Job

PLCH2_human-child_55

Submission Status: Success!

Full Status

1. Iteration

Blast

Select Sequences

Alignment

RNAcode

Input

AGGCAGCCCTGGGTTCGGCGGGGGGCAGGCAGGGTAGCCCTGGATGTGTCTGCTACTTATACAGCGGTAGGAAGGCTCACAGTGGTTTCCTGGGGTTCCCCAGCTCAGAACCCGCCTCAGGGAGTGCCCACCTGGAGCCGTGTGTCTGATTAGGGATACCCGCGCACTGCGGGAACAGGTCAGGGCCGTGGAATGCTCGTAAAAGGGTTGCGCAAGCAGGCCTGGCCGAGCAGTATTCCAGGCACACAAACGCAGTTATTACGTAGTCACCACTGGTGGGAAAAAAGGATTCAGAACTTAACGAGTTTAAAACAACACATGAGAGACGCTGAGGCAGGTGTGAGCGAATGTTTCCACCGGGGCCTGACTTTCAGGCCGCTTCTCCTCGGCAGCTGCCTCTGCCCCAGGGTGGACTGGGAACGGCTGCCACGGGGGCTCCCCAACCTGTCCCCGCCCTGCCCTCCCCTCCCGTCTGCCTTACTCCAGACCTGGCTCAAGCCCACCTCTTCCAGGAAGGCCTTCTGGGACCACCAGGGGCTGTCCCGGCCTCCCTGCCTGGTTCAAGGCTAGACTCACCTTGTCCCTGTCTCTCCCCTGGACTCAGAGCAAGGCTGAAGAGGACGTGGAGTCTGGGGAGGATGCCGGGGCCAGCAGACGCAATGGCCGCCTCGTCGTGGGAAGCTTCTCCAGGCGCAAGGTCCGGCGCAGCTCCCAGGCCAGGGTCCCGGTCTGGGCCCAGTGTCCTCCCTGCTCCCAGTGCCCCGTGTCCTCCCTGCTCCCAGTGCCCCGTGTCCTCCCTGCTCCCAGTGCCCCAGTGGGCCCTGCCCCAGCCAGAGCAGATGGGGGTCTCCTCCAGTCCCCAGGGTTCCCAGCCTGGCTCACAGGATCCCCTCTGAGTCAGGCCGAGCTATCGGTTGCAGGTGCCAGGGACTGGGCCAGAAGCCTGGGCTCGGAGCTGGTGGGAACAGGTGCCTGGCTGGCTCACATCCCTTCTCTGGCC

Selection Arguments

Sequences in the aligment must have a pairwise distance to any other sequence of 10.0%.

Sequences can only have pairwise distance to the input sequence of 60.0%.

Sequences are searched in the RefSeq Representative Genome Database.

Results

Coding Regions.

High Scoring Segment plot

Distribution of HSS in the input sequence

HSS Segment Plot

Filter regions

p-val
Select the result by p-value. Show only results which have a lower p-value than provided. Must be above 0 and below 0.05. Check the box if you wish to see only the best segment in a group of multiple overlaping segments. Often a strong conservation signal can be observed as a shadow on the opposite strand.

Result Table

HSS id Strand Frame Length Start End Score P Show Result
1 0 + 2 36 27601 27708 32.644 3.621e-10 Plot
2 1 - 1 15 27612 27656 13.783 0.002 Plot
3 2 - 2 16 27637 27684 11.353 0.015 Plot

