Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%

                                                              cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .] 1311
 1 Target                                                  100.0% 100.0%    ------------AAGCCCCAGGTTCCAGGAGACCCA-GCACACTTGGGGTCTGCA------GCTGGCCAGG---GAAGGGCCTA-GTCTTA----------GGAG-GGGGCAGTGGTGGGAG----TGGCT-CTGA-GCCCACCCTCCGTGCCTGCGTCCTCTGGGCAGAG-----GGAGGGGAGCCAGCAGAACAGTCCTTA------------CAGACTCCACGTGCCGCCGAGGACGGAGCAGATGGG-CCAGTGTCCTGGGTCCAGCCCTCCATCTGCACAGCTAATGAGCTGATGACGATGGCGTCCCAGTTCCTGGCACCTTCTCCTGGAGAAGCCATGGGCTGGCC-CTGCCCGGG-CAGTGCCCTTTGCTGG-----GGCAGGTGTGTGTG-GGGTGCCTGGGGCCCTCTCAGGGACCCAGGCCCAGTGGCTCCACCTTCATTGAG--GGTGGGCAGGGGGAGGGGTTGGGGAAGGGGATGAGTAATCCAACGTGCCTGTTTCTTCCCGGGATTTTGCTCCCAGCACTGCATACGTGGGCTCCCACCG-GCTGGACGGACTTCCTGTGTGGGAAAGGCGAGTGGGCGCGGGCCTCCCGTGTGGGGGCAGGGTGGAGTTGGTGGACACCATCCCCAGGACAGGACGTTT--CCT---CTGGCTCCTGAGAAGTCAC--------------------TCACCGTGGTGGCCGC----AGGCATGGCTCCATGCTAGCTG-----------------GGTGAAGACCCCGAGAGGGGGCCTTGTGGCTG-ACG-GTCACTGGAGACAACAGTGAGCCACTCTGGTGGGA------CTGTG--GAACCCCCTCCAGCTCTGCCCCA-GAGAGCAGCACCTGGGTGAGGGCTACAGGAGGCTCTTT--CAGCAGG--CAGGTCCCAGGCACCATGATGC-AGCCCTGACTTGGGGAC-GGTGGCCA------CACT-GTCCT----------GGGAGTAGGTC------------CCT--TC-CACCGCTCAGACCTGG-CGACCCAGGAACACACCTCTGAGGGACTTGAGTGGTCTTGATTTCACATTGATCAGGCCCCTGG-CT-G-----CTCCGACTTTC-AG-GTCCCTGTTGTGGAGGTTTCGGGCGGCCC---------------------------------------------------AGTT--------------------------------------CTCAGGGGC------------------------------------------------     
 2 Saimiri_boliviensis-NW_024100927.1-175162_176099         98.2%  80.4%    -----------AAAGCCCCAAGTTCCGGGAGACCCA-GTATACCTGGAGTCTGCA------GCTGGCCAGG---GAAAGGCCTA-GTCTTA----------GGAG-TGGGCAGTGGTGGGAG----TGGCT-CTGA-TCCCACCATCCGTGCCACCATCCT--AGGCAGAG-----GGAGGAGACCCAGCAGCACAGTCCTTA------------CAGACTCCACGTGCCTCCGAGGATGGAGCAGATGGG-CCGGTGTCCTGGGTCCAGCCCTCCATCTGCACAGCTAATGAGCTGATGACGATGGCATCCCAGTTCCTGGCACTTTCTCCTGGAGAAGCCGTGGGCCAGCCCCTGCCCTGG-CAGTGCCCTTTGCTGG-----GGCAGGTGTGTGGAGGGGTCCCTGGGGCCCTCTCGGGGACCTGGACCCAGAGGCTCCACCTTCATTGAG--GGTGGGCTGGGGGAGGGGCTGAGGGAGGGGATGAGTAATCCAGCGTGCCTGTTTCTTCCCGGGATTTTGCTCCCAGCGCTGTGTATGTGGGCTCCCGCCG-GCTGGACAGACTTCCTGTGTGGGAAAGGCAAGTGGGCGCCGGCCTCCCGGGTGGGGGCAGGTGGGGTT-GGTGGACAC-CATCTCAGGACAGGATGCTT--CCT---CTGGCTCCTGAGAATTCAC--------------------CCACATGGGGTGGCCCCAGGCATGGGGCATCCATGCTAGCTG-----------------GGTAAAGACCCCAAGAGGGGGCCTTGTGTGGC-TGATGGTCACTGAGACACAAATGAGCTACTCCGGTGGGG------CTGTG--GAGCTCCCTCCAGCTCTGCCCAG-AG-AGCGGCACCTTGGTGGGGACCACAGGG--GCTCCT--GCAGTAG--CAGGTCCCAGGCATCAGGGTGC-AGCCCTGACTTGGGA-T-GGTGCCCA------CACT-GTCCT----------GGATGTGCGTC------------CCT--TCCTCATGCTTAGACCTGG-CGACCCAGGGACACACCTCCGAGGGAG-TGAGTGGTCTTAGTTTTACATTGATCAGGCCCCCAT-TG-G-----GGAGCTGACC-----------AAGGGCTGGGTTTCAGGCAGCCC---------------------------------------------------AGTT--------------------------------------CTCAGGGGCAGCGCTGTG---------------------------------------     
 3 Galeopterus_variegatus-NW_007727608.1-228116_228950      95.8%  59.4%    --------------CCCCAGGTTCCAAAGAGACCCG-AGGTGCCTGGGGTCTGCA------GCTGGTGGGG---GGAGAGCTCTGGTCTTAGAAGGGTAGGGGGG-CGGCCGCCAGCAGCAG----TGGCT-GTGA-GCCCACCCTCCATGCCTCCGTCCTCTGGCGGGGG-----CTCGGCTGGCACAGGGAGGTGTCACAGCGGTGTGGCCTTCCGTCTCCAC-GTGCAGCGAGAACAGAGCAGATGGG-CTGGTGTCCCAGGTCCG-GCCTCCATCTGCACAG-CTAAGAGCTGGTGACGAAGGTTTCCCAGCTCCTGGCACCTTCTCCTGGAGAGCCGTG-GGCCAGCCCCTGCCCGGG-CAGTGCCCTCTCCTGG-----GCAGGGCGGGTGGTGCAGGGGC--------TGCTCTGGGGCTGAGCCTGGCGGCTGCACGTTCCCTGCG--GGTTGGCTGGGG-GAGGGCCTAGGAGGGGGATGAGCAATCAGATGCGCTTGTTTCTTCCTGGGATTGTGCTGTCAGTGCCGCGCATGTGGGCTCCTGCCA-GCTGGACGGACTTCCTGTGTGCGGAGGGTGGGTGGGCATGGACCTCCTGCTGGGGTGGGGG-AGGGGGCAGTGGACACCCTTCCCAGCATGGGATGTTT--TCT---CTGGCTCCTGGGAAGTCAC--------------------CCACCTGGGCAGCCAAGGACATGGGGGTCCC--CACCAGCCA-----------------GGTGAGGGTGGCAAGCTGGGACCTGCATGGTT--------GACGGTCACAGGAGAGAGAAGCTTGCTTGGGT------CCTCT--GGAGCCCCTCCAGCTCTGCCCCA-GAGGGGGAACCCAGAGGGGGCCTGAG-GGAAGCACTGT--CAGCAGAC-AGGTCCTTAGGCACCAGGATGG-AGCCCCAACTTGGGGAC-ATTGAACT------GCACTGTCCG----------CAGTGGGCCCA-GG------GGAGCT--GTCCCAATCTCACATTGCCCAGACCCTGGGCCCTGCGTCCGCCCAGC-TGCCCTATTTCCTTCTGAAACTCTCCACGGCTCCGA-TGTT-CAGCCCCTGTGACTG-AG-CTGACCAAAGGCTGGGTTTTGGGGAG---------------------------------------------------------------------------------------------------------------------------------------------------------     
 4 Tupaia_chinensis-NW_006198262.1-168846_169528            95.1%  44.8%    -------------------------ATGGGGACCAT-ACATGCCTGGGGTCTATA------GCTGGTGAAG---GAAGAACCCTAGTCTTAGGAGGGAGTGG----ATGGCAGCAGTAGGAG----TGTCT-GCGA-GTTCACCCTCCATGTGCTCATCTTCTGGGGCCGAGGG-CTTGGCAGCCCCCTAGGAGGAGACACAGCAGCATGGCCTTTGGTCTCAATGTGCAGCCGAGGACAGAGCAGATGGGCCAGGAGTCCTGGGTCCGGCCTTCCATCTGCACAGCTAATGAACTGATGACGATGGTTTCTCTGCTCCTGGCACCTTCTCTGTGGGCCAGCCCTGCCCGACTAGTGCTGTCT-CCTGGGGCAGGGGTTTGGGCAGGCAGGGTTGAAGGGGGTAGTGTGTGGAGGGCCCTCTCTGCCGAGCCT-ACAGATCCACACTCCATGAGGGTTGGGCTGGGCGAGGGGGCTGAGGAGGGGAATGAGTAATCGGACATGTCTGTTTCTTCCTGGGATTTTGCTTCCAGCACAGCGTACGTGGGCTCCCGCCG-GCTGGGCGGACTTCCTGTGTGGGAAAGGCAGGTGGACACAGGCCTCATTGTGGGGCAAGATGGGGGT--GGTAGATGTTATCCCCATGGCGTGGCAACT--TCT---CTGGCTCCTGGAAGTCCCT--------------------CACCTG-GCAGCCCAG----AGCATGTGGCCCGTATCAGCTG-----------------GGTGAAGGAACCAAGCTGGGATCTTGCATGGC-CAGTGGTTGTAGAGAGATGGGAGC---------TTT--------------------GGACCCCAGCTCTGCCCAA-GAGGGGGCACCCAAGCAGGG-GCCAGAGGACGNNNNNN--NNNNNNNN-NNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNNNN-NNNNNNNN------NNNNNNNNNN----------NNNNNNNNNNN-NN------NNNNNN--NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNN-NNN-NNNNNNNNNNN-NN-NNNN--NNNNNNNNNNNNNNNNNNNNNNN---------------------------------------------------NNNN--------------------------------------NNNN-----------------------------------------------------     
 5 Lemur_catta-NC_059130.1-162751_163162                    86.0%  36.1%    -CCGCCCTGGGCTGGCCCCCGGGCCC----------------A--GGACGCCTGCCTGCCACC-GGGCAGGGCT-GGCCGCTTCCTGGGGCC----CTGACACAC-CGGGG---GTCTGCAGCCGACGAGGGCAGCGGCCT-GGTCCCGGGAGGGCAGAGGCTG---AGAGCCC---CCCGCCCCCGCCCCC-CGGCCACAGCAGCGGGTCCCAGCAGTCTCCACGTGCAGCGGAGGACGGAGCAGATGGG-CCGGTGTCCTGGGTCC-GGCCTCCATCTGCACAGCTAATGAGCTGATGACGATGGTTTCCCGGCTCTTGGCACCTTCTGGAGAGCCGTGGGCCGGCCCTGCCCGGGCAGTG--CCCCTCCTGGGGCAGGCG--TGGG--GGGGTGCAGGGACCTCCTGGGGGCCA------A---GCCC-------------AGGGGCCCCACAGTCACAGGGTGGCTGGGGGAGGGGACGGCAGAGAGTAACCGCATGAGCCTGTTCCCTCCTGGGATCTTGCTTCCAGCACCGCGTACGTGGGCTCCTGCCA-GCGGGACAGACTTCCTGTGTGGGAAAGGGTCGGGCACGGGCCACGTGGGGTTGCTGGGCACC-ACCCGGGATGGAGTCGCTTC-TCTGGCTCCTGAAAGCCACCAC-TGGGCAGGCCCGGGCACGGGCCCCGCGTCCACCAGGTGAAGGCCTGGGC--GTGGGGCAGGTGGAGCCCCTGATGCGGCAC-------------------------GTG------------------------GCCACACTGCC--------------------CTGGGGCTGGGTCCCCTCCGCCTGCTCAGACACTCGCGTGGCCCAGGCGCACAC--TCTGAG-GGCCTCTGCCGTCTCCATGTCACACCGGCCGGGCCCCGGCTGCACCATTTCCTCCTGGAGCTCCATGGCACTGA-------------CTTTCAGACCCCTGATTTCGGGCAGCCCCGTGC------------CCTCCTGGGTCAGCGGGGGCGGGGC---AGACGCAGGGACTGCCGCGCCGGCCCCCAAAGGGCAGAGGCACTGATGGGACCTGCCAGAGCAGGGGACTGGGGCGGGGCCACGTCACAG--GTGCTGGAAGCTCGAGGAAGCTGCTCCTGGCC----------------------------------------------------------------------------------------------------------------------------------------     
 6 Propithecus_coquereli-NW_012152752.1-164457_164926       77.2%  29.9%    ------------------------CT----------------G------CGACTGGACAGGGG-CTGCTGCTGC-CAGGGCTTCCTGGGGAC----CTGACCCAC-CTGGG---GTCTGCGGCCAACGAGGGCAGAGCCCT-GGTCCTGGGAGGGCAGTGGCTG---GGAGCCACCCCCCACCTCCGTCCCC-TGGCCACAGCAGCATGTCTTAGCAGTCTCCACGTGCAGCGGAGGACGGAGCAGATGGG-CCGGTGTCCTGGGTCTGGCCCTCCATCTGCACAGCTAATGAGCTGATGACGATGGTTTCCCGGCTCTTGGCACCTTCTGGAGAGCCGTGGGCCGGCCCTGTCCCGGCAGTG--CCCCTCCTGAGGGCAGGC--CTGTGGGGGGTGCAGGGGCCTCCTGGGGGCCA------A---GCCC-------------AGGGGCCCCACAGTCACAGGGCGGCTGGGGGAGGGGACGCCAGTGAGTAACTGCATGAGCCTGTTCCCTCCTGGGATCTTGCTTCCAGCACCGCGTACGTGGGCTCCTGCTG-GCTGGACAGACTTCCTGTGTGGGAAAGGGTCAGGCACGGGCCCTGCATCCACCCG----------------------------GTGAAGGCCTGGGCGTGGGAC-G-TGGC-----------------------------------------------------------------------------------------------------------------------------------CACAC-TGC--------------------GCGGGGCCGGGTCTCTTCCGCCTGCTCAGACCCTTGCGCGGCCCAGGCCACATTCCGAGGGA-CTTAGC---CGTCTCCCCGTCACACCGGGCAGGCTCCGGCTGCACCATTTCCTCCTGAAGCTCCATGGCACTGA-------------CTTTCAGACCCCTGATTTTGGGCAGCCCTTGCC------------CTCCT-GGGTCAGTGGGGGCAGGGA---GAGCTGTGCTGGCCCCCCAAGGGCAGGAGGCACCGATGGGGGAC-------CCGCGAGAGCAGGGGCATCGGGGCGGGGACACGTCACAGGATGCTGGGATGCTCGAGGAAGCTGCTCCTGGCCTCGCGGTGGCCCGGGCTGCCTGGCCTGGCGGAGTGGCCCAGCGCCCGGGCACGGATCCCATGGCCCGGCCACCTTCCGTTTCCTCGTCTCCTCTGTGCGCCGTGCCTGCCCTGCCTGGCGGCTGCCCAGCTACCAC     
 7 Ceratotherium_simum-NW_004454172.1-169377_169786         89.5%  41.7%    --------------AGCTCTGGTCTTGGGAG------GGGAGTGGGGTGGCAGCG-GCAGAGCAGCTGTGA---GCTCACCCCCTGTGCCCCCGTGTTCTGGGCTGAGGGCTCGGCCAGTCT----TGAGGGAGGG-GACATGTCACCTGGCCCTTATCTGCTGGGACAAA----C---------ATGCCTGCG-GCCCCTCCCGGGGGGAGAACAGTCTCAAATGTGCAGCTGAGGACAGAGCAGATGGA-CTGGAGTCTTGGGTCCGGCCCTCCATCTGCACAGCTAATGAGCTGATGACGACGGTCTCTCTGCTCCTGGCACCTTTCTCCCGGGAAGCCAGTGGATGGCCCCTGCTGGG-AAGGGCCCTCTCCCGGGGCAGGGTGTGTGTGTGTGTGGGTGAAGGGGGCCCTCTTTGGTGCCG---------------------AGGCCAGGGCTTCACAGGGGGAGGGCATCGAGGAGGGAGATGAGTAATCGGAAGTGCCAGTTTCTTCCCAAGACTTTGCTTCCAGCTCGGCATACGTGGGCTCCGGCCG-GCTGGACAGACTTCCTGTGTGGGCAAGGCCGGTGGGCGTGGGCCTCCTGGGTGATGTGACGGACA--CCCTCCCAGGA-----------C---AGTGTTT-TCT---CTGGCTCCTGGGAAGCTGTGGGGAAAGG----AAGTCTCCCACCTGGGCAGCGGGG---CAGCGT----------------------GCATGC-----CCTGGAAGACCCAGGGTGGAGCTTTGTGTGCT-GGATGGTCGGCCAAGGGAGAAG--TAAGCTGCTCTG-AGAG---TCATCT--GCTCAAGCAGCACTGGGGGCCCG-TGGACCCCCTCAAGCTCTGTGTCCCGAGAGTG---------GGGGACC-CAGGTGGGGTGCCTGAGGACAGCTCCATCAGCAGGCAGGTCTTTAGGAG------CCACCGACTC----------AGAAACAGTGG-GCCAC-ACTGCCGT--GGGGTCCACTCAGCCTGCTCAGATCCGGA-GACC-AC-AGGCATGCTGCCAAGTGA------------CCCAGGGTGGTCTTGA-TTTCACGTTGATCGGGAGCC-AGCCTGGCCGAGGCAGGCTCTGGCCCCCCTTCAG---CTGACCTGC------------------------------------TGTTTC----------------------------------------------------------------------------------------------     
 8 Vulpes_vulpes-NW_020356486.1-175380_175758               88.1%  39.2%    -------------------------------------------AGGGTAGTTGCAACAGGAGCAGAGGGGA---GCTCACCCCTCAGGCACCCACTGTCTGGGTC-AGGGTCTCAGCTCACC----TCGAGGTGGA-GATGTGTAGCATGGCCCTGGTCTGCTGGGATGAA----TGTGCTGCGCCCCTCCTGCCTCCCCCCTCCGGGAGAGAACAGTCCCAAATGTGCAGCTGAGGACGGAGCAGATGGG-CTGGAGTCTTGGGTCCGGCCCTCCATCTGTACAGCTAATGAGCAAATGGCATGGCTTCCACGCTCCTGGCACCTTCTC--CTGGAGAGCCAGTGGCTGGGCCCTGCGGGA--ACATGGCCCTCTCCTGGGGCAGGTGTAAGTGAGGGGGATGCAGAGGGCCCTCTC-----CTGTGCAGAGGCCAGCCCCATGCTCCTTGAGGGCTGTTGGGGGCA-GAGGCATCAAGGAAGGGATGAGTAATCAGAAGAGCCTGCTTCTTCCTGGGACTCTGCTTCCAACAGAGCGTACGTGGGCTTCCGCCG-GCTGGACGGACTTCCTGTGTGGGAAAGGCCGGTGGGCGCGGGCCCCTCG---GGTGGGGACACACACCCTTCCCAGGA-----------CAAGATGTTTTATTT---GGC--TCTTGGGCAGCAC-----ACAGATG------------------------------------GGCCTCCGTATGGAGGGGGCATCGTGCC----CTGGAAGACCCTAGGATGGGGCCTGGGGGGCT-GGATGGTCACACGG---------------------AGAGGT---CAGAGT--GGTTCCTGGAGGTCTTGGCTTCA-CATCGACAAGAAGTGGTCCCGGCCCAGGCAGGCCCCAACTCTGGTCAG-CTGAGCTTCGGGGCTTTGGGAGCTCCCTGTCAGTCAGGGC-GTGTGGTG------TGGCTGACCC----CAGGCCAGGTGTGGGTG-GC--------CCCT--CCTGAGCTCCCTCCCAGGTCAGCCAAGGGCGTGCGAG-GGGG----------GGAAGTCAGGGTGACACTCAGGGAGGCGCTCC-TGGCCCAGCCCACACAAGGG-AGTGGGAGGGGTGCTGCACAAGGCAGAGGGGACCTTAGGAGAGCCC------------------------------------AGCTGTTTCTGGACAATCCT----------------------CA--------------------------------------------------------     
 9 Vicugna_pacos-NW_021999318.1-173679_174072               89.4%  39.9%    ------------AAGAGTCTGGTCTTGGGAG------GGGAGTGGGTGGCAGCAG-CAGGAGTAGCTGGGA---GCCCACCCTCCAT-GCCC-----------------CATCCTCTGGGCT----CCAGGGAGGA-GGCATGCGACATGGCCCTCATGTGCTGGCACGAG----C---------GTGCTGGCGGCCCCCTCCCAGAGAGAGAACAGCCTCAAACGTGCAGCCGAGGACAGAGCAGATGGC-TGGAGT--CTTGGGTCCGGCCTCCATCTGCACAGCTAATGAGCTGATGGTGATGGTTTCGCCGCTTCTGTCACCTTTCTCCTGGAAAGACAGTGGCTGGACCCCTGCCAG-GAAGTGCCCCCGTCCTGGGGCAGGGGGTGGACGGGGGGCTGCGAGGGGCCCTCTCCTGCGCTGTGCCAAGGCCGGCCCCCCATGCACAGAGAGCTGTCGGTGGGAGGGGCGCTGAGGAGGGGGATGAGTAATGCAAAATGCCTGTTTCTTCCTGGGACTTCGCTGCCCGCCCGGCATACGTGGGCTCCCTCCG-GCTGGATGGACTTCCTGTGCGGGAAAGGCCAGTGGGCGTGGGCCTCCAGGTGGGGCAGCTGACCC--CTCCCCAGGAT-----------G---GCCTGTT-TCC---CTGGCTCCTGGGGACCTGTGGAGAGAGG----AAGCCACCTGCCTGGGCAGCCCTT---GACCAGAGCCCCCTCCCCCACCAGGGCCGTGTGA-----GTGGAGGACCCCAGAATGGGGCTTTGAGTGCT-GGCCCATCGGCCAAGGGAGGAGTCA----GCCT-CCCGAGC---CCACCT--GCTCGAGCAGCACC---AGGGGC-CCTGTGG-------------ACCCCTCAAGCT---------TGGTGTC-CCGGGGCGGTGCCCAGGGAAGGCTCCGTCAGCAGGCAGGTCCTTGGGAG------CCGTGAGGAAGCCCCCAC--------------------CCTGACCT--GGGGTCCCCCCAGGCTGCTCAGATCCAGGGATCC-AC-AGACAGGCTTCTAGGTGA------------CTTAGGGTGGTCCCAG-CTTCACACTGAGCACGAGCT-GGCCCGGCCCAGGCCCCAGTTTCCATCAG--------CTAAGCCAC------------------------------------TGCTTCCTTCAG----------------------------------------------------------------------------------------     
10 Callorhinus_ursinus-NW_020313076.1-174563_174991         89.5%  41.6%    GCCATCAAGGGAAGGGCCCTGGTCTTGGGAG------GGGAGTGGGGTGGCAGCTGCAGGAGCAGATGTGA---GC---------------------CCACCCTT-CATGCCCCCACTGTCT----GGGAGGGGGA-GACGTGTGGCGTGGCCCTTGTCTGCTGGGGTGAG----TGTGCTCC-----CTC---GCCTGCCCCCCGGGAGAGAACAGTCTCAAACATGCAGCTGAGGACGGAGCAGATGGG-CTAGAGTCTTGGGTCCGGCCCTCCATCTGTACAGCTAATGAGCTGATGGCATGGTTTCCATGCTCCTGGCACCTTCTC--CTGGAAAGCCAGTGGATGGGCCCTGTGAGG--AAGTGCCCCTCTCCTGGGGTGGGGCATGCGTGACGGGGAGGCAGAGGGCCCTCT-----CGGTGCAGAGGCCAGCTCCACACTCCTTGAGGGCTGT-CGGGGGTAGA-GGCATCAGGGAAGGATGAGTAATCAGCAGTGTCTTTTTCTTCCTGGGACTTTGCTTCCAG-----CAGACGTGGGCTTCTGCCG-GCTGGATGGGCTTCCTGTGTGGGAAAGGCCGGTGGGCGCGGGGCCCCCCGGGCAGGGAGACAGACACCCTTTCCAGGA-----------CAGGACGTGTTTTCT---CTGGCTCTTGGAGAGGAGCTTTGAGGGGGAGGAAGCTGCCCACTTGGGCAGTCCCC---CAGTGGGCCTCCATACCAGCCAGGGGCAGCCAGCC----CTGGAGGACTCCAGGAT-GGGGCTCGTGTGCC-GGATGGTCAGTTACTGAGAGCAGGAA-GCTGCTCTCAGAGG---CCATGT--GCGTCCCGGTGGTCTCGGTTCCA-CATGGATGGGAAGTCACCCTGGCC--------------------CAGG-CAGACCCTGGACCCTTTGGAAACTCCCCTGTCGTTCAAGC-CGTGGGTG------GAGCTGACTG----TGGGCCAGGCGCAGGCG-GC--------CACT--CCTGGGCTCCCTCCCAGGTCAGCGGTGGGCATGTGGG-GGGACAACACCGAGGGGAGTCAGGGTGACGCTCAGGGAGGGCGCCA-CCTGGCCCCGCAGGGGCACT-GGCCCAGCCCATGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
11 Castor_canadensis-NW_017871110.1-156882_157376           82.0%  32.7%    -------------GGCCCCAGGGTCCAGG---------GTTCAGGGAGACTGGACACACTTGGGGTTTGTAGCT-GCTGGAGGGAAGAACCCTGGTCTTAGAAGG-GGAGGGTTGGTGGCA-GCAGAGCAGCTCCAAGCCC-ACCTCTTTGCCTCCATCCTCTG---GGCAAAGGACTGGCACC--CGGAAGGAGCTTCAATGGCACAGCCCTTGCAGTCTCAATGTGCAGCCGAGGATGGAGCAGATGGG-TCTGCGTCCTGGGTCCAGCCCTCCATCTGCACCGCTAATGAGCTGATGACGAAGCCTCCCCAGCTCCTGGCACCTTCCTTGGAGAGTGGTGGCTCCTGCTGGGCAGCGCCT--T----CTCCTGGGGCAGG--TGTGGGGTTCAGGGGCCCTCTGTGAGGCCAGA----------GCCCGTGGCTCTATGT------------------------CCAGAGAGGGCTGACGAGCATGAGTAATCGGACAAGCCTGCTTCTTCCTGGGAGTTTGCTTCCAGCACAGTACACGTGGGCTCCTGGCTGGATGGACAGACTTCCTGTGTGGGGAAGACATGGGGCAGAGTGGGGGGAGTGGGCAGCATCTCTGGATGGGAGGTT--TTCTTTGGCTTCTGAGAAGTTACCTACCT-GGCAGTCCTGGGTACAGCGGTCCCACACTAGTCAAGTGAAGACCCCAA--GATGTGACTGATGATGGTGGG-AGAGAGAACTGAGCTGCTGAGG---------CAG----------------------------------------------------------GCTCAAGG--GAGTCAGAGAGATCCTTCGGTACAAGGGTG----------GAGTTCTGACTT-GGGGGGCAATGGGCTG--CTCTGTCC----TG-----AGGGGGGCCCCAGCTTGCTCAGACCTGGTGGCCTAGGGATCTCAGAGGGACTTGGGGCATCTGGACTTCAGGTTGGTCAGGTTGGGGTC----------CTATAGCAGCTGTTGCCCTGT-----TTCCCTCTGAAGCTCTCCAAGGCTCCACCTTCCAGCCCCTGA-------------GGTTGAACTGACCAAGGGCTGGTCTCAGCCCAG---------TTCTCAGAGGAATCTGTG----CCCCTCTGGGTC--------AGCCTGGTGAGAGTAGAACTGGGGAGAGC------------------------------------------------------------------------------------------     
12 Ursus_arctos-NW_020656172.1-174562_174919                89.7%  41.2%    -CCTGCCTGTGAACGGAGTGGGGCCTGGCAGCTCCCAGGGTCCAGGGAGGCCCGACACACCCAGGGTGTGC---AG---------------------CCAGCAAG-GGAAGGGCCCTGGTCT----TGGGAGGGGA-GGGG----------GGTGGCATGGCTGGGGTGAG----T---GTGC-----TTCCCCCCCCCCCCCCCGGGAGAGAACAGTCTCAAATGTGCAGCTGAGGACGGAGCAGATGGG-CTGGAGTCTTGGGTCCGGCCCTCCATCTGTACAGCTAATGAGCTGATGGCGTGGTTTCCATGCTCCTGGCACCTTCTC--CTGGAAAGCCAGTGGATGGGCCCTGTGGGG--AAGCGCCCCTCTCCCGGGGCAGGGCCTACGTGAGGGGTGCT-GAGGGCCCTCTC-----TCGTGCAGAGGTCAGCTCTGCGCTCCTTGAGGGCTGTCGGGGGGTAGA-GGCATCAAGGAGGCATGAGTAATCAGAAGTGTCTTTTTCTTCCTGGGACTTTGCTTCCAG-----CAGACGTGGGCTTCTGCCG-GCTGGACGGACTTCCTGTGTGGGAAAGGCCAGTGGGAGCGGGCC-CCTCAGGCAGGGACACAGACACCCTTTCCAGGA-----------CAGGATGTGTTCGTT---CTGGCTCTTGGAGAGCTGGAGGGGGAGGAA----GTTGCCCACTTGGGCAGCCCCC---CAATGGGCCTCCATACCAGTAAGGGGCAGCCAGCC----TGGGTGGATCCCAGGTTGGGGCCTCATGGGCC-GGACAGTCAGTAATAGAGAGAAGGAA-GCTGCTCTCGGAGT---GCACGT--GAGTCCTGCTGGTCTCGGTTCCA-CATAGATCGTAAATCACCCTGGCCCAGGCAGGCCCTGGCCCCGGTCTG-TTGCGCTGCTGACCTTTGGAAACTCCCCTGTCGTTCAAGC-CATGGGTG------GAGCTGACCA----CTGGCCGG-TGCAGGCG-GC--------CCCT--CTTGAGCTCCGTCCCAGGTCAGCGGCTGGCATGTGG---AGGCAGCACCGAGGGGAGTCAGGGTGACGCTCAGGGAGGGCTCCA-CCCTACCCTGCAGGGGCCCT-GGCCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
13 Nannospalax_galili-NW_008355419.1-155797_156276          83.9%  32.8%    --------------------------CAG---------GGTCTGGAAGATGGGACACATGGGAGATTTGTAGCT-GCGTAAGGGAAGAGCCCTGGTCTTAGGAAG-GGAGGGGGTAGTGGTGGCAGGAAGACTACAAACCC-ACCTCTTTGCCTCCATCCTCTA---GGTGAGGGCTGGTGGCCTCAGGGGAGAGATGCAACAGCAGGGGCCTCGCAGTCTCAATGTGTAGCCGAGGATGGAGCAGATGGG-CCGGCGTCCTGGGTCCAGTCCTCCATCTGCACCACTAATAAGCTGATGACGAAGGCTCCCCAGCTCCTGGCACCTTCTCTGGAGAGCCAGGCAGCCTCTGCCCAGGGAAAC--GCCCTCTCTTGGGACAGG--TGTGAGGGTAGGGGGCCTA-TCCTGGGCCAGA----------GCCTGTGGCTCCAGCTCAGAGAGTT----GACTGGAGGAGGGTTGGGGAGGGGGAATGAGTAATCAGAGGAGGGAGGCTGCCTCTTCCTGGGAGTTTGTTTCCAGCACAGTGTATGTGGGCTCCTGGCTGGCTGGACAGACTTCCTGTTTGGGGAAGGGAAGGGACAGGATGGGGGAGGTAAGCACTGGTTTCACAATGGGGTGT-TCTCTTTGGTTTCTGGAAGTCACTCCCCTA-GGTGC----------AGAGGCTCTATACCAGCTAGGTGACATCCTTGA--GCTGTGGTTGGATGTCCCCCT-TGAG------------------------------------GGGCTGGCCTTGGGACCCCCTCCAGTTCTGCC--------------------CAAGAGGG--GACCCAGGCAGATCCTGAGGTATGAAGGTG----------GAGGCCAGACTT-GGGAGCAACTGGCCAC---TCTCTCCTGGGGT-----GGGAGGTGCTCAGCCTGCTCAGAGTCAGCAACACAGAATTCCCAGGGGGACTGAGGGTGTCTGGGATTCAGGTCGGTCAGGCCGCAGCC----------CTGTGTCAGTGATAGTGCCAT-----TTCCTGCTGGAACTTTTCAGGTCTCCAGCTTCTGGCCCTGTA-------------GTTGAGAT-AACTGACTGG--CAGC----CCAG---------TTTGCAGATGCTGCTGCCTGTGCCATTTTGGGTC--------ATCAGGGATGATGAG--------------------------------------------------------------------------------------------------------     
14 Equus_asinus-NC_052181.1-171077_171435                   89.4%  41.1%    -----------AAGAGCTCTGTTCTTGG----------AGGGGAGGGTGGCAGGA-GCAGAGTAGCTGCAA---GCTCACTGTCTGTG-CCCTGTGCTCTGGGCCGAGGGCTCAGCCAGTCT----TGAGGGAGGA-GATGTGGCACGG---CCCTACCTGCTGGGACGCT----C---------CTGCCTGTT-GC--CCCTCCCGGGGAGAACGGTCTCAAATGTGCAGCTGAGGACGGAGCAGATGGG-CTGGAGTCTTGGGTCCGGCCCTCCATCTGCACAGCTAATGGGCTGATGATGACGGTCTTGCTGCTCTTGGCACCTTTCTCCTGGAAAGCCAGTGGACGGGCTGTGTTGGG-AAGGGCCCCTCTCCTGGGGCAGGGTGTGTGTGCGGGGGGTGCAGGGGACATTCTCTGGTGCTG---------------------AGGCTGGGGCCCCACGGGGTGGGGGCATCGAGGAGGGGGATGAGTAATCGAAAGTGCTGGTTTCTTCCTGGGACTTTGCTTCCAGCTCGGTGTACGTGGGCTCT-GCCG-GCTGGACAGACTTCCTATGTGGGAAAGGCCGGTGGGCGTGGGCCTCCCGGGTAAGGGGACGGATG--CCCTCCCAGGA-----------TGGGGGGGTTT-TCT---CTGGCTCCTGGGAAGCCGTGGGGAGAGG----AAGTCTCCCGCCCGGGCAGCCCCC---CACCAGCCAGGG-------------GCAGTGTGC-----TCTGGAAGACCCAGGGCGGAGCCTCGTGTGCT-GGACGGTCAGCCAAAGTGGGGGGGGAAGCTGCTCTGAGAGT---CCACCT--TCTGAAGCAGCACTGGGGGCCCA-TGGACCCCGTCAGGCTCTGTGTCCCCAGGGTG---------GGGGAAT-CAGGTGGGGTGCCTGAGGGCGGCTCCATCAGCAGGCAGGTCCTTAGGAG------CCACGATGGAGCCCCTGACTTGGAAACAGTG-GCCAC-ACTGCCCT--GGGGTCCCCTCAGCCTGCTCAGATCCAGG-GTCC-AC-AAACATGCTGCCAGGTGG------------CTCGGGGGGGGCTCGA-TTTCACATTGATTGAGAGCC-GGCTTGGCCTCACGTCAGCTGAGCTGTTGCTC------------------------------------------------------------------------------------------------------------------------------------------------------     
15 Microcebus_murinus-NC_033661.1-161756_162101             82.0%  32.3%    ----------------------GGCA----------------G--GGGCTGGCCGCTGCCAGG-GCCCCCAGGC-CCCGGCTTCCTGGGCAC----CTGACTCAC-CCGGGTCTGCAGCCGACGAGGGCAGACGGAGCCCT-GGTCCTGGGAGGACAGTGGCTG---GGAGCCCCTGCCCGCCTCCGTGCCC-TGGTCACAGCAGCCTGTCTTAGCAGTCCCACGTGC--AGCGGAGGACGAGCAGATGGG-CCGGTGTCCTGGGTCCGGCCCTCCATCTGCACAGCTAATGAGCTGATGACGATGGCTTCCCAGTTCTTGGCACCTTCTGCAGAGCCGTGGGCCGGCCCTGCCCGGGCGGTG--GCCCTCCTGGGACAGG-C--ATGGGGGGAGTGCAGGGGCCTCCTGGGGGCTG------A---GCCCAGGGGCTGGGCAGGGGCTGGCCATAGACACAGGGAGGCTGGGGGAGGGGACGGCAGAGAGTAACCGCACGAGCCTGTTCCCTCCTGGGGTCTTATCTCCAGCACCGCGTACGTGGCTCCCG-CCA-ACTGGACAGACTTCCCATGTGGGAAAGGGACAGGCACGGACCGCGTGGGGTTGGTGGGCACC-ACCCCAGGAGGGAGTGACTTCTCTGGCCCCTGGATGCCACC-G-TGGC-----------------------------------------------------------------------------------------------------------------------------------CACCC-TGC--------------------CCGCGGCCGGGTCTCCTCCGCCTGCTCAGACCCTCGTGCGGCCCAGGCCACACGCCCAGGGA-CTCGGCCAGAGTCTCCATGTCACCCCGGCCAGGCCTGGGCTGCGCTATTTACTCCTGAAGCTCCATGGCACCGA-------------CTTTGAGACCCCTGATTTCGGGCAGCCCCTTGC------------CCTCCTGGGTCAGCGGGGGCGGGGC---AGACGCAGGGAGAGCCGCGCTGGCC--CCCACAGGGGACGGGGA-------CCCGGAAAGCAGGGGGATTGGGGCAGGGCCAGGTCACAGGATGCGGGGACGCTCGAGGAAGCTGCTCCTGGCCTCGCAGT---------------------------GGCCCAGCGCCCGGGCACGGGTCCCATGGCCCGGCCGCCTTCCGTTTCCTTGTCTCCGCTGTGCGCTGCGCCTGCCCTGCCTG-------------------     
16 Balaenoptera_acutorostrata-NW_006725355.1-171746_172174  89.2%  39.8%    --------------CAGCCTGGGCTTGGGAG------GCGGGTGGG--GTGGCAG-CAGGAGCCGCCGTGA---GCCC-ACCTCCGT-GCCCCGTCCTCTGGGCTGAGGGCTCGGCCCACCT----CGAGGGTGGG-GATGTGCGGCGTGGCCCTTATCTTCTGGGACGAG----C---------GTGCTGGG-CCCCCCTCCCAGGGAGGGAGCAGTCTCAAGCGCGCAGCTGAGGATGCAGCAGATGGC-TGGAGT--CCTGGGTCCGGCCTCCAGCTGCACAGCTGATGAGCCGATGGCCGAGGTCTCGGCTCTCCTGTCACCCGTCTCCTGAAAAGCCAGTGGTCCGGCCCCCACCGG-GAAGCGCCCCTCTCCAGGGACAGGGTGTGGGTGAGGGGCACGCGGGGGC-CCCTCCTGTGCCCTGCCC-GGGCGGCTCCACGTTCTCTGAGAGCTGTCGGTGGGAG-GGGTTTGAGGTGGGGGATGACTAATCGGAAATGTCTGTTTCTTCCTGGGACTTTGCTTCCAGCT-------CGTGGGGTCCCGCCG-GCTGGACGGACGTCCCGTGTGGGAAAGGCGGGTGGGCGTGGGCCTCCAGGTGGGGCAGCGGATGT--CCTCCCCAGGA-----------C---AGGATGT-TTC---CATGGCTCCTGCGAGCTGTGGGGAGAGG----AAGTCACCCACCTGGGCAGCGCTC---GACCAGGGCTTCCACACCCGCCGGGGCAGCGTGT-----GCGGAGGGTCCCAGGGTGGGGCCTCGTGTGCC-AGCCGGTCAGCTGAGGGGACTGAGC----TGCT--CGGAGT---CTGCCT--GCTCAAGCAGCGCC---AGAGCC-CGTGGACCCTCAAGCTCAGTGTCCCAAGGGTG---------GGGAGTG-CAGGCGTGGTGGCCCAGGCAGGCTCCGTCAGCAGGCGGGTCCTCGGGAG------CCACCATGAAGCCACCGCTCAGGGACACAGG-GCCACCCTGTCCTG--GGGGTCCCCTCAGCCTGCCCAGGTCTGGGGACCC-AC-AGGCAAGCCTCCAGGTGA------------CTCAGGGCGGTCCCGA-TTCCACACTGAATGGGACCT-GGCCTGGCCCATGCCCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------     
17 Otolemur_garnettii-NW_003852462.1-161908_162224          85.4%  32.0%    ----GCTTGGGATGCCTGTCTTCTGACTG---------TTTGA--GAGCTGGCTGCTGCCAGAGTTACCAAGGAACCTGATTCCTGGGGCAC----CTGACACAC-CTGGG---GTCTGTAGCCAACAAGGACAGA-GCCT-GGTCCT-----------AGAAG---AGCCCACCTTCTCTACTCCATCCCCTGGCCATAGTGGCATGGTCTTACCAGTTTACACGTGCAGCCAAGCACAGAGCAGATGGG-TTGGTGTCCTGGGTCCGGCCCTCCATCTGCACAGCTAATGAGCTGATGACGATGGTTTCCCGGCTCTTGGTACCTTCTGGAGAACTGTGGGCTGGCCCCTGCCTAGGCAGT--ATGGGGTGCAGGGAGCCC--TGTTGGG-------------------GGCCTG------A---GTCC------------AGCAGCTCCATGTTCACAGGGTGGGCTGGGGGAGGGGATGGGAGTGAGTAATTTGATGAGCCAGTGTCTTCCTAGGGATTTGCTTCCAGCACAGCATACGTGGGCTCCTGCTG-GCTGGACAGACTTCCTATGTGGGACAGGAGCAGGCAGAATAGGGTTGGTGAGCACCACCCCC-AGG------ATGTTCCATATGAAGCCGCCCACCTGGGCAGC---------CCTGGGCTTAGGACCCCCATGTCCACCAGGTGAAGGCCTGACG--GTGCAGCAGGATAGAGAAGTGAGGTGCTCAGGGGCTCACGGGATCACAGCAGCAGGTGGAGCCTCTGACGTAGGGATAGTGGACCATGCTGCC--------------------CTGGGGCTGGGTCCCCTC-CTCTGCTCAGACCCAGTGGCCCAGGCCCTCCCCACCATCACTG-GACTCCAACTGCCTCCATCTC--ACACAAGTCAGCCCCGCCTCTCCATTTCCTTCTGAAACTTTGTGGCACCAG-------------CTTTTGGACCCCTGGTTTCAGCTTCATTCTCAGGGGAGCCCCTGTCCTCCTGAGTCAGCAAAATGAGGAACACAGCCCTGGGGAGAGCCCCACTGGCCCCCAAAAGCAGGAGGCACAGACAG---------------------------GGCAGTCAACTCAGGCCCAGGGGAACCGGGGAGGGGCTAGG-----------------------------------------------------------------------------------------------------------------------------------------------     
18 Mustela_erminea-NC_045623.1-175609_176019                90.6%  40.4%    -CCAGCAAGGCAAGGGCCTTGGTCTTGCGGG------GGTAGTAGGGCGGCAGCCGCAGGAGCAGATGTGA---GC---------------------CCACCCTT-CGTGCCCCC--TGTCT----GGGAGGGGGA-GACGTGTGGCATGGCCGTTGTCTGTTGGGGTGAG----TGTGTTGC-----CCGCCCCCCCCCCCCCCCGGAGAGAACAATCTCAAATGAACAGCTGAGGACAGAGCAGATGGG-CGGGAGTCTTGGGTCCGGCCCTCCATCTGTCCAGCTAATGAGCTGGGGGCGTGGTTTCCTCACTCCTGGCACCTTCTC--CTGGAAAGCCAGTGGATGGGCCTTGTGGGG--AGGCGCCCCTCTCCTGGGGCAGGGGTCTGTGCGGGGGGTGCAGAGGGCCCTCTT-----GGGTGCAGAGGCCAGCTTCACGGTCCTTGAGGGCTCT-CGGGGGTAGA-GGCATCAAGAAGGGATGAGTAATCAGAAGTATCTTTTCCTTCCTGGGACTTTGCCTCCAG-----CAGACGTGGGCTTCTGCCG-GCTGGATGGACTTCCTGTGTGGGAAAGGCCGGTGGGCGCGGGCC-CCTCGGGCAGGGAGACAGACACCCTTTCCAGGA-----------CAGGATGTATTTTTT---CTGGCTCTTGGAGAGCTGGAGGGGAAGGAAGCC----TCCCACTGG--GCAGACTC---CAGTGGGCCGCCGAACCAGCCAGGGGCA----GCC----CTATAGGACCCCAGGATGGGGCTTCGCGTGCC-TGACAGTCAGTTATAGAGAGAAGGAA-GCCGCTGTGAGTC-----CACGT--GAGTCCTGGTGGTCTCGGTGC-A-CACGGACCGGAAGTCACCCTGGCCCAGGCAGGCCCCAG------TCAG-CAGAGCCGCTGACCTCTGGAAACTCCCCTCTGGTTCAAGC-CGTGGGTG------GACCTGCCCG----CGGGGCGGGTGCAGGTG-GC--------CCTG--GCTGAGCTCTCTCCTAGGTCCATGGTGGGCATGTTGG-GGAGCAGGGCCAAAGGGAGTCAGGGTGACGCTCAGGGAGGGTACCA-CCTGGCTCCGCAGCGGCACG-GGTCCAGCTCACG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
19 Chinchilla_lanigera-NW_004955486.1-164548_164849         87.0%  33.2%    ----------------------------G---------GGTGT--GGACTGGGCTGCCGATGTGGATACTCGTTGGCCCTTGTGGGAAGGCC-AGGCTGTGTGAT-TGGGTGCACTCTGCCCTGACCGCAGCCCCCAGCCCTGGGCTCTGGACACCTGCTTCCTGATGGGCAGCAGCGGCCAGCCTGGGGGGAAGACGCAAGAGTGTGGTCTTCGCA-GTGGCAGTGTGCAGTGAAGGTGCAGCAGATGGG-CTGGCGTCCTGGGTCCGGCCCTCCATCTGCACCGCTAATGAGCTGATGACGAAGCTTCCCAGTGCCTGGCACCTTCCCCTAGAGAGCCAGGCAGTGCCCTTTCCTGGAGCA--GGTGTGGGGTGCCGGGGG--GCTCTTGGAGG-CCAGAGCCTGGTAGCCCCGA-----------------------TATCAATGAGG----------CCACAGGGGAGGGTAGATGGGAGGGATGAGTAATCGGA-CATGCCTGTTCTTCCTGGGAATTTGCTTCCAG-CACAGGCACATGGGCTCCCATATGGCTGGACGGACTTCCTGTGTGGGATAGAGGGGCGGCTCCTGGGAAGTTGCCCTGGGCAGCACCTTGGGG---TGC---------AGGTCCCACACCAGCCAAGCAGTGGTGATGTTGGCCTTGCGTGGCCAATAGTTGCAGGGGAGCAGAGTGGG---CTCCA------GGGGGCTGG--------AGGCGCCTCCTGCTCTGGCCAGAGGAG-----CCAGGTGGCCCTGGGTGGTGGAAAAGCCCTGTCTGGCAGCAGGGCACTTTGTCACAGGGGACAGTCCCCTCAGCTTGCTCAGAAACAGCAGCCCAGGGACCCTGAGGAACTTGGGGCATTTCAACGTGAGGCTAGACTGTGCA-TCTTGCAGCTAGTACCCTGTTCCCTGCCGAAGCTGCTGACTGCTAGGGTCCAAC--CCACTGTGGCCAGCTGGGGTGGAGGGTGCCC---------------------AGCGCTCAGAGGTGGCCCAAG---CCACCCTGGTTCAGCACAATGTGTGGCCAGTGGG--GACGGAGT-------------GAGGAGAA-CCTCACCTGTCCCCCACAAGCTGGGACGCAGGGATGGTGTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------     
20 Bos_mutus-NW_005393029.1-163455_163828                   86.8%  37.6%    --------AGGGAAGATCCTGGTCCTTGGAG------GGGTGTGGGCTGTCAGCAGCGGGACCCACTGAGAGCTGCCCACCCTCCAT-GCCCCATCCTCTGGGCAGAGGGCTCGGCCAGCTC----AAGT--AGGG-G--------------GCATGCAGCATGGCCCTTC----T---------CTGCCCTTCTCTCCCTCCCAGGGAGAGAACAGCCTCAAACGTGCAGCCGAGGATGGAGCAGATGGC-TAGAGT--CTTGGGTCCAGCTTCCATCTGCACAGCTAATGAGCGGATGGCGGTGGTTTGGGGCTCCTGGAAA---------------GTCAGTGGCTCAGCCCCCCTCCAGGAAGTGTTCCTCTCCTGGGG-TGGGGGCGGGTGGTTGGGGGACTCGAGGCCCCTCCTGTGCCGAGCCCAGGCCGGCTCCACA---CACTGAGGGCTGTGGTGGGAGGGGCGTTGAGGAGGGGGATGAGTAATCGGAAACGTCTGTTTCTACCCGGGACTTCACTTTCTGCTCCGC-TATGTGGGCTCCCACCG-GCTGGACAGCCTTCCTGTGTGGTGCAGGCCAGTGGGCGTGGGCCTCCAGGTGGGACAGCCGGCTC--CCTCCCCAGGA-----------CAGGCTGCTT----C---CCCACTCCTGGG-AAGTGTGGGGAGAGG----AAGTGGGCCAGGGTTTC-----------------------CACCCCCGCCGGGCAGCCTGC-----ATGGAGGGGCCCAAGGTAGGGCCTTGTGCACC-GGCCGGTCAGCCAAGGGGAGAGGTGA-GCTGC--TCTGAGT---CCACCT--GCTCCCATTGCACCAGGGCCCCT-GGACCCCCCTCTAGCTCTGTGTCCCAAAGGCA---------GGGAACA-CAGGCGTGGTGGCCCAGGAAGTCTCCGAGCCATGAGGA---------------------------------------AGTCACCCC-CCACCAAGTCCCAG--GGGGTTTCCTCAGCCTGCTCAGATCCAGG-GACC-CA-CAGACAGCTTCGAGGTGA------------CTCAGGGTGGTCTCTA-TTTCACATTGAACAGGACCC-AGCCTGGCCCAGGCCTCGCCTGCCTCAGCCAAG----------CTC------------------------------------TGTTTCCTTCAGAAACTCCT----------------------CCTGGAGGTCAGAGCCATGTG-------------------------------------     
21 Panthera_tigris-NC_056667.1-175074_175404                87.6%  38.1%    -----------------CCTGGTCCTGGGAG-------GG-------GAGGAGGAAGGCAGCAGCAGGGCC---TGAGGCCCCTCGTGCCCCCATTGCCTGGGTC-AGGGTCTCAGCTGGCC----TCGAGGGGGA-GACATGTGGCCTGGCCCTTGTCTGCTGGGAGGAG----TGTGCTGCGCCCCTCCCCCCA---CACCCCGGGAGAGAACAGTCTCAAATGTGCAGCTGAGGACAGAGCAGATGGG-CTGGAGTCTTGGGTCCGGCCCCCCATCTGCACAGCTAATGAGCTGATGGCTTAGCTTCCAAGCTCCTGGCACCTTTCT--CCTGGAAAGCCGGGGGACGGGCAGGGCGTG--AGCGAGGGG-CGCAGAGGCCAGG---------------ACAGGGTGCGGGCGAG-----GGGCGCAGAGGCCAGCTCCATGCTCCTTGCAGGCTGTCGGGGGC--AGAGGCATCGAGGAGGGAGGAGTAATCGGAAGTGCCTG-TTTCTTCTGGGACTTTGCTCCCAGCACGGCTTACGTGGGCTTCTGCCG-GCTGGACAGACTTCCCGTGTGGAAAAGGCCCCTCGGGCAGGGTGACGG---------------ACACCCTTTCCAGGA-----------CGGGATGTTTTGTCC---GGC--TCTTGAGAGCTGG-----AGGGAGAGGACGCTGCCCGTCCCGAA-------------CGGGTCGGTGTGCCAGCCAGGGACAGCTGGCC----CTTGAAGACTCCAGGCTGGGGCCTCGGGTGCC-GGACGATCGGGTGAAGAGAGGAGGAA-GCTGTTCTCAGT-----CCCAGT--GACTCGTGTTGGTCCTGGGTTCA-CAGTGATC---------------------GGGCCCTGGCCCCGGTCAG-CTGAGCTGCTGACCTTTGGAAACTGCCTGTTGTTCAGGCCCCTGTGGTG------GCACTGACCA----TGGGCTGGGTGTGGGCG-GC--------CCCT--CCTGCACCCTCTCCCAGGTCCACGGTGGGCATGTGAG-GGGACGGAATCGAGGGAAATCAGGGTGACACTCAGGGAGGCCCCAT-CCCCAGCC----ACACGGGG-ACAAGA----TAGAGGGGACTTTAGGAAGTCAAGGTGGGAGAGCCC------------------------------------AGCTGCTTCCGGAGAGTCCT--------------------------------------------------------------------------------     
22 Mesocricetus_auratus-NW_024429219.1-161022_161533        83.2%  31.0%    -------------------GAGGTCCCAG---------GGCCCAGGGGACTGCACATACATGGGC-TTTTAGCT-GCCTGAGGGAAGAGTCCTGGTCTTAGGAGG-AGAGGGCTAGCAGCAG----GAGGGCCCCAAGCCC-ACCT-----------------C---CATCATCCAGCGACCCCGGGGGAGAGATGTACGACAGCAGAGTCCTTGTAGTTGCAGCGTGTAGCTGAGGAAGAAGCAGATGGG-CTGCTGTCCTGGCTTTGGCCCTCCATCTGCGCCACTAATGAGCCGATGACGAAGGCTCCCTGGCTCCTGGCACCTTCCCTGGAAAGTGAGGAAGCCTTTGCCCAGGAAGGT--GCCCCCTCTCTCTGGGCA--GGTGTGGGTACAGAGCCCTGTCCTGGGCCAGA------CAGAGCTTGTGGCTCCACCTCAGAGGGAGTTGGTAAGGGGAGGGGGGCTGGGTAGAAGAATGAGTAATCAGAGGAGCGAGCCTGCTTATCCCCGGGAGCTTGCTTTCAGCACAGAGTACGTGGGCTCATGGCCGGCTGGACAGACTTCCTGTGTGGGGAAGAGAAGGGGCAGGGTGGGGGAAGTGAGCACCAGCCCCAGGATTGGGTTGTTTTCTTGGATTTCTGGGAATTTACCTCCTG-GACAC----------AGGAGCCCTCTGCTAGGTAGGTGACGGGTCTCTGAGCTGTGGTGGATAGCCACAGG-TGAGTGAGGTAAGCTGCTGGGA---------TAGCTCACAGGGCTAGCCTTGGGATCAGGAACAATCGA--------------------------------------------------------GAGCATG----------GAGCCTTGACTT-GGAAGCAGCTGGCCAG---CCAGTCCTG--GG-----AGTCGGCCCTTAGCCTGCTAAGACTCAGCAGCCCAGTGTCCCCAGAGGGCCTGGAGGTATCTGGACACAAGGCTGGTCAGGTCACAGCC------CTATATGTATCATCCATGGCTCTAT-----TTCCTGCTGAAGCCCTTCAAGCCTCTGGCTTCTGGTCCCGTT-------------GCTGAGAT-GACTTAGATT--TTGGCAGCCCAT---------TTCTCAGATGCGG---CTCATGCTGTTTTGGGTT--------ACCATGGGTGATGGAGCAGCAC-------------------------------------------------------------------------------------------------     
