Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%

                                                               cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .     ] 1416
 1 Target                                                   100.0% 100.0%    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTTTTCCTCA-CCAAGTCTGGCTGGACGCTGGGTGGCTGGTAGTACTG----------CCC--AGCCACCCCCGTGGCCAGTGCTGGCCTCATCTCCAAGCAGTGCCATCTCTAAGGTCAAC-----------------TCTGATATGGGGGTC-CCACCAGCAGTCACCTCCACAGAGCGC----TGTCACTGTGTCCCCGC--CA---G-------------GGCCAGGG-------TGGGGGGCTGCAGAGATGG---GAGGGTCCTGTG-------------------------AGGTG-TTGGGCTCGGGGGCGCCG-ATCTCCTCTCCTCTGGACACTGCTCTGGGGCCGCTG------CTGTGAGGCAGGGAAGGCCGTTGCTTCCAGAGGGGCCATGCA--TGGGGAGATAATTGTGCAG-CGTGCTC--CTGGCCACGCGGCCAACCATTTTAGAAACTCCTGAGGCAGCAGCACTCTTCCTGCCTGGGATGTGCGGCACACG--CCTCTGTGTGGCCCACG-TGATGG-CAAAGGCAGCTCCACGGTGCTCCTGGCTTT--GTGCCCACTCCAACCTGGCAC-CAG---GGGCGTCTG-ACACCCAAGTCCCAGACCCTGTC--CT-CAAGGATTCCAAGTTCATCAGGGGCA--CCCGGGGGGCTGCACTGGCAGGG--------AA-GGGCGTCCAACCCAGCTCAGAGGCTGCCCTGA--AGTCTGC--CC--CTGGCCCTGCCATCTCCTGAGGCACATGGTGGCC-AGTGG--TGGGACT-CCAGACCCTGTGCCGCCTGCTGGC-------GCACTGACCTCCCAG-----GCCACAGGGCCAGAAGCCGCACAGGCT-----CTGCTGG-GGGCCGCTGGGCAGACTCGTGCTGCTGGAGGAGTCGGGT-GGGCCTGGGTTCCCGTCCTGCCTGTGGCTGCCTGCAGGCCCTGAGGT--GAATCAC------ACGCCTTCCCTGAGCCTGGGGTGGGCAGAGTGCTGTGACCCTGGGGGTTGTCATTGCCACTACTCGCAGGGCTCGGGACAGATGCCAACAGGCCGGCCTCTGGCTCCTGCAGGCATCCACCAATCGAAAGCGTGTAGAAAACACTGCTAAGAGGAAACTGGATTCCCTCATC----------------------------------------------     
 2 Rhinopithecus_roxellana-NC_044560.1-208783_209740         97.3%  83.1%    -------------------------------------------------------------------------------------------------AGT------------C--------------------------------------------------------------------------------TG-----GCCGGACGCTGAGTGGCTG-GTAGTCCTGGCCGGACGCTGAGTGGCTGGTAGTCCTG----------CCC--AGCCACCCCCGTGGCCAGTGCTGGCCTCATCTCCAAGCAGTGCCATCTCTAAGGTCAAC-----------------TCTGATGTGGGGTTC-CCACCAGCAGCA-CCTCCACAAAGTGC----TGTCACCGTGTCCCCAC--CA---G-------------GGCCCGGG-------CAGGGGGCTGCGGAGTCAGGAGCCCCTGACTGTG-------------------------AGGTG-CTGGGCTCGGGGGCACCG-ATTTCCTCTCCTCTGGACACTGCTCTGGGGCTGCCG------CTGCGAGGCAGTGAAGGCCGTTGCCCCCAGAGGGGCCACGCA--TGGGAAGATGATTGTGTGG-CGTGCTC--CTGGTCACGCGGCCAACCATTTTAGAAAGTCCTGAGGCAGCAGCACTCTTCCTGCCTGGGATGTGCAGCGCACG--CCTCTGTGTGGCCTGTG-TGATGG-CAAAGCCAGCTCCACGGTGCTCCTGGCTCT--GTGCCCACTCCAACCTGGCAC-CAG---GGGCAGATG-ACACCCAAGGCCCGGGCCCTGCC--CT-CAAGGATTCCAAGTTCATCAGGGGCA--CCCGAGGGGCTGCACTGGCAGGG--------AA-GGGCATCCAGCCCAGCTCAGAGGCCACCCTGA--AGTTTGC--CC--CTGGCCCTGCCATCTTCTGAGGCACATGGCGGCC-AGTGG--TGGGACT-CCAGACCCTGTGCTGCCTGCTGGC-------GCACTGACCTCTCAG-----GCCACAGGGTCACACACACATTCT-------------------GCTGAGGGCAGCCTTGTGCTGCTGGAGGAGTCAGCT-GGGCCTGGGTTCCTGTCCTGCCTGTGGCTGCCTGCAGGCCCCGAAGT--GACTCAC------GC--CTTCCGTGAGCCTGGGGT-----------GGGCAGAGTGCAGGTTGTCACTGCCACTGCTCACAGGGCTGGGGACAGATGCCAACAGGCCGGCCTCTGGCTCCTGCAGGCATCCACCAATAGAAAGCGTGTAGAAAACATTGCTAAGAGGAAACTGGATTCCCTCATCAAGGAGTCGAAG----------------------------------     