Predicted protein sequence Download sequences as fasta

HSS id Sequence
1 0 QSKAEEDVESGEDAGASRRNGRLVVGSFSRRKVRRS
2 1 RLLAPASSPDSTSSS
3 2 EASHDEAAIASAGPGI

Alignment Info

Alignment Tree

Alignment Tree

Full Alignment

Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%
                                                            cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         ] 1310
 1 Target                                                100.0% 100.0%    ----------------------------------------------------------------------------AGGCAGCCCTGGGTTCGGCGGG-GGGCAGGCAGG---GTAGCCCTGGATGTGTCTGCTACTTATACA-GCGGTAGGAAGGCTCACAGT--GG-TTTCCT------------------GGGGTTCCCCAGCTCAGAACC-CGCCTCAGGGAGTGCCCACCTGGAGCCGTGTGTCTGATTAGGGAT-ACCCGCGCACT---------GCGGGAACAG-GTCAGGGCCGT--GGAATGCTCGTAAAAGGGTTGCGCAAGCAGGCCTGG-----------CCGAG-CAGTATTCCAGGCACACAAACGCA-----GT-TATTACGTAGTCACCACTGG--TGGGAAAAAAGGA----------TTCAGA-ACTTA---ACGAGTTTAAAACAACACATGAGAGACGCTGAGGCAGG-TGTGAGCGAATGTTTCCA-----CCGGGGCC----TGACTTTCAGGCCGCTT-CTCCTCGGCAGCTGCCTCTGCCCCAGGGTG------------GACTGGGAACGG-----CTGCCACGGGGG--CTCCCCAACCTGTCCCCGCCCTGC--CCTCCCCTCCCGTC-TGCCTTACTCCAGACCTGGCTCAAGCCCACCTCTTCCAGGAAGGCCTTCTGGGACCAC----------------CA-GGGGCTGTCCCGGCCTCCCTGCCTGGTTCAAGGCTAGACTCACCTTG----TCCCTGTCTCTCCCCTGGACTCAGAGCAAGGCTGAAGAGGACGTGGAGTCTGGGGAGGATGCCGGGGCCAGCAGACGCAATGGCCGCCTCGTCGTGGGAAGCTTCTCCAGGCGCAAGGTCCGGCGCAGCTCCCAGGCCAGGGTCCCGGTCTGGGCCCAGTGTCCTC----------CCTGC-TCCCAGTGCCCCGTGTCCTC-CCTGCTCCCAGTGCCC--C-GTGTCCTCCC-TGCTCCCAGTGCCCCAGTGGGCCCTGCCCCAGCCAGAGCAGA----TGGGGGTCTCCTCCAGTCCCCAGGGTTCCCAGCCTGGCTCACAGGATCCCCTCTGA--GTCAGGCCGAGCTATC-GGTTGCAGGTGCC--AGGGACTGGGCCAGAAGCCTGGGCTCGGAGCTGGTGGGAAC---------AGGTGCCTGGCTGGC------TCACA--TCCCTTCTCTGGCC----------------------------------------------------------------     
 2 Cercocebus_atys-NW_012001716.1-219608_220568           94.9%  76.3%    --------------------------------------ATGAGT--------GAGCAGT----TGGTGA---TGTGG--CCCGGGGTTCA---TCGGG-GGGCAAGCAGG---GGAGCCCTGGATGTGCCTGCTGCTTATACA-GTGGTAGGAAGGCTCACAGT--GG-CTTCCT------------------GGGGTTCCCTGGTTCACGGCC-CGCCTCAGGGAGCAC-CCACTGGAGCTGTCTGTCTGATGACGTGG-TACCTGCGCGTTATGGGAACAGGTCAGGGC-GGCAGGGCCAC--GGAACGCTCGTAAAAGGGTTACGCAAGCAGGCCTGG-----------CCGAG-GAATATTCCAGACACACAAATGCA-----GT-TATTATGTAGTCACCACTGG--TGGAGAAAAAAGA----------TTCCGA-ACTTA---ATGAGTTTAAAATAACGCATGAGAGACGCTGAGGCAGG-TGTGAGCACATGTTTCCA-----CCGGGGCC----TGCCTTCTAGGCTGCTT-CTCCTCAGCAGCTGGCTCTGCCCCAGGGTG------------GACTGGGAACGG-----CGGCCACGGGGC--TCCCC-AACCTGTCCCCGCCCTGCCCTCTCCTCCCCCGTC-TGCCTTACTTCAGACCTGGCTCAAGCCCACCTCCTCCAGGAAGGCCTCCTGTGGCGAC----------------CAGGGAGCTGTCCCGGCCTCCCTGCCTGGTTCAAGGCTGGGCTCACCGTG----TCCCTGTCTCTCCCTTGGACTCAGAGCAAGGCTGAAGAGGACGTGGAGTCTGGGGAGGATGCTGGGGCCAGCAGACGCAACGGCCGCCTCGTCGTGGGAAGCTTCTCCAGGCGCAAGGTCCGGTGCAGCTCCCAGGCCAGGGTCCCCGTCTGGGCCCAGTGTTCTC----------CCTGC-TCCCAGTGCCCCGGTGGGCC-CTGCCCCAGCCCCCAG--G-G---------------------------------------------TTCCCAG----CCCCCAGGGTTCCCAGCCCCCAGGGTTCCCAGCCTGGCTTGCAGGATCCCTTCTGA--GTCGGGCTGAGCTATC-GGCTGCAGGTGCC--AGGGACTGGGCCAGGAGCCTGGGCTTGGAGCTGGTGGGAAC---------AGGTGCCTCGCTGGC------TCACA--TCCCTTCTCTGGCCCACGCTGGCCCTTGTCC-----------------------------------------------     
 3 Trachypithecus_francoisi-NW_022681457.1-213557_214420  92.0%  69.7%    -----------------------------CCTAGGAGGCGGAGC--------TTGCAGT----GAGCTGAGACCCGGCCACTGCACTCCAGCCTGGGC-GGCAGAGCGAG---ACTCCGTCTCAAAAAAAAAAAAAAAAAAAA-AAAAAAGGAAGGCTCACCGT--GG-CTTCCT------------------GGGGTTTCCTGGTTCACGGCC-CGCCTCAGGGAGCGCCCACCTGGAGCTGTTTGTCTGATTACGTGG-GATCTGCGTGTTACGGGAACAGGTCAGGGC-GGCAGGGCCAC--AGAACGCTTGTAAAAGGGTTACGCAAGCAGGCCTGG-----------CCGAG-GAATATTCCAGACACACAAATACA-----G--TATTATGTAGTCACCACTGG--TGGGGAAAAAAGA----------TTCAGA-ACTTA---ATGAGTTTAAAATAACACAGGAGAGACGCTGAGGCAGG-TGTGAGCAGGTGTTTCCA-----CTGGGGCC----TGCCTTCCAGGCTGCTG-CTCCTCAGCAGCTGGCTCTGCCCCAGGGCA------------GACTGGGAACGG-----TGGCCACGGGGC--TCCCC-AACCTGTCCCCGCCCTGCCTCT--CCTCCCCGTC-TGCCTTACTTCAGACCTGGCTCAAGCCCACCTCTTCCAGGAAGGCCTTCTGTGGCCAC----------------CAGGGAGCTGTCCCGGCCTCCCTGCCTGGTTCAAGGCTGGGCTCACCTTG----TCCCTGTCTCTCCCTTGGACTCAGAGCAAGGCTGAAGAGGACGTGGAGTCTGGGGAGGATGCCGGGGCCAGCAGACGCAACGGCCGCCTCGTCGTGGGAAGCTTCTCCAGGCGCAAGGTCCGGCGCAGCTCCCAGACCAGGGTCCCCGTCTGGGCCCAGTGTTTTC----------CCTGC-TCCAAGTGCCCCAGTGGGCC-CTGCCCCAGCCC------------------------------------------------------------------------------------CCAAGGTTCCCAGCCTGGCTTGCAGGATCCCTTCTGA--GTTGGGCTGAGCTATC-GGCTGCAAGTGCC--AGGGACTGGGCCAGGAGCCTGGGCTAGAAGCTGGTGGGAGC---------AGGTGCCTCGCTGGC------TCACA--TCCCTTCTCTGGCCCATGCTGGCCCTTGTCCCAAGCTCAGGTGCC-------------CTG-----------------     
 4 Callithrix_jacchus-NC_048389.1-199334_200284           93.0%  67.5%    -------------------------------------------CTTTGGGATGAATGAG----CAGTTTGGATGCAGCCCTGGGTTGGGCAGGGGCAG-GGGCAGGGAGC---GGAGCCCTAGTTGTGCCTGCTGCTTGCACA-GCAATCAGAAGGCTCACAGT--GG-CATCCT------------------GGGGTTCC-CGGCTCAGAGTC-TGCCTTGGGGTGCGCCCACCTGGAGCTGTTTGTCTGATGAGGTGA-TACCTGCGTGCTGTGGGAA-GAGGCCCAGG-CAGAGGGCTGA--GGAATGCTCATAAAAGGGTTTCGTAAGCAGCCCTGG-----------CCGAG-GAATATTCCAGACACACAAATGCA-----TT-TATTATGCAGTCTCCACTGG--TGGGGAAGAAATT-----CAGAATTGGGA-ACTTA---ATGAGTTCAAGACAACACAGGAGGGAGACTGAGGCAGC-GTG-AGTGAATGTTCCCC-----CCACAGGC----CTGCCTCCCAGGGCCTT-CCCACCAGCAACTGCCTCTGCCCCAGGGTG------------GACTGGGAACAG-----CAGCCACAGGAG--CTCCCCAACCTGGCCCCACCCTGCCTTTC---------------TGCCCCCAGG---CCTTTCAAGTCCACCTCTTGCAGGAAGGCCTCCTGGGGCCAC----------------CAGGGAGCTGCCCCAGCCTCCCTGCCGGGTTCAAGGCTGGGCTCACCCTG----TCCCTGTCTCTCCCTTGGACTCAGAGTAAGGCTGAAGAGGACGTGGAATCTGGGGAGTACGCTGGGGCCAGCAGACGCAACAGCCGCCTTGTCGTGGGAAACTTCTCTAGGCGCAAGGTCTGGTGCAGCTCCCAGCCCAGGGTCCCCGTCTGGGCCCAGCGTCCTT----------ACTGC-TCTTAGTGCCCCAGCGGCCC-CTGCCCCAGCCA------------------------------------------------------GAGCAGA----TGGGGGTCTCCTACAGCCCCCAGGGTTCCCGGCCTGGCTTGCAGGATCCCCTCTGAGTCTTGGGCTGAGCGGCC-GGCTGCAGGTGCC--AGTGGCTGGGCCAGGAGCCTGGGCTGGAAGCTGGTGGGAGC---------AGGCGTCTTCCTGGC------TCATT--CCCGC-CTCTGGCCCTCACCCCAAGCTCA----------GGTGCC-------------CT------------------     
 5 Saimiri_boliviensis-NW_024100927.1-199384_200292       88.8%  63.5%    ----------------------GGTGGCTCCATTGGGACTGAGCTTTGGGATGAATGAG----CACTTTGGATGCGGCCCCGGGTTGGGC------GG-GGGCGGGGAGC---GGAGCCCCAGTTGTGGCTGGTGCTTGCCCA-GCAGTCGGAAGGTTCACGGT--GG-TGTCCT------------------GGGGTTCC-CGGCTCGGACC--CGCCTCAGGGAGCGCCCACCTGGAGCTGTTTGTCTGATGAGGTGA-TACCTGGCACCGTGGGAAG-AGGCCCGGGC-AGCAGGGCGGA--GGAACGCTCGTAAAAGGGTTTCGTAAGCAGCCCTGG-----------CCGAG-GAATATTCCAGACACACAAATGCA-----TT-TATTATGCAGTCTCCACTGG--TGGAGAAGAAATT-----CAGAATTGGGA-ACTTC---ATGAGTTTAAGACAACACAGGAGGGAGACTGAGGCAGC-GTG-AGGGAATGTTCCAG-----CCACGGGC----CTGCCTCCCAGC------------------TGCCTCTGCCCCAGGGTG------------GACTGGAAACAG-----CCGCCACGGGGG--CTCCCCAACCCGGCCCCACCCTGCCTTTC---------------CGCCCCCCAGGCCTCGCTTGAGTCCACCTCTTGCAGGAAGGCCTCCTAGGGCCAC----------------GAGGGAGCTGCCCCGGCCTCCCTGCGGGGTTCGAGGCTGGGCTCACCCTG----TCCCTGTCTCTCCCTTGGACTCAGAGCAAGGCTGAAGAGGACGCGGAGTCTGGGGAGGACGCTGGGGCCAGCAGACGCAACAGCCGCCTCGTCATGGGAAGCTTCTCCAGGCGCAAGGTCCTGCGCAGCTCCCAGCCCAGGGTCCCCGTCTGGGCTCAGCGTCCTC----------CATGC-TCCCAGTGCCCCAGCGACCC-CTGCCCCAGCCA------------------------------------------------------GAGCAGA----TGGGGGTCTCCTACAGCCCCCAGGAT---------------------TCCCTCTGAGTCTTGGGCTGAGCGGTC-GGCTGCAGGTGCC--AGTGGCTGGGCCAGGAGCCTGGGCTGGGAGCTGGTGGGAGC---------AGGGGTCTTGCTGGC------TCATT--CCCTC-CTCTGGCCCTCACTGGCCCTCACCCCAAGCTCAGGTGAC-------------CTGTGGCCGCCCT-------     
 6 Tupaia_chinensis-NW_006198262.1-199105_199852          92.0%  51.9%    ---------------------------------------------------------------------------------------------GGCAA-GGGCCAGGAGG---GGCGCCCTGGATGTACTCATTTTATTCACAGCAGGTAGGAAGGCTTGTCTTGCTG-CTTCCT------------------GGGGTTTGCTGG--CATGAAG-GCCTTTGGGGAGTGTGGACCTGGTATTGTTTGTCTAATTAGACAA-TACCTTTGCACTGCAAGAAGAGTGCAGGACATCAGAGCTGCA--GGCATCCTCATAGAAGGGTTACATAAGCAGGCGCAG-----------CTGAG-GAATATTCCAGACACACAAACTGC-----GTTTATTGTGTAGTCACCATCTGT-GGGAAAAAAAATT-----CAGAACTGGGA-ACTTA---ATGAGTTTAAAACAACACATCATGAGAAGCTGATACGGGTGTGTGAGCGAACCTCCTGC-TTTTCAGGCC----TCTCCTGCCATGTGCCT-CCAAGGCAGAACTGGGGCAGCA------GC------------CAGTCGGTGGGG-----CTCAGCACCGGC--CCCGACTCCCTGGC------CTGGCCCTCCCCATCTTCTCTGCCTTCCTCTTGGAACTGGCTTAATTTCGCCTCTTCTAGGAAGGCCTCCTGGGGCCACTAGGGGGTGGGGGTGGGGGTGGGGTGTCCCGCCCTCACTGCCTGATTTGAGGCTGGGCTCATCCTGTCACTCTCTGTCTCTCCCTTGGCATCAGAGCAAGACGGAGGAGGACGTGGAGTCTGGGGAGGACGCGGGAGCCAGCAGACGGAACAGCCGCCTCCTAATGAGCAGCTTCTCCAAGCGCAAGGTCCAGCAGGGCTCCTGGCCTAGGGGGCCCTATCTGGGAGGGCCCAGTC----------TGAGC-CCACCGTCCTCCTAGCCCTC-TGTGCACCAGCCAGGG--G-AGGGTTTCTG-TAGGCCCT-------CGGAGCCCCTGCCT--------------------GGCTCCCAGACTCTTCCCTTGAGTCTTAGGCTATGTCGTCTGGCTACAGGTGGAGCTGTGT----------------CTGGGGTC--AGGGTCTCAGGGTCGAGGCTTGTCT-----------GGAAC---------AGGTGCCTGATGGTGCTCTGGCCCCT--GCCCTGTGCTGGCCCAAGCTGGCCAGGATCCTGGA----------------------------GCTG-----------     
 7 Carlito_syrichta-NW_007256000.1-151811_152353          90.7%  44.2%    ------------------------------------------GGGGCGGGATGGCCCAG----GAGC-----TGCCTGAACCGGCC-------TGGGG-GGGCGGGGGCG---GGGAGCCCAGGTGTGCCTGT----TCTCGTGGTGCTGGGAAGGCTCCCTG-------------------------------GGCTCCC-CCT--CAGAGT----CCACAGGGGCCGCAGCTCTGG--GTG-GGTGCTGGCTAGGCGA-CACCTGAGCTG--CC------AGACACGGGCAGGACACGAGC--TGCATAGCCTCGCAAGC------GTTGCATAAGCAG-----------CCGAG-GAGCGTTCCAGATACACAAATGCA-----TGTTATGTAGC---CGCCATCTG-------CGGGGAGA-----AAGAACTGGGA-ACTTA---ATGAGTTTAAAACATCAAGAGAAGCTGTGTGGGGGGAGTGAGGGTTTT--------------CACGGGCC----TGGCTTTCCAGATCCCT-CCTCCTGGCAACTGCCTCCATGCCCTGGGCAGACCCAAGCAGCAGGCGGGGGAGGCGGGTAGGGAAGGGGTGATCAAGCTCTGGCCCATCTCCCCCGCCAGCCTTCCCCTCCCCATCTTCCTCCCGGGCCTGGCTCAAGTCCACCTCTTCCAGGAAGACCTCCTGGGGCCACTGGGGAAGCTGTCC---------CGGCCTCCCAGTTTCTGCCTGTCCTAAGCCTGGACTCACCCTGTCTCC---CGTTCTCTCCACTGGGTCAGACCAAGGCCGAGGACGACGTGGAGTCTGTTGAGGACGCCGGGGCCAGCAGACGCAACAGCCGGCTTCTCAAGGGCAGCTTGTCCAGGCGCAAGGTCCAGTGGGGTACCTGACTGGGGGCCGATCTGAGCCCGCTGTCCCCCCGTCCCAGCCAGAGAG-GAGGGGTCT-CCTGCAGCCC-CGGGCCCTGGCTCAGGGTG-CAGGGTCCC------CTTTGAGGCCTTGGCTGTGCTGCTGGCTGGGGCTGGTA----GGGAGCCGGTGTCCCTGGGCCACTGGTCACCGCCCACCGTGG----CCCACGCTGACCAATACCCCAAGCT---------CAGG--------------TGCCCTGAGGCTGCCCTAAGAGTCCACTGGGCC---------CAGACCCAGAGGGCA----CCTCAGA--GGCCTTGGCAGGCCCGG-------------------------------------------------------------     
 8 Galeopterus_variegatus-NW_007727608.1-251993_252501    94.1%  50.1%    ---------------------------------------------------------------------------------------GGGGGGGGTGA-GTGCTGCCAGG--AACAGACCTGGGGGGCCCTGG--GGGTAGAGGAAGGGAGCCTGGCTGGTCCCGCAG-CTCCCC------------------GGGATCCCACGGCACAGAGCC-CGCTGTGGGGAGCGCAGACCTGGTGTTACCCCTCTAACCAGGCAA-CACCTTTGCGCGGGAGAAG--CAAGCAGGACGTCAGAGCTGC--AGGACCCTCGCAGAAGGGTTACATAAGCAGGCCTGG-----------CTGTG-GAACATTCCAGACACACACGCTGC-----ATTTATTATGTAGTCACCATCTGT-GG---GAAAAATT-----CAGAACTGGGA-ACTTA---ATGAGTCTGAAACATCGCAGCACGAAAACAGCGCTGGCCTGAGAACATTTCCACTGG---G-CTCGTGCC----CTGCTTTTCAGGCCACT-CCTCTGGGCAGCTGCCTCTGTGCCCTCGGG------------CAGACGGGGGCA-----GACGGGGGCAGA--CGGGGGCAGGGGGTCAAGCCCTGGCCCCCTGCACCCTCCCTGCCTTCCTCCCAGGCCCGGCTGGATCCCGCCTCTTCCAGGAAGGCCTCCCGGGCCCG-------------------------CAGGGGAGCTGTCCTGCCCGGTTTGAGGCTGGGCTCACCGTGTCACCCTCTGTGTCTTTCTGGGGGTCAGGGCAAGGCTGAGGAGGACGTGCAGTCTGGGGAGGATGTCGGAGCCAGCAGACGGAGCGGCCGCCTCCTCGCAAGCGGCTTGTCCAAGCGCAAGGTGGAGCAGGGGGACTGGTGGGGAGGCGGGCGGGGTCTCCTCCGGCCCAGGGCCCCTGGCCTGC-TACGTGTGCCGGGG---CTG-GGAGCCCAGAGACAGGCTG-GTAGGAGCCA-GTGCTTTGCTGGCCCTGTGGGCACTGCCTCCTCTGGCCC-------------------ACACTGGCCAATGTCCCAAGCTCAGGTACTCTGTGGCTGCCCTGGGCACAGGCCAAACTGGG-CACTGCAGAGG--------CCTAGGCAGACCTCGTGGGCA-------GGATAGACC---------CGGAGGCCCCCAGAA-------CCCA--GGAG--GAATGGCCCCCTCC-------------------GAGAAC-------------CCGTCC--------------     
 9 Marmota_monax-NW_025724459.1-184768_185021             86.8%  32.1%    ---------------------------------------------------GGGGCACGGAATGGACTGGTGGGAGTGGGAGGTGGGGGCTGCAGCAGCCTCGGGGGCAG--ATGCACAGCT--CGGGCTTCCGGCGGCGC---CAGCGTGGATGGGCTCAGGGACGG-CTGCGTGGACCT------------GGGGGCCGGGGCCAGTGCTC--CCAG----GCCTGAGCTCCAGGGTCCC-----GGGGGGAAGGCCC-GTCCTGTGCTC-CTGGGAT-TCGTGG-------------------GCATGGACTCTGGCTTTGGGGAGTGGGGCCTGGCG-----A------TGCT----TGTCTAGCCTGGCA--CTGCC------AGAGGTGGGTCAGGACAGTGGG--C-TGCAGGGACCT-----CGAGGAAGGCCTGCGCA--GGCGGTCACGGCTGGACCTTCCACTCAAACTGCTTGTCGCAT-----CGTCGCCCTCT-----GCTGGACA----CAGGTTCAGAGCCCG----GAGCTCGCGCTTGCTTCAGACCACACACT--------GTTGTGACCTGGCACAC-GAGTGCAGGCAGCCCTGGG--CCTGGGG--------------TCCTGTTCTCCAGCCCCTAGCCTCCCTAAGGCGGGCTCAGCTCTGCCTCTTCCAGGCAGGCTTCCAG-------G----------------GCTGCAGGGACCTGCCCGGCAGGTGTCGTCC--TGGTTTGAGGCCAGGCTCACCCTCTGTCTCTCCCTTGGGGTCAGAGCAAGGCCGAGGAGGACATGGAGTCTGGGGAGGACGCCGGGGCCAGCAGACGGAACCACCGCCTCCTCATGAGCAGCTTCTCCAAGCGCAAGGTCCAGCGAGGCTCCTGGGCT--------------------GGGGTCCCTGTCCGAGCCCACTGTCCTGCCTGCACCAGGTGCTGGCTGTGGCTGGCCTCAGGAGCCCAGGGGCAGGGGCTGGTC-------TGGGGCAGGTGCCTTGGCCCTTGGG------TCAC--TGCACTCCTCTGGCCCCACTGACTGCTG----TCCTGAGAGCC-----CGCTGGAG------------------CTGGGCGGCCTGGGCACTGCAGACCCTGGGAGAGGCCTGGCAGGCTGGGGCTGCCGGGAGCCCAGGG----CAGGCCCTCCACGCACCCTCCAGCCTTTGCCCATGG-----CCTGGCCTGACCTAGGGCTCC---------------------------------     
10 Camelus_dromedarius-NC_044523.1-199765_200241          88.9%  39.4%    ------------------------------------------------------------------------------CAGGGGCAGGG----------GCGTCAGGAGG---GGAGCCCCTGATGCGCGAGTTCTCTAAACGGCAGCGAGGAAGGCTCAGCCCTGAGACTTCAGGAGATCTGCCGCAGCCCTGAGTGTGGACAGCAAGCGGCC-------------GCCACTCTGTGGGGAGCAGAGCC---AAGTTACTTGTCTAATTAGGTGAAGAAGCAGGCCAGGACTCCGGGGCTGC--AGGGCCCTTGTGTGAGGGTTATATAAGCAGGCAAGC-----------TGAGG-A-ATGTTCCAGATGCACAGACAAC-----ATTCATTATGCAGTCACCATGCACGGGA--AAAATAGT-----CAGAACTGGGA-ACTTA---ATGAGTTTAAAACAACACATCGCGGGGAGCTGATGCGGGCACGTGAGCGAGCGTTTCCACTGGTCCTCGCC---TTGGCTCTCAGGCCCCTGCTCCCGGCAGC-TGCCTGTGCGCACCCAGG---------GTGGGCTGGAGACGG-----TGCCACCA------GGG---CCTGGGGCAG----CAGCCAGCC---CAGGGCCCGGCTCCCCCTTCCTCCCGCTCTTGGTTCTCCCTCTTCCAGGAAGGCTGCCTGGAGCT---------GC--------------TG-----GGAGGAGCTGCCTGGTCTGAGGCTGGGCTCACC-CC--------GTCCCTCTGTCTCCT-CTCCTCCCAGGCCGAGGAGGACGTGGAGTCCGGGGACGATGCTGGAACCAGCAGGCGGAACAGCCGGCTTCTCATGGGCAGCTTCTCCAAGCGCAAGGTCTGGGGGCCTCTGGGTGGGGCCCT----GCCAGAGTGCAGCATGCTTCTTGCCCCCGTGTGC-ACCAGCTGCCCCTGTGCCAGCCAGAGGTGGGGGTTTT----------CCTCCAGCCTCGAGGGCCCCTGGGATTCCTGG------------------------CTGCATCTCCTGACTGCAGGTGCTAGGTTTGGAGTCC------------------TGGTCAGGGCTGGA-AGGAGTAAGTGGC--CTCACACTGGCCAGTGCCCAGAGCTCAGGTCACCCAGTGCC---------CAGGCCA-AGCAGGGCAAGGCAGAGGACGGGGCAGGCAGGCCTGCAA--GGTGGGCGCCCGGACCCACGGACGGCAGG----------------------------     
11 Microcebus_murinus-NC_033661.1-185231_185480           87.2%  40.8%    GCCTCCTGGCACATGTGCCAGCACAGGCTCCTTGTGGGCGAGCTTGGGGGACAAACGCG----CAGTCTGTGACACGGCCCTGGGGGTCTAGGGGAG--GGCGGGGAGGG--C-------GCCCCATGCCCCTTCTGCA----CCGGGGAAGGGGGCTCGTCCTGCAG-CTCCC-------------------CAGAGTGG-CGGCTCCGAGCCCGCCTTTGAGGAACATGCACCTGGAGTTGTTTGTCTGACTAGGCAA-CATCTTGGCGCAGCCAAAAGCAGGTCAGAGCTTCAGGGATGC--TCGTGCAGGGCT--------------GCAGAGGCAG-----------CTGAG-GAACGTTCCAGACACACAGAGCGC-----GTTAACCATGTAGTCGCCATCTGGGG-----GAGAAAC-----TCAGAACTGGA-AGCTG---ATGAGTTTGCAGCAGCATGTCAGGAGAGGCCAGCGCGGGAGTGGGTGGCTGTTCCCG---------------------------------------CCGGGCTCGGCCTGTCCCCCCGCGGG-----------------------------C--------------ACCTCTGAACCCGGGTGTCCGACCA--------GGAGCCCGTCCTCCGCCCAGGCCTGGCTCCAGCCCACCTCCTCCAGGGAGGCCGCTGGGCGGCTG-----------------------GGGGAGCGTCCGCCCTCCCGGGGCTCACGCTGGCCTCACCGTC-----ACCCTGTCTCTCCCCCGGGCCAGAGCAAGGCGGAGGAGGACGCAGAGACTGGGGAGGACATCGGTGCCGGCAGGCGCAACAGCAGCCTCCTCGCGAGCAGCTTCTCCAGGCGCAAGGTCCGGTGGGGATCCCGGGCTGGGGACCTGTCTGAGCCCCGTCCGTCACCCACCTGCCAGCAGC-CCCCACCGGCCAGAGAGCAGGGGCCGCCCGTCCCCAG----GCCCTGGCCAGTCCCTAGTCTGG---AGTGGGCACCCCCACGGCCCTCCGG---------TCACCCCCTCTCCAGCCCATACTGGCCCGGTCCCC----------ACAGCTGCCCAGAGGGCCATGGCCAC-AGCCTCAGTGCACCCAGCGGAGGGGTGGACAAGGAGGCCACGCAGCCACTGGGG-A---------CCCTCCCAGCCTCCGCCCTGCCC---------TGCTCGGGCCCACGG--CTC------------------------------------------------------     
12 Castor_canadensis-NW_017871110.1-184010_184286         85.4%  31.0%    -------------------------------A------ATGTGAGGCATGGTCTCCCAG----CAGCTCTGGTGGGAGCCTC--------------GACCTGCTATATTC-AGGGTGGA-----TGTGA-AGATTTGTGAG---GTGGGGCAAGGTGCTTCTAGAGCC-AACCTGGGGTCC------------TGGGGCAGGGGACTTGGGGG--TGCCCT------------GGGTCTGC-------------CTGGGT-GTCCTGAGCCT-TGGGGAG-TGGCCCTGGAATTCTTTCTTTCATTAAGTGACGCCCCTATTCGGCAAGAAGCAGGGCAGG--ACATTAGGGCTGCAAGGATCCTCTGGAAAGGACTGC-----------ACTAACAGGCTTCGGCTTGG--C-TGGAGAACATT-----CCAGACACAAG-CCGCA---TTTATCTTGTATTCTTTGTCCTTGGGAAAGATGTTCAGAACCAGTACTG---AGTTA-----AAAGCACA----CATTGCGAGAAAGTG----GTGTTGGCATGTGAACAAACTCGATCCCA----------------GCCTCCCCA-TTTTCCAGGCCTCACCTAG--GCAGCTGCGCCC---------ACTCACCTACCCGCCCTGCCTTGCTCTCAGGCCGGCTCAACGCCACCTCTTCCTGGAAGACCTTT---------------------------GGGGGCTGTCCTGCCCTCTCTGCCTGGTCC--AAGTCTGGGCTCACCTTCTGAGCCTGTGTTTCCCTCAGGGTCAGAGCAAGGCTGAGGAGGGCGTGGAGTCCGGGGAGGAGGCTGGGGCCAGCAGTCGGAACAACCGTCTTCTTATGAGCAGCTTCTCCAAGCGCAAGGTGAGTGGAGCCCCTCAGCTGGGTGCCGT-----------------------TTATGTCCACTGTCCTTCCTGCACCAGGTGCTAGCTGTGGCTGGGGTCGGGAGCCCAGGGGCAGGGCTGCTCA-------GGAGCAAGTGCCTTGAGGGCCCTCT------GGTCACTGCCTTCCCTAGCCTCCACTGGCTGATGCCAGAGCTCAGGTACCACATGGCTGTCCCGAGAGTACACCAGGGTCAGGGTGGAGCAGGACACAGCAGAGGCCTCTGCAGGTTCAGCTGGGCAGG-----------GTGG----------------------GCCT-------------------------GGTAGGCCGTGTGGACTGCCTGAGAAC--TCAGGTAG-GTGGCC-------     
13 Rattus_norvegicus-NC_051340.1-186140_186370            88.4%  33.9%    -------------------------------------------------------------------------GAGTGGGTG-GTGATGTCATAACAGTCTGGGAGAAGCCAGTGTGCAGTACAGTTGGTCAGTGACTTTC---ATGTGGACAAGAGACCCGGATGGG-ATCCTGGC----------------------CAGGGCC--TGGGA--GGACCTGGGGTGTGTCTACCCTGTGCCCAGGGCGTAGGTAGTTCT-GTCCTGCGCTC-CTCAGAC-TCA-------GCTGGCTGTATCTGGAATTACTCACTCTATTTGTGCTACAGTAAGAGACT--------------------GGGGCATCAGGGCTTTAAAAA------AGGATTACGTAAGTAGGCTCGG--C-TGAAGAATATT-----CCAGATGCAAG-CTGCG---TTTATTATGCAGCCTCCATCCATGATAAAGAAATTTGGAACTGATTACTTGAGTTTA-----AAACCACC----CACCACGGGAGGCTG----GTGCGGGCATGTGAATAT----ATGCCAC--------TCT-GTCTCTAGTCCAG-CTCTTCAGACCTCTTCCCG--GCAACTGTGCTTGCCCCATACCCCTACCCCAAATCAGTGCCTTGTGTCCAGGCTTAGTCAAATCTACCTCCTGCAGAAAGGCCTTCTGGGGCCACC----------------AGGGAGCTGTCCTGCCTTCCTTGCCTGGTTG--------GAGGTTGGATTCAACTTCTGTCTGTCTCTCAGGCTCAGAGCAAGGCCGAGGAAGATGTGGAGTCTGGGGAGGACACCGGGGTGAGCAGGCGGAACAGCCGTCTCCTCATGAGCAGCTTCTCCAAGCGTAAGGTGAGGAGAGGTCCTGGGCTC--------------------AGGGGTCCCATGCAGTTCTGCCGTCATCCCTGTACCATTCTCTATCTGTGGTTGGGGTCAGGTT-CCCAAGGCAGGAGCTCTGG-------CTACTGCCTTCCCTTGACCCACACT------GGCCAGTGTCT--GAGATTCAGA------------------------------------CACAGGGAGTCCCGAGAGTC-ACCCAGGGCCAGGGCACCGCCAATACCTCTGTGGGCCAATTGGG-TAGGAACTCAGGAACCTGGGCAGATAGC--CCCTACCCTGCACCTCCTGGCCTTTTACATGT-----CCTAGTTTGATCTCAGGTCACAATTCCA-----------C-TT-----------     
14 Lemur_catta-NC_059130.1-185110_185330                  86.9%  40.4%    -------------------------GACTCCTTGTGCGTGAGC-TTGGGGACCAACGAG----CAGTGTGTGACACGGTCCTGGGGCTCTGGGGGAG--GGGCTGGGAGG--GTGTCCCCCCCCCGTGCCCCTTCTGTA--CCCGGGGAAGCGGGGCTCATCCAGCAG-CTCCC-------------------CGGAGTC--GCCGGCTGAGGCCGCCTTTGAGGAGCACGGAGCTGGAGTTATTTGTCTGATTAGGTAA-CACCTTGGCGCTGCCAAAAGCGGGTCAGCACATCAGCGCTTC--AGGGGTGCTCGT----GAAAGGGCCGCAGAAGTAGG-----------CTGAG-GAATGTTCCAGACACACATAATGC-----ATTTATTACGCAGTCACCATCTGTGG-----GAAAACT-----CAGAACCGGGG-ACTTA---ATGAGTGTAGAACAACACGTGGTGAGAGGCCAGCGTGGGTGTGAGTGGCTGTTCCCA---------------------------------------CCGGGCTCAGCCTGTCCCCCCAAGGG-----------------------------C--------------AGCTCTGGGCCCGGGCGCCCGACTGGGCTCCCGCCTGCCCGCCCTCCGCCCGGGCGTGGCTCCAGCCCACCTCTTCCAGGAAGGCCACTGGGCAGCTG-----------------------GGGGAGTATCCGCCCTCCCTGAGCTCACGCTGGCCTCACCCTC-----GCCCTGTCTCTCCCGCGGGTCAGAGCAAGGCGGAGGAGGACGCGGAGCCCGGGGAGGACGTCGGTGCTGGCAGGCGCAACAGCAGCCTCCTCGCGAGCAGCTTCTCCAGGCGCAAGGTGCAGCGGGGCTCCCGGCCCCACCCCCACCG-----------------------------------------GCCAGACAGCAGGGGCCTCCCGCCCCCAG----GCCCTGGCCGGCCCCTAGTCGGG---AGTGGCG-ACTCCACGGCCCTCTGG---------TCACCTCTCCTCTGGCCCACACTGGCCAGGTCCCC----------ACAGCTGCCCAGAGGACACGGC-CGC-AGCCGCAGTGTGCCCAGCAGGGGGGACGAGGA---GGCCGTGCGGCTGCTCGGGAG---------CCCTCCCCGCCTCTGCCCTGGCCTGG----CCCGCGTGGGCCCACGG--CTCACAGCTCTGCCCTCCACAGAAAAAGGGCGGCAAGCTGAA---------------     
15 Grammomys_surdaster-NW_021620991.1-185674_185895       88.1%  32.2%    ----------------------------------------------------------------AGTTGTGTGGAGTGGGTG-GTGATACCATAACAGCCCGGGAGAAACCAGTGTGCAGTACAGTTGCTCAGTGACTTTC---ATGAGAACAAGGGTCCAGGGTGGG-GTTCTAGC----------------------TAGGGCC--TGGGA--AGACCTGGGATGTGCCTATTCTGTGCCCAGTGCATAGGTAGTCCT-GCCCTGTGCTT-CTCAGAC-CCA-------GCTGGCTGGATCTGGGATTATTCACTTTATTTGTGCTGCAGTAACAGGCT--------------------GGGGCATCAGGGCTTCAAAAA------AGGATTACGTAAGTGGACTTGT--C-TGAAGAACATT-----CCAGATGTAAG-CTGCG---TTTATTATGCAGTCTCCATCCATGATAAAGAAATTTGGAACTGATTACTTGGGTTTA-----AAACCGCA----CACCATGGGAGGCTG----GTGTGGGCATGTGAATATATGCCGCTCT--------------------GCCCAG-CTCTTCAGGCCGCTTCCTG--GCAGCTGTGCTTGAC--CTCCCCCAGCCCCAAATCAGCGCCTTGCTTCCAGGCCTGGTCAACTCTACCTCCTCCAGAAAGGCCTTCTGGGGCCACC----------------AGGGAGCTGTCCTGTCTTGCTTGCATGGTTG--------GAGGTTGGGTTCAACTTCTATCTGTCTCTCAGGGTCAGAGCAAGGTTGAGGAAGACGTGGAGTCCGGGGAGGACACTGGGTCGAGCAGGCGGAACAGCCGTCTCCTCATGAGCAGTTTCTCCAAGCGCAAGGTGAGTAGAGGTCCTGGCCTC--------------------AGGGGTCCCATGTAGTTCTGCCATCATCCCTGTACCATTTGCTAGCTGTGGTTGGGGCCAGGTT-CCCAAAGTAGGAGTTCTGG-------CTACTACCTTCCCTTGACCCACACT------GGCCACAGTGTCTGAGATTCAGA------------------------------------CACTGAAAGTCCTGAGAGTCCCCCCTGAGCCAGGGCATTTCAGATACCTCTGTGGGCCAATTGGG-TAAGGATTCAGGAACCTGGGCAAATAGC--CCTTACGCTGTTCCTCCCGGCCTTTTACATGT-----CCTGGTTTGATCTGAGGTCCACAAAAA---------------------------     
16 Chinchilla_lanigera-NW_004955486.1-185359_185528       84.8%  31.3%    -----CTGGG----------------------------CCAAGTTTGGGGGCACTTGTGAGG-GGGCTGGCGGGGAGCAGGTGGAGTGGCGGCAGCAGCTTCAGGGAAGCAAGCGCTCTGCATAGGAT------------C---CTGTGGCCCAGGGTGGCCGA-----ACTCTAGGGTGG------------CTGGGCGGTGGATGGTGGGA--GGAGGGGCACAGGGCCT----GGGGACCAGGAGGCGGGGAGAGCT-GTGTGGTCCCA-GAGGGCT-GAGTCCC--AGCTCCATGCTG---AGGGTGCAGAAGACTCATCTCCTGCCCCTGGTGTCG--GGGTCACAGCTGACACTGTGTCCAGGACCCGGTGCTACTGGGGTGTGGGTAACCCCTCTGCTCTGGG--C-GGCGGGGTCCT-----GAGAAAGCAGGCCGGCT---------------------AGGGGTGTCCCGGACTCTGGCAGCGTTCAGGTGCAGTCT-----G--------------TC----------------CCAGGACAGCGAGTCA---------------------------GCGGGATGG-GATTAGAGCCAGGCCACGGAGAAGCCTGTGCTGCCC----ACCCGGCCCCGGCCTCCAGGACTCG--CCCTGGCTTTGTGCCCG----CTCGCCCCGCCCTCCCTAGCT-GGGCTCA----------------AGCCCACTC---TTCAAGGAAGCCTCGAGGC--TGCGGGGGGCACCAGTCTCATCCTTACCTGTCTCCCTTGGGCAGAGCAAAGCTGAGGAGGACGTGGAGCCTGGGGAGGACGCCGGGGCCAGCAGACGCAACAGCCGCCTCCTCATGAGTAGCTTCTCCAAGCGCAAGGTCCGGCCCCGGTCCCAGACTGGGGGCCCTGTG--------TGGGGACCCCGCAGAGCCCACCCTACTCCCCAAACCAGGTGCTAGCGGGCTCTGGGGTCAGATGCCTCGGCGGC-CCCCTCTGG-------CCTGGCCGGTGCCTGAGCTCAGACA------CCCTAT-------GGCTGCCCCAAGTTGCCAGGGCCTGGGCAGAG--CC-AAGCGGCTGGGCAGGAAGGGT---------TTGCAGGCTGTGTGGGCTGCTGGGAACCCAGAGGGCCCAGCTGAATGAGGGCC-----------------------------CCGCAGGTCATAGCTCTGTCCT---------CCGGCACAGAGAAAGGGCAACAAGCTA-----------A-AG-----------     
17 Onychomys_torridus-NC_050444.1-186267_186489           81.3%  30.2%    -----CTAGA----------------ACTCTT------CTGAGTTTCCAGGTACCCATGCAA-GAGTTGTGGGGAGTGAGTGTTGATAGCTATGGTGGCCTTGAAGAAGCAAGTGTATAAGTAAGTTGCTCAATGGTTCTG---ATGTGAACAAG-CTTCCAAGATGG-GGTCCTAGGCCC------------CAAGGCCAGGACCTTGGAGG--ACCACTGGGGTGTGCCTACCCTGTGCCCAGTGGGTAGGTAGTCTT-ACCCTGTACTT-CCCAGCC-TCA-------CTTAGCTGGATCTGGGATTATTCACCTAATTTGTGCAGAAATAGGCTGGG--GCGTCAGGGCTTCAGGGATTTTCAAAAAAGGATTATGT-----------------AAGCAGACTCAG--C-GAAAGAATATT-----CCAGATGCAAG-CTGCA---CTTATTATGCAGTCTTTATCCATGATTAAAAAAATTTGGAACTGGTACTTGA--------------------------------------------------------------------------------G-TTTAAAACCACAC-ATCTTCAGGCATCTTCCTG--GTAGCTGTGCTT---------GGTTCCCCCAAATCAGTGCCTTGCTCCTAGACCTGGTCAATTCGACTTCCTCCAGAAAAGCCCTCTGGGGCCACC----------------AGGAAGCTGTCCTGCCCTCCTTGGCTGGTCA--------GAGATTGAGTTCAACTTCTGTCTGCCTCTCAGGGTCAGAGCAAGGTGGAGGAGGATGTGGAGTCCGGGGAGGACACCGGGGCAAGCAGGCGGAACAGCCGTCTCCTCATGAGCAGCTTCTCCAAGCGCAAGGTGAACAGAGGTCCTGGGCAA--------------------GGAGGTCCTATCTGGTGCTACTTTCATCCCTGTACCATTTGCTAGCTGTGATT-GGTTCAGGGTCCCAAGGTCAGGAGCTCTGG-------CTACTGCTCTCCCTTGACCCACGCT------GGCCAGTGTCTGATATTCAGATA------------------------------------TCCCCAGGG--------------------CCAGGAGCCTGCAGATATCTCTGTGGGCGCAATTGGGTAGGAACTCGGGAACCTGGGCAGATAGC--CTCTGGCTTGCACGTCCTGTCCTTTTTCATGT-----CCTGGCTTGACCCATGGCTTCTCAAGTCAC--AATTCTAC-CTCCCTGC-----     
18 Equus_asinus-NC_052181.1-198919_199468                 88.8%  41.4%    -----------------------------------AGAATCAGG----------------------------------CCTGGGGGGGC----------CCTTGAGCAGG---GGAGCCCCAGATGTGCGTCTTCTATAAATGGCTGCGAGGGAGGCTCAGCCCTGTGGCTTCGGGGGACCCCGGGGCT----------GGACAGCAAACAGCC-------------GGCAGCTCTGGTGGTACTCGTCTAATTAGCCAGTCCCTTTGCTGCTGCAAGAAGCAGGCCAGGACACCAGAGCTGC--AGGGCTCCTCGTAAAGGATTACAT---AAGCATGGC-----------TGAGG-A-ATGTTCCAGGTAGACAAACAGC-----ATTTATAATGCAGTCACTGTCCCTGGGAAAAAACCCCT-----CAGAACTGGGA-ACTTA---ATGAGTTTAAAACAACACAGCCTGAGGAGGTGAGATGGGTGGGCGAGCGAACATTTCCGTCAGTGCCGCTGGCCGCTGGTCTCCGGCCTCTGCTCCAGGGCTGCGGCCTCT--GTGCTCCAG---------GTGGGCTGGAGACTG-----TGCCTCCC------ACCACACCTGGGGCAG----CAGCCGGCCTGGCCTGGCTCCCCGCCTCCTCCAGGCCCCGCTCAGTTCTCCCTCTTCCAGGAAGGCCTGGTA---------------------------------------TCCCCCTGCCTGGTTCGAGGCTGGGCTTACCCTG--------TCCCTTCTGTCTGTC-CTTCCTCCAGGCTGAGGAGGACTTGGAGTCTGGAGAGGACGCCGGAACCAGCAGACGCAACAGCCGGCTCCTCATGAGCAGCTTCTCCAAGCGCAAGGTCCAGTGGGGCCCCTGGTGGGAGGGCCCTGCCTGAGCCCACCGTGCTCCT--GCCACATGTGC-CCCAGCTGTCCCTGTGCCAGCCAGGGTGAGGCGTCTC----------CTT-GAGCCCCCAGGGCCCCTGGCCAGTCTCCCAGAACCCCCTGTCGAGTTCCTGGCTGCATCATCCTGCTGCAGGTGCTCGGGTCCGG----------------------------------GG-CCCTGGTCAACGG--CCCACACTGGCCAATGCCCTGAGCTCAGGTCCCCTGGGGCC---------AGG-CCG-AGCAGGGCCCTACAAAGGATGGGGCATCCCTGGCCGGGCAGTGTGGACGCCAGGAACCCAGA------------------------------------     
19 Hipposideros_armiger-NW_017731634.1-184375_184865      86.1%  38.0%    ------------------------------------------------------------------------------GGTGGCCCCTC----------GGGCAGGGAGG---ACAGCCCTGGCCATGCACGTTCTATA------CACGTGGAAGGCTCAGTCCTGTGTGGTCAGGGATTCACCACAG--CGTGAGAGGGAACCGGAAACAGCCCGCCGCTGTGGGGAGCGCAGCCCCTGTTATCTGTCTAATTAGGGAAAACCTTTGCTGCTGCAAGAAACAGGCCAGCACATCAGAGCTGC--AGGGTTCTCATAAAAGGGTTACATAAACAGGCTCGG-----------CTGGG-GAATATTCCAGACAC------AGA-----AGGCATTGATTAGTAGTCGCCATCAGTGGGAAAAAACC-----CAGAACTGGGA-ACCTA---ATGAGTTTAAAGCAACACATGTCAAGTTGCTGATGCAGGTGAGGGGCCATCCACCAGGG------CCCTCCCTTGTTCTTCTCGGGCCTCTGCTAC-------------CTCCGTGCCCCGG---------GTGGGCTGGGGACGG-----TGCCTCCC------TCCCACGAGG----------------------CCTGGGGCAGCCAGCCCACCCGGCCCCGCTCAGGTTTCTCTCTTCCAGGAAGGCCACCTGGGCTACCTGGAGGAGC--------------TGCCTGCCCCCACCCCACCCAGTGTGATGCTGGGCTCACCCTG--------TCCCCTCTGTCTGTCCCTCCTCCTAGGCTGAGGAGGACAAGGAGTCCAGGGAGGACGCCGGGGCCAGCAGACGGAACAACAGGGTCCTCGTGGGCAGCTTCTCCAAGCGCAAGGTCCTGCCTGCCCCCACCTGCCCCTCTGTC---------------------------------------------CCTGTGCCAGCCAGAGTGGGGGTCTCC----------TCCAGCCCCCAG------------------------AACCCCCTTCGAGTTCCTGGCTGCATCGTCCGGCTGCAGGTGCTGGGGTCCGGAGCCCTGATCGGGGCTGGATGGAGCAGGTGCCTCAG-TGGCCCTCCCTGA--CCCACACTGGCCAGTGCCCTGAGCTCAGGTCACCTGGGGCC---------CGG-CTG-AACAGGGCCCTGCAGAGGACGGGGCAGGCCCGGCCAGGCAGCGTGGGCGCCAAGATCCCCGGACCGCAGCCCCGCCTCCCGCACCCGCCCAGCCTCTG     
20 Otolemur_garnettii-NW_003852462.1-184568_184839        90.4%  39.0%    ----------------------------------------------TGGGGCAACTGAG----CAGTTTGCAACTCTGCCTGGGGGGTCGGGGGGCGATGAGAGGTGCTA--CTAGGCCCCCCCTACTCCTGTTTTGTGTACAGCCTGAAGGAAGTTTGGCCCTGTGG-CTTCTT------------------GGGTGTCACTGGCTCCTGGCC-TGCCTTTGAGGAAAGTGCACCTGGGCCATTTGTCTGATTAGGGTAACACCTGTGTA----------------------------------------CTGGAAGAAGGGGGTGGGAGCTCCTACAAG-----------GACTG-CAGAAATAGGCTGAGGAATGTTCT-----GTCTACTACATAGTCACCATCTGT-GGGAAACAAAATT-----CAGAACTGGGA-ACTTA---ATGAGTTTAAAGTGGTTTGTCATGAGAGGCTGGCTGATGGTGGGCTTGTGAGTGGACGCTTTGTTGGGCA----CAGATTTCTAGTCCTCT-CCTTCCGGTGGGCACCTCTGGGCCCTGGGG------------CAGAGGGAGCAG--------------------CAGCCTACTGGCTTGAGACCTG--GTTCCCTGCCTTCCTTGCCATCCTCCCAGGCCAGGCTCCATCCCACCAATTCCAGGAAGGCCGTCAGGGCTGCTG------------------TGGGGGCTATC--CCACCCCCTGCCCTCTTGGGCTGGGCTCACCCCATCTCT---CTGTCTCTCCCTTGGGTCAGAGCAAGGCAGAGGGTGATACGGAGTCTGGAGAAGACACCGGGGCCAATAGACGAAACAGCAGCCTCCTCGTGAGCAGCTTCTCCAAGCGCAAGGTCCAGTGGGCTCCTGGGCTAGGGCCTGTCTGAGCCCCTGTTCCCTCCCCAGATTCCCCCAGCC-CTGGTCTGACTCCTGGGATCCAGCCTTGAGGCTGGGGCTG-GTCAGCACTGGATGCCTCAATGGCCCTAGGATCACTGCCCTT------------------CACTAGTCCACTCTGGCCAATGCCGCAAGCTCAAATTCCCCATGGTTCCCTTGAGAGTTCACTGGGCCCTG------GGTA---------------ATGTGGAGGATGGACTGAGAGGCCA------------------------TGTGGGCCCCTGGGAACC--CAGGAGGACAGGGCCCCTCCCCATACCCTTCCAGCCT-----------------------------------------     
21 Dipodomys_ordii-NW_012267222.1-184499_184708           89.6%  36.4%    ----------------------------------------------------------------------------------------------------TGTTCAGTCC--TGCTGTCCTGACCCTGTTCAGTCCTGCTG---TCCTGACCCCGTCCTGCTGTCCT--GACCCT------------------GGTCTGTCCTCCTGTCCTGACCCC-GTCCTCCTGTCCTGACCCCGTCCTGCTGTCCTGACCCTGTCC--TCCTGTCCC------GACCCCGTCCTGCTGTCCTGACCCT---CATCCTCCT---------GTCCTGACCCCGTCCTGCTGTCCTGACCCTCGTC-CTCCTGTCCTGACCCTGTCCTGCT---GTCCTGACCCTGGTCTGTCCTCCTGTCCTGACCCCGTCCTCCTGTCCTGACCCTGCTCAGTCCTGCTGTCCTGACCCTGGTCTGTCCTGCTGACCTGACCCTGCTCAGTCCTGCTGTCCTGA-----CCCCGTCCTGCTGT-CCTGACCCCGTC------CTGCTGTCCTGACCCTGGTCTGTCCTG-----CTGTCCTGACTCTGGTCCT------CCTGTCCAGTCACCAGCCCCACTGTCC---------TGATCCCAGCCCACTTCCCACCTTGCTCTCTGGCTGGCTCAGGTCATTCTCTTCCAGGAAGGCCTTCTGGGGCCACC----------------AGGGAGCTGCCCTATCCCGGCTGGCTGGTTTGAGTCTGG------GCTTACACTGTACCCATGTCTCCTAGGGGCAGAGCAGGGCTGAGGAGGACGTGGAGTCTGGGGAAGACACCAGCACCGGCAGGCGGAACAACCGCCTTCTCATGAGCAGCTTCTCCAAGCGCAAGGTGAGCGGAGCTCTGAACCAGATCCCGCGCATGAGGTCCCCACCCAC-CCCAGGACGGGGTCCTGCGCATGGGGTC-CTCACCCACCCCAGGACGGGGTCCTGCG-----CATGGGGTCCTTTGTTCACC--CCAGGAC-----GGGGTCCCGCCCA--------TGGGTTCCTCCACCCACCCCAGGTGC----AAGCTGTTGCTGGACCAGGGCTGGTCAGGAGC---CACTGTC------TGGGTGGC-----CCTCTGGTCACGTCTCTCCATAGCCTACAGCTATGGAGC--------CA----------GAGCCATGGCCAGGTGGAGCAGGACACGCAGATCA---------------GAACGGGGGTG---------------------------------     
22 Arvicola_amphibius-NC_052052.2-186738_187011           83.3%  30.2%    -----------------------------------------AGTTCCCAGGTGTCCATGCAAGAGTTGTGGGGGAGTGAGTGAGGATAGCCATAGCGATCTTAGAGAAGCATGCATACAGTACAGTTGTTTG------------ATGTGAACAAGCCTTCAGGACTAT-GGTCCTGGGCCC------------CAAGGGCAGGGCCTGGGAGG--ACCACT--------------------------------GTGCCCA-CCC-TGTACTT-TCCAGCC-TCA-------CATAGCTGGATCTTGGATTATTCACCTAAGTTGTGTAGAAATCGGCTGGG--GCGTTGGGGCTTCAAGGGTTTTCAGAAAAGGATTATG-----------------TATGCAGAGGCCG--C-TGAAGACTATT-----CCAGATGTGAGCTGCAC---CTTATTATGCAGCCTCCATCCGTGATAAAGGAATTTGGAGCTGGTTACTTGGTTTAA-----ACTATACA----TCATTGAAGCTGGT-------GTGGGCAGATGAGTCAA---TGCTGCT--------TCT-GACCCAAGTCCAG-TCCTTCAGGCATCTTCCTG--GTAGCTGTGTTT---------GGCTCTCCCAAATCATTGCCTTGCTCCCAGACCTGGTCAACTCTGCTCTCTCCAGAAAGGCCTTCTGGGGCCACC----------------CGGGAGCCATCCTGCCCTCCCTGGCTGGTCA--------GAGATTGGGTTCAACTCCTGTCTGCCTCTCAGGGTCAGAGTAAGGTCGAGGAGGATGTGGAGTCAGGGGAAGACACCGGGGCAAGCAGGAGGAACAGCCGTCTCCTCATGAGCAGCTTCTCCAGGCGCAAGGTGAGCAGAGATCCTGGGCTG--------------------GGGTGTCCCATCTGGGGCTACTTTCATCCCTGTACCATTTGCTTGCTGTGGTTGGGGTCAGTGTCCCAAGGTCAGGAGCTCTGA-------CTACTGCCCTCCCTTGGCCCACGCT------GGCCAGTGTCTGGGATTCAGATA------------------------------------TCCCATGACTGTCTGAGAGTCCCCCGGGGCCAGGGCACTGCAGATACCTCTGTGGGTACAATGGGGTAGGAGCTCAGAAACCTGGGGGCGAATAGCCCCTGCCCTGCACGT----------------------TCTGGCTTGACGCATGGCTTCTCAAGTCCC--GATTCTAC-CT-----------     