23 Hyaena_hyaena-NW_024080942.1-174946_175254               89.9%  40.1%    ---------------GCCCTGGTCCTAGGAG-------GGGAGAGGGGGACAGCCCCAGGACCTGATGTGA---GCCCACCCTTCGTGCCCCCATTGCCTGGGTC-AGGGTCTCAGCCAGCC----TCGAAGGGGA-GACACGTGGCCTGGCCCTTGTCTGCTGGGATGAG----TGTGCTGCTCCCCTCCCCCCAG-CCACCCCGGGAGAGAACAGTCTCAAATGTGCAGCTGAGGACGGAGCAGATGGG-CTGGAGTCTTGAGTCCGGCCCTCCATCTGCACAGCTAATGAGCTGAGGCCATGGCTTCCAAGCTCTTGGCACCTTTCT--CCTGGAAAGCCGGGGTGGGGGGGGCGGGGA--GGGCGCGAG----------------------------------------TGAGG-----GGGTGCAGGGGCCAGGTCCGTGCTCCTTGCGGGCTGTTGGGGGGTAGAGGCATCAAGGAGGGGATGAGTAATCAGAAGTGCCTG-TTTCTTCTGGGACTTTGCTTCCAGCACAGCTTACGTGGGCTTCCGCTG-GCTGGACAGACTTCCTGTGTGGGAAAGGCCCCTCGGGCAGGGTGATGG---------------ACACTCTTTCCTGGA-----------TGGAATGTTGTGTCT---AGC--TCTTGAAAGCTGG-----AGGGAGAGGGAGCTGCCCACCTGGACAGCCCCC---AAACGGGCTTGCACACCAGCCGGGGGAAGCATGCC----CTTGAAGACCCCAGGCTGGGGCCTCGGGTGCT-AGATGGTTGGGTGAAGAGAGGAGGAA-GCTGTTTTCAGAGT---CCAAGT--AACTCATGGTGGTCTTGGGTTCA-CAGTGATCGAAAGTCATCCTGGCTCTGGCAGGCCCCAGCCCCGGCCAG-CTGAGCTGCTGACCTTTGGGAACTCCCTGTTGTTCAGGCCCCTGTGGTG------GTGCTGACCA----AGGACCGGGTGTGGGCG-GC--------CCCT--GGTAAGCCCCCTCCCGGGTCCATGGTGGGCATGTGGG-GGGATGGCACTGAGGGAAGTCAGGGTGATGCTCAGGGAGGGCCTCC-CCCCACCAGCCACACAGGAG-ACAAGA----TAGAGGGGACTTTAGGAAGTCAAGCTGGGA----------------------------------------------------------------------------------------------------------------------------------------------     
24 Peromyscus_leucopus-NC_051064.1-162244_162742            83.9%  31.5%    ------------TAGCCTTGAGGCACCAG---------GGTCCAGGGGACTGGACATACATGGGGTTTTCAGCT-GCTCAAGGGAAGAGCCCTGGTCTTAGGAGG-AGGGAGGTGGCAGCAG----GAGGACTCCAAGCCC-ACCC-----------------C---CATCTTCTGGTGACCTC--AGGAGAGATGTACAACAGCAGAGTCCTTGCAGTTTCAACATGCAGCTGAGGAAGGAGCAGAT-GG-CTGCTGTCCTGGCTCTGGCCCTCCATCTGCACCACTAATGAGCTGATGACGAAGATTCCCTAGCTCTTGGCACCGTCCCTGGAGAGTGAGAATGCCCCTGCCCAAGAAAGT--GCCCCCTATCTCTGGGCA--GATGTGGGTACAGGGGCTCGTCCTGGGCCAGG------GCTTG----TAGCTCCACCTCAAA---------GAGGTGGGGGAGGGCTGGGTAGAAAAATGAGTAATCAGAGGAGTGAGCTTGCTTATTCCTGGGAGTTTGCTTTCAGCACAGAGTACGTGGGCACATGGCCGGCTGGACAGACTTCCTGTGTGGGGAAGAGAAGGGGCAGAGTGGGGGAGGTGAGCACCAGCCCCGGGATTGGGTGT-TTTCTTTGATTTCTGGGAAGTCACCTTCTG-GGTAC----------AGGAGCCCTTTACCAGCTGGGTGA--TATTGATGAGCTGTGGTGGACAGCCACAGG-TGAGTGAGGTAAGCTTCTGGGA---------TAGCTCAAGGGGCTAGCCTTGGGATCCCTTCCAGCCCTCCC-------------------------------CAAGAAAGAAGCCTTCAGGTATGAGGGTG----------TAGCCCTGACTT-GGAAGCAACTGGCCAA---TCGGCCCTG--GG-----AGGCCGTCCTCAGCCTGCTAAGACTCAGCAGCCCAGGCC-CCCAGAGGGCCTGAGGGCATCTAGACTCCAGGCTGGTCAGGCCACAGCC----------CTGTATCATCCATGGCTCCAT-----GTCCTGCTGAAGCTCCTCAGGTCTCTAGCTTCTAGACCTGGG-------------GTTGAGAT-GACTTAGGTT--TTGACAGCCCAG---------TTCTCAGATGCAG---CTCATGCTGTTTTGGGTT--------ACCAGGGATGAC-----------------------------------------------------------------------------------------------------------     
25 Octodon_degus-NW_004524689.1-167230_167533               84.7%  30.7%    -------------------CAGCAAATAG---------GGTGT--GGACAGGGCCGCCAGTGTGGACACTCGTTGGCCCCTGTGATTAGGAC-AGGCTGTGTGAT-TGGGTGCGTCCTGCCCTGACCAGAGCTCCCAGCCCTGTGCTCCGGACTCCTGCTTCTTGCTGGGCAGCAGGGGCTGCCCTCGGGGGGATACACG------AGGTCCTTGCA-GTCACAGTGTGTAGGGAGGATACAGCAGATGGG-CCGGCGTCCTGGGTCCGGCCCTCCATCTGCACCGCTAATGAGCTGATGACGAAGTTTCCCAGTGCCTGGCACCTTCTCCTGGAGAGTGAGGCAGTGCCCTTTCCCAGAGCA--AGTGTGGGGTGCAGGGAG--CCTCTTGGGGGGCCAGAGTCTGGCAGCCCCGA-----------------------TATCAATGAGG----------CTGCTGGGGTGGATGGGA----GGGATGAGTAATCGGT-G-TGCCTGTTCTTCTCTGGAGTTTGCTAG--C-GTAGTGCACATGGGCTCCCAGCCGGATGGACGGACTTCCTGTGTGGGAGAGAAGGGCTCCTG---GGAAGTTGCCC-CGGGAGCGTCTGGGGC---TGC---------TGGACCCACAC-TGGCCAGGCATGGTGATGCTGGCCTTACACGGCCAGTGGTCGCAGGGAAACAGAGGGGG---CTTCT------GGGGACCAG--------GCCTCCCTTTCCAC---------------------------CCTGAGTTGTGGGACAAG--GTGCCTTGCTGCCAGACAGTTGTCACGGGTGATGGCCCCCTCGCCCTGCTCAGAAGCAGGGGCCAGGGACCCCTGAGGAACTTGGGGTACCTCAGCTTGAGGCAAGACTGTGTTATACTGCAGCCTGTGCTCCGTTCCCTCCTGAAGCTGCTGACCCCTGGGGCCGAGC--CCACCATGGCCGCCTGGG-GTGGGGGCACCC---------------------AGCACTCAGAGGTGGCCTGAG---CCACCCTGGTTCAGTGCAGCGTGTGGCCAGCAGG--GACAGAGC-------------GAGAAGAA-CCTCACCTGTCCCCCACAGGCTGTGATATGGAGATGGGACAGCCAGCTGACCGTCAGA------------------GCTGGAGTGAGCAAGTG-----------------------------------------------------------------------------------------------------     
   clustal                                                                                                                                                                                                                                                                                                .          ... .   ******* *             .       *  *** ***  *..   *:...* .. *     *              *  .                                                                                                                                                                  . .*  *.                       .*.    .                 .***           .. **. .* * *** .*  *    .*.