 3 Aotus_nancymaae-NW_018508829.1-116384_117311              98.5%  79.4%    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTCCCGCCGGCACCTG-GCACGCCCAGCTTTCTGGTCTTTTTTCCACGAAATCC----------GGC--CGGAGGCTGGGTGACCAGTGCTGGGCTCACCTCCAAGCAGTGCCATCTCTAAGGCTGGC-----------------CCTGATGTGTGGATC-CCGGCAGCAGTCACCCCCACCGAGCAC----TGTCACTGTGTCCCCGC--CA---G-------------GGCCGGGG-------CGGGGGCTGCGC----AGTCGGGAGGGTCCCGTG-------------------------CAGTG-CTGGGCTTGGGGTGCTGC-ACCTCCTCTCCCCCAGGCACTGGTCTGGGGCTGCTG------CGGTGAGGTGGTGAAGGCTGTTTCTCCCAGAGGGGCCGGGCA--TGGGAAGATGACTGAGCTGCTTTGCTC--CGGGCCACGTGGCCAACCATTTTAGAAAGTCCTGAGGCAGCAGCACTCTTCCTGCCTGGGGTGTGCATCTCT---------GTGTGGCCCACG-TGATGGCAAAAACCAGCTCCATGGTGCTCCCAGCTTC--ATGCCCACTCCAACCTGGCAC-C-G---GGGCATCTG-ACCCCCAAGGCCCAGGCCCTGCC--CT-CAAGGGTTCCAAGTTCATCAGGGCCA--CCC-AAGGGCTGCACTGGCAGGG--------AA-GGGCACCCAGTCCCGCTTGGAGGCTGGCGTGA--AGTCCGC--CT--CTGGCCCTGCCATCTCCTGAGGCACATGGCGGCC-AGTGG--TGAGACT-CCAGACCCTGTGCCGCCTGCTGGC-------ATGCTGACCTCCCAG-----GCCACAGGGTCAGAGGCCACACAGGCT-----CTGCTGG-GAGCCCGTGGACAGCCTCATGCTGCTGGTGGAATCAGGT-GGGCCTGGGTTCCCGTCCTGCCAGTGGCTGCCTGCAGGCCC-AAGGT--GAATCAC------ATGACTCCCATGAGCCTGGGGTGGGTGGAGTGCTGTGACCCTGGGGGTCATCACCACCACTGCTCACAGGGCTGGGGGCAGATGCCAACAGGCCGGCCTCTGGCTCC-GCAGGCGTCCACCAATCGAAAGCGTGTGGAAAACATTGCTAAGAGGAAACTGGATTCCCTCATCAAGGA-----------------------------------------     
 4 Otolemur_garnettii-NW_003852462.1-179986_180393           81.1%  39.2%    -------------------------------------CAGGAGGAGCCCTGGAGGACGGCAGCTTGGGCTCCACACATTC------CCACCCCACCTACTCCAC--C--------TGTGCATTGGCAA--TTTCCCATCTTCTAGACT-----------------------CCTTTCCAACTGACCCCCCAGGCTACCCTGGCCCCTTCCTGCCCAGCA-CCAGCTCTACCTCCAA---------------------------------------------------------------------------------------------------------------------------GGTC-AACCCTACAGCCACCTGCATAGGGCAA----TGTCACCACGTCCTCACTGTAGCTG----------------------------GCTTGGCCTTG-----GGGGCTGGGAGCTGGGTA------GC-CGATGAGGGCTTTGGGGGACA-AGGGATTCTGCATTCAGC-AACTTCCCTCCTCAGGGCGTGGCTCAGAAGTGGCAG-----------------GGACCTTATTTCTTCCTGAGGGCCATCCAT-----GCAGGAGTACTGGGCAGGAACATTCTAGGCCACAGGCT-----GTCTGCTTAGAAAGCCTGAGGCAGCAGAATTCCTC-CCATGAGGGAGCCTGCA---TG--TCTCTGCGAGGCCCCGCATGATGGTGAATGCACAT---TTGATGATGTCCAGCTT--GTGTTCACTCCACCCTGGGCA-CTCCACTGTTGTCTGGATGCCAAAGGCCTAGGTCCCATG--CCA---GGGGTCCAGGTTCATCAGGGGCAC---ACAGGG-----------------------AA-GGGCAGCT-GCCCAGCCTGGAGGCTGCCCTGA--AGCCTGC---------CCCCTGTCATCCCTTGAGGCACATGGTGGCC-AGTGG--CGGGATC-TCAGGACCTGTGCTGCC---------------CACTGATCTCTGTCCC--TGAGACCCATTGGGCCAGGCACCATGTA---AGCTGTTTGCTGGGTCCCCGTGGGCAGCACTGTGTTGCTGGAAGTG--T-AATGTGGACCTGG------GTTCAAAGCTGCCTGTAGCCCAAGGAGA--ATCTCATGCCCCTGGG-------------AGAGGACAGGGTCGTGCAGAGGACCCGTGGGTGGTCACTGCTGCTGCTTACAGGGTTGCAGA-TGGATGCCAATGGGACGGCCTCTGTTCTTACAGGCCTCCACCAATCGGAAGCGTGTAGAAAACATTGCTAAGAGGAAATTGGACTCCCTAATCAAGGAGTCAAAG----------------------------------     
 5 Tupaia_chinensis-NW_006198262.1-195015_195470             85.1%  38.9%    -----------------------------------------------------------------------------------------------------------------------------------------------------------------GGACCCTA--GG--------TGGCCAGTGGTCCAGTCCAGCTACCCTCACGCCCAACA-CCAGCCCTATACTCCA-------------------AA-----------CA--GCACCAACTCTAGGGTCGA-GCCTC--------------------------------------------------------------CAGT-CCTGCAATGGCCACCTCCACAGAGCCC----TGTCACCTCCTCCTCACTGCGTCTAGTTGAGCAGCCTGGGCTGGGGGCTGTGGGGAGAGACTGAGAAGTCATGGAGGGCTTCCCACAGCTGCGGGC-------------------TT-GGGGATTCTGTAATTAGC-ATCTGTTCTCCTCTGGGTGCTGCTCTAAGCTG-----CTGCACAAGGCAGTGAAGGCTTTATTTCTCCCTGAGGGGCCATTGGA--CGGGAAAATAATTGTGCAGGAGCATTCCTGGCCATGTCAGGCTAATTGTTTTAGAAAAGCCTGAGACAGCGGAATTTTTCCCTGCTTCGGGCGTGCCTGCGCACTTCTCTGTCTGGCCCCAGGTGGTGGTAAACCTGCTT---TCTGCGATGTCTACTTT--GTGCCCACTTCAACCCAGGCA-TCAGCGGTA---------TCAGATGCCCTAGGCCCCCCT--TT--GAAGGGTCCATGTTTATCAGGGCCAT---ACTGGGTGCTGCTGGTGCAGG--------AA-GGGTGCTGGACTCAGCCAGAG-GCTACCCTGA--AGCCTGACCCC--T-----GCCCATTTCCTCAAGACATATGGCTGCC-AGGAA--TGAGCCC-CT-GATCCTGTGCTGCCTGCAG-------GCACACTGACCTCCTTCCC--TTAGGCCCACTGAG-------------------TCACCTGTGGGCCTCGTGGGCAGCATCATGCCTTGTGAAA--GGGAT-GGGGTTGGGGGTG-----------------------------GGGGG--CTGGCATCAAATCCTG--TTTCTCGTT------GTCTTAAGGCCCAGGCAGACCACACGCCTTCTGGGTGCCCAGGGATGGGCAGTGTGGGGCAATGCCCACTGGTCAGCCTCTGGCTCTTGCAGGCCTCTACCAATAGGAAGCGAGTAGAAAACATCGCTAAGCGGAAGCTGGATTCCTTAATCAAGGAGTCGAAGATCCGGGACTGTGAAGACCCCAATGACTTTACTG     
 6 Castor_canadensis-NW_017871110.1-178306_179077            91.8%  48.0%    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAACACCATCCCTGCTTCTAA-GCAACACCAACTCCAA-------GGCT-GTCTTTATG-----------CT--GAGACCTCCTGAAGGAGGA-GCCTGCCTAGCTC------------------------------------------------TGTGAGGGTC-CCACTAGTGGTCACCTCCAGAGTGCCC------TCATGTCCTCCTCAGTGCAGCTG-GCCCTGCCTCTGGGCTAGGGGCTGCAGAGGGAGACTGAGGAGTCTGCCAGGGCCTTGGCTCACAGAGGCCGGGGG----------------------CTCTTTAATTGGC-ATCTTCTCTCCTCTGGGCACTGCTCTGAGCTG-TTGCTGCTTCAAGGCATCAAAGATTGTATTTCTCCCCCAGGGGCCATTGGA--TGAGAAAATAACTGTGCAAGAGGCTTCCTGGCCTGGGCTAGCTAATTGCTTCAGAAGGCCCCGAGGCGGTGGAATTCTTCCTGCTTTGGGTGTG--CCTGCCGTGTCTCTGGTG-ACCCAGAGTGGTGTTAAAAC-CATC---ATTGTGATGTTTACATA--GTGTCCACTCCTACCTGAGCA-CCA-GGGATGTTCTA-GTGCCCAAAACCCAGGTCTTTCT--TC--AAGGACTCCAAGTGCAGCAGGGTTