTGCAGAGGACC-GGCGGGCCCAGCC-TGGCAGCTGGGGAACCAGGACCCCCGGATGGCAGGCCTGCCTCCTTCACCCTGCCGGCCGGTGCAGGTGACTCGGCTGAGCCAGGGGCTCCACG----GGGCCTGACTCGGCTCTCCTTCTGCACAGAAGAAGAGCAGCAAG---CTAAAGAAAGCGGCCAGCATGGAGGAGGGGGATGAGGACCCGGACTCCCAAGGCAGCCAGAGCCGAGGGTCAGTGCCCTGCCCCAGCCTGGCCCCTGACCAGAGTGGTGGCAG----G---AA----------------------------GTGCTCGT------------------------------------------------GTCCCTGCGACAGCTGGTGTTGGATGCGC----------AGGCTCCGCGGTGGCCCCGTGACCGCACAGTGGGGTGGGGGAGGGGGAGCC-CA-GGGTGTGGACCTCCGGGTCTCGGGGCCAGACTGGCCAGCACGGGCCCCCGTTCCTG--CTCCTAGCGC--------------CTGCCGCGGTTGGAAA-TGCGTTCCTGGGTGGGCTCGGCGCTGGTGCCTGC---------CCCTCCCCCTTGTCCTTCCTCAGTG---TCCTGGCACCTACACCAG------GGCGT--A---------GTGGGCGTTAGGGAGACGTTCTGCATGAATCAGT------------------GAGCCTGGCTCGCAAACCGTGGTGCCCAGGCTGGCCTGAGTCGGGAGGGGCGCC-CACCCTGGGGTCCTGACCGCTGTTGCCCACGGTCCCCGCAGGGCGAGCCGGCAGAAGAAGACCATGAAGCTGTCCCGCGCCCTCTCGGACCTGGTGAAGTACACCAAGTCTGTGGGCATGCACGACGTGGAGGCGGAGGGTGAGGGGACGAGGGCCCTGGGGGCGTGGGGGAGGGCTGGGCCACG-------------------     
22 Rousettus_aegyptiacus-NW_023416284.1-188001_188145   77.7%  28.9%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCCTCCCGGGAGCCGTTTCTCCAAGCGCAAGGTCCAGCTGGGCTCCCCGCCCCCACCGGCCGT----------------------------CCCCGTGCCCGCTGGCGCGGGGGTCTCCTCCAGCCCCCGGGCCC---CGGGCCCCCCCGCCCAGCACCT-TCCTTGGG-G-GTCCCGGCGGCAGCGGCA---------GGGGCTGGGGTTGCAGCCTGCTCGGGGCTGGATGGAGCAGGTGCCTC--AAAGGCCCTCCCCTGACCCACACTGGCCACTGCCCTGAGCTCAGGTCACCCGGGGCCGCGGCCGCGCAGGGCACTGGGCAAGGTGGA-------------------------CGCCGGGACCCCGGAAGGGCAGCCCACCTGCC--------CGCGGCCTCTGCAGC------GGCCG--GGCCGGGCTCCACA----GGCCCTCACAC---CGCTGCCTCCTGCAGAAAAAGGGCAGCAAG---CTGAAGAAGGTGGCCAGCGTGGAGGAGGTGGACGGGGACCTGGACGCGCAGGGCGGCCCGAGCCGAGGGTCAGTGCCCCGGGCGGACAGCGGTGCGGGGCGTGCCGAGG----------------------------------------------CCTC------------------------------------------------GTCCCGCCGGCGGCAGCAGCGCGAA---------------GGCCCGGGGCGGGT---------------------------------------------------------------CCCCGGCTCGTCCTGGGCGGGTCCCC-GGCTCGTCCC-------G--------------GGGCCGGCACGTCGCA-GGCGTCCTCGGGTGGGCTCGGCGCCCGCC-CTGCCCCCAGTGTCAGCTCTCGGCGGGTCCCCTGCACG---TGCTCCGCCCGTCCAGGCTCCTGGAACGTGGGGCAGAGGGGGCACCCGCGCGAGGCACGTTCTCCGTGAATCCGTGAACCCGGCC-GGACCGGGAGCCCGCCCCTCAGACCAGGGCACCTGCGCAGGCCCGAGCGGGGCGGGGTGCT-CACCTCAGGTCC---TGACCCCGGCCCCGTGCGCCCCGCAGGGCGACCCGGCAGAAGAAGACCATGCAGCTGTCACGGGCGCTGTCGGACCTGGTGAAGTACACCAAGTCCGTGGGCACCCACGACGTGGACAGCGAGGGTGAGGGGGCCGCGACTCGGGGGCCGCGGGGAGGGCCGGGCGGCCGCC-----------------     