23 Cricetulus_griseus-NW_003616165.1-61027_61249          88.5%  34.3%    -------------------------------------------------------------------TGTGGGGAGTGAATGGCCATAGCCATAGTGGTCTCAGAAAAGCAAGTGTGCAGCACACTTGCTCCATGGCTCTG---ATGTGAACAAG-CTCCCAGGGTGG-GATCCTGGGCCC------------CAAGGCCAGGGCCTGGGAGG--ACCACTGAAGTGTACCTACCCTGTGCCCAGTGGGGAGGTAGTCCT-GCC-GTGTACT-CCCAGCC-TCG-------CTTAGCTGGGTCTGGGATTATTCACCTAATTTGTACAGAAATAGGCTGGG--GCGTCAAGGATTCAGGGATTTTCAAAAAACAACAACAAA------AGGATTATATAAGCAGACTCCA--C-TGAAGAATATT-------------CCAGCTGCA---CTTATTATTCAGTCTCCATCCGTGATAAAGGAGTTTGGAACTGGTTACTTGAGTTTA-----AAACCACA----CATGGGGCGCTGGC-------GGAGGCATGTGAGTGAA---CGCTGCT--------TCT-GACCCGAGTCCAG-CTCTTCAGGCGTCTTCCTG--GGAGCTGTGCTT--------------------------GCCTGGCTCCCAGATCTGGTCAATTCTACTTCCTCCAGAAGGGCCTCCTGGGGCCACC----------------AGGGAGCTGTTCTGCCCTCCCTGACTGGTCA--------GAGATTGGGTTCAACTCCTGTCTGCCTCTCAGGGTCAAAGCAAGGTGGAGGAGGATGTGGAGTCTGGGGAGGACGCCAGTGCAAGCAGGCGGAACAGCCGTCTCATCATGAGCAGCTTCTCCAAGCGCAAGGTGAACAGAGGTCCTGGGCTGCATTGGGGGCGGCAGGGGGGTGGTATCCCATCAGGTGCTACTTTCATCCTTGTATCATTTGCTAGCTATGGTTGGGTTCAGGGTCCCAAGATCAGGAGCTCTGG-------CTATTGCCCTCCCTTGGCCCACACT------GGCCACTGTCTGAGATTCAGATA------------------------------------GCCCATGGCTGTCTAAGAGTCCCCCAGGGCCAGGGCACTGCAGATACCTCTGTGGGCCCCACTGGGTAGGAACTCAGGAACCTTGGGCAGATAGCCTC-CACCCTGCACGT----------------------CCTGTCCTTTTTCATGCCCTG---------------------------------     
24 Mus_caroli-NC_034573.1-185383_185596                   88.4%  32.5%    ------------------------------------------------------------------------GGAGTGGGTA-GTGATACCATAATGGTCTGAGAGAAGCCAGTGTGCAGTACAGTTGCTCAGTGACTTTC---ATGTGAACAAGCAGAC-----TGG-GTCCTGGC----------------------TAGGGCC--TGGGA--GGATGTGGGGTGTGCCTATCCTGTGCCTAGTGCATAGGCAGTCCT-GCCCTGTGCTC-CTCAGAC-CAGTCA----GCTGGCTGTATCCGGGATTA--TTCACTATTTGTGCTGCAGTAACAGGCT--------------------GGGGCATCAGGGCTTCAAAAA------AGGATTACATAAGTAGACTCGG--C-TGGAGAATATT-----CCAGATGCAAG-CTGCA---TTTATTATGCAGTCTCTATCCACGATAAAGAAATTTGGAACTGATTACTCGAGTTTA-----AAACCACA----CACCATGGGAGGCTG----GTGCGGGCACGTGAATGAATATATGTCGC--------TCT-GTCTTGGGCCCAA-CTCTTCAGGCCTCTTCCTG--GCAGCTGTGCCTGACC-CTCCCCCTACCCCAAATCAGCACCTAACTTCCAGGCCTGGTCAAACCTGCCTCCTTCAGAAAGGTTTTCTGGGGCCACC----------------AGGGAGCTATCCTGCCTTCCTTAGGTGGTTA--------GAGGTTGGGTTCAACTTCTATCTGTCTCTCAGGGTCAGAGCAAGGTTGAGGAAGACGTGGAGTCCGGGGAAGACAGTGGGGTGAGCAGGCGGAATAGCCGCCTCCTCATGAGCAGCTTCTCCAAGCGCAAGGTAAGCAGAGGCCCTGGGTTC--------------------AGGCGTCCCATGTGGCTCTACCACCATCCCTGTACTGTTTGTTAGCGGTGGTTGGGGTCAGGTT-CCTAAGATAGGAGCTCTGG-------CTACTGCCTTCCCTTGGCCCATACT------GGCCAGTGACT--GAGATTCAGA------------------------------------CACCGAGAGTCCCAAGGGTC-CCCCAGGGCCAGGGCACTGCAGATATCTCTGTGGGCCAATTGGG-TAGAAGCTCAGGAACCTGGGCTGATAGC--CCCTACCCTGCACCTCCTGGTCTTTTACATGT-----CCTGGCTTGGTCTCAGGCCACAATTCCA-----------C-TT-----------     
25 Dipodomys_spectabilis-NW_024870976.1-181583_181805     90.4%  36.8%    --------------------------------------------------------------------------------------------------CTGACCCAATAA--TGCTGTCC----TGACCCTGGTCCTGCTG---TCCTGACCCTGTCCTGCTGTCCT--GACCCT------------------GGTCTGTCCTCCTGTCCTGACCCTGGTCCTGCTGTCCTGACCCTGTCCTGCTGTCCTGACCCAATAA--TGCTGTCCT------GACCCCGTCCTGCTGTCCTGACCCC---GTCCTGCTGACCTGACCTGATCTGACCCCATCCTGCTGTCCTGA-TCCCGTC-CTGCTGTCCTGACCCCATCCTGCT---GTCCTGACCCCATCCTGCTGTCCT----GACCCTGGTCCTCCTGTCCTGACCCTGGTCTGTCCTCCTGTCCTGACCCTGGTCCT----GCTGTCCTGACCCTGTCCTGCTGTCCTGACCCTG-----CTCAGTCCTGCTGACCTGACCCTGGTC------CTGCTGTCCTGACCCTGGTCTGTCCTT-----CTGTCTTGACTCTGGTCCT------CCTGTCCAGTCTCCAGCCCCACTGTCC---------TGATCCCAGCCCACTTCCCACCTTGCTCTCGGGCTGGCTCAGGTCATTCTCTTCCAGGAAGGCCTTCTGGGGCCACC----------------AGGGAGCTGCCCTACCCCGGCTGGCTGGTTTGAGTCTGG------GCTTACACTCTACCCATGTCTCCTAGGGGCAGAGCAGGGCCGAGGAGGACGTGGAGTCTGGGGAAGACACCGGCACCGGCAGGCGGAACAACCGCCTTCTCATGAGCAGCTTCTCCAAGCGCAAGGTGAACGGAGCTCTGAATCAGATCCCACGCATGGGGTCCTCCGCCCACCCCAGGACGGGGTCCCGCACATGGGGTCCTCCATCCACCCCAGGACGGGGTCCCGCG-----CATGGGGTCCTCCATCCACC--CCAGGAC-----GGGGTCCCGCGCA--------TGGGGTCCTCCGCCCACCCCAGGACG----GGTCCCGTGCATGGGGTCCTCCATCCACCCCA---GGACGGG------GTCCTGCA-----CATGGGGTC------CTCCATCCACCCCAGGACGGGTCC--------CGTGCATGGGGTCCTCCATCCACCCCAGGACGGGGTCCCGCGCATGG---------------GGTCC---------------------------------------     
   clustal                                                                                                                                                                                                                          *                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         *                 *                                                                                                                     ...  **.*. *.   . *. * .  **  * .  .*    .. ** .* *.  .*.*  *  * . ..* .. ** ** *.*** *****                                                                                                                                                                                                                                                                                                                                                                                                                            

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