23 Ceratotherium_simum-NW_004454172.1-200143_200297     82.0%  30.9%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTCCTCCAGCCCCCAGGGCA---CCTGGCCTGCCTCCCAGAATTC-CCCTTCGA-G-TTCCTGGCTGCATTGTCCGGCGGCAGGTGTGGGGGTCTGGAGC-----------------------CCTG-GTC--AACAGCCCTCCCCTGGCCCACACTGGCCAATGCCTCGAGCTCAGGTCACCTGGGGCCCAGGCTGAGCAGGGTCCTGCAGAGGATGGGGCAGGCCCAGCC-AGGCAGTGTGGGTGCCAGGACCCCAGGATGGCTGGCCCACCTTCTGCACCCTCCTGGCTTCTGCAGACAGCCCGACCAGGCCTGGGGCTCCATG----GGTCCTGACTCTGCCCTCCTTCTGCACAGAAAAAGAGCAGCAAG---TTGAAGGCAGCGGCCAGCGTGGAGGAGGGGGATGAGGACCTGGACTCCCCAGGCAGCCAGAGCCGAGGGTCAGTGCCCTGCCCCCACCCCTGACCCTGGGAGAGACAATGGCAGCGGG---CAG-----TGCTG-----------------AGGCCGTT------------------------------------------------GTCCTGGCAACAGCGGCAGTCAGATGCGC----------AGGCTGGGTGGTGGCTCAGGGACAGCGCAGTGGGATGTGGATGCTGGGGCA-G----------------------AGGGGCCGGACTGGCCAGCAAGGATCCCTGTGCTGGTTTCCGTGGTGC--------------TCGGCACGGTCTGAGA-GGCTTCCTTTGGTGGGCTTGGTGCCGGCCCCCCGACCG--TGTTACCTCTCAGTGTGTCCACTGCGTG---TCCTGGCACCTGGAACAG------GGCGT--GGTGGGTGTGGTGGACTC----TCGATGGACGTCATGAGTCAGTGATCCTGGCCAAGCCCAGGAGCCTGCCTCTTGGACTGGGGCACCCAGGCTGGCCTGCGTGGGGAGGGTCCT--GACCAGGGGTCC---TGCCCCCTGCCCCCGCTTCCCTGCAGGGCAGCCCGGCAGAAGAAGACCGTGAAGCTGTCGCGGGCCCTCTCAGACCTGGTGAAGTACACCAAGTCCGTGGGCAGCCACGATGTGGAGACGGAGGGTGAGGGGCGGCCGGGGCTGGGGGTGTTGGGGAGGCAGGGCCCTG--------------------     
24 Dipodomys_ordii-NW_012267222.1-185975_186097         90.4%  40.5%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGACGCC------CCAGGAGGCCA-------------GAGCCGA-----------------GGGTCAGTGCCCTGC------------TGTG--------GC-AGACTT------------------------CTGTCCAGTCCCA--GGG--------TCCGCCAGCCACGGACCCCTCACCCATCTC----TCAGGGCGC------C--CCTGGGAGGCTGGGCAGGGTGCTTCCCCCCCGCCCCCGCCGCCCCGTAGGCCTCCGAGGAGGCAGAGGGGGCTGAGGCTCTGGGGCTGGGGCTGGGGCACAGACCTGTGCACGGCTAGGACT---------CTGTAGCTGGGGCACCAGGACT---GGGCTGCCTGATCCCAAGG---GACCCCCCCCCCGCCC-TGCTCCGCCTCCCA---GG----ACGTAG------CTCCCACCCCTTCCCGAGCGCCCGCCCCACACCTTGCC-CAGG--------GCCACATCTGCTC--CTGGCCCTCCCAGGCCCTGCTCACGTCTCC---GCGGGCT-------------TC----------------------CCAGA--GCATCTCCGGGTCT---CAC---CAGCGTTT-------CACACCTCC--ACTTCC---------AACTTGGAGGCCCCCAAATCATCCTCCCACC-CTCACCGCTCCCCTCCCATCGCTCTCTCAGGGCTGCACATAGTCCCTGCT-ACCCTCGC--C------CCCAGGTCCT-------CTCCCTGTGGTACCT-GACTACA-CCCCTCAGCAC-TCCCGCATGG-------------------CTGGCAGCCCCCCCACACC-------TGCTGATGAGTTCCAGGACCTTTACACT----------TACTGGTAG-------CTCTCAGCCAGGCCATGCCCAGCAGTGCCGTTCCACGG---TCCCCATGTGGCCTGGTTGT-------CT--G-CCCTGGG---CAGAGCCAGTACCTGCCCCCACTGCACACCGTCTCGAGGCCCGGCTGCTGGAGAGCAAGGGCCCAGCCTGGGGTCCGGGCCAAGCTGCCAG-GCCAGGCC-----C--CAGCCCGCTCTGAAGGGCCTGGCCCCTGCCACCCACAGGACGGCCAGGCAGAAGAAGACCATGAAGCTGTCCCGGGCCCTCTCCGACCTGGTGAAGTACACCAAGTCCGTGGGTTCCCACGACGTGGAGGCGGAGGGTGAGGGCTGCGTGGCGGGCGGGTGGTGTGGGAGGTGGCCCGGCCCG------------------     
25 Hyaena_hyaena-NW_024080942.1-200755_200941           79.1%  28.5%    -------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGACACCGGTGCCGGCAGACGGAACAACCGGATCCTTATGAGCGGCTTCTCCAGGCGCAAGGTCTGGGGGGTCCCGGGCG--GGGGCAGCCTGTTCCCTGTCCCTGAGTGCC-C--AGGGTCCCCGTGCCGGCCGGCCGGGGAGCCTCCTTCAGC-CCCGGGACC---CCTGACCTGTCTTCCCGAATCC-CGCTTCGGGC-TCC-TAGCTGCACCCCCCCGCTG----------------------------GGGCTGGCGTTCAGAGCTGACCT--CAGTACCCGGCGGGAACTGGACACGGCAGGTGCCTCGATGGCCA----CCTCC---CCCACCGGCCAACGCCCCTGGGTCCCTCGGGGCCCAGCAACTG-GCACACTGCAGAGGAC---AGGCAGGCCCAGCCAGGCAGCACGGATGCCAGGCCCCCGGGATGGCAGGTGGCCTGGCAGAGCCCGGGCCCCACG----GGGCCTCACTCCGCCATCCTTCCACACAGAAAAAGAGCAGCAAG---CTAAAGAAAGCGGCCAGCATGGAGGAGGAGGCTGAGGACCTGGACTCCCAAGGCAGCCAGAGCCGAGGGTCAGTGCCCTGCCCTGGACCCACGGGGGCAGTGGGAAGGGCCGGGTC---------------------------------------CCTT------------------------------------------------GTCTGTGCAGGAGCGGGAGCGGGCGT-GC----------AGGCCCTGGGTGGC-----------------------AGGGGGCGGGGGCACCT-GGGTGTGGACCTCTGGCGGGGCCGGACCGGCC-----AGCGTCCACCCTGCGCCCGCTTCTAGCG----------------CCCGATGCGCCTGGGGA-GGCATCCTTCGGTGGGCTCTGCG-----------------------------------------CCAG---CACC-------------C-----------------------GCCGCT---------CCCGCATGCCAGGCCT----------------CGGGGAAGCCTGCCTCGCAGACTGGGGCGCCCGGGCTG---------------GTCCGG-GTGGGGGGCTC--CTGACCCCTGTCCGCACCCGCTCTGCAGGGCGAGCCGGCAGAAGAAGACCATGAAGCTGTCGCGCGCCCTCTCGGACCTGGTGAAGTACACCAAGTCTGTGGGCATCCACGACGTGGAGGCGGAAGGTGGGGGGCCGGGCGCCCGGGGGGCCGGGGCGGCGGGGTGCTGGCC-------------------     
   clustal                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     .****.  . ..******..******.**.*.***** ** ** ** ** ******** **.***** **.** ****     *. ** .*.**    **.****.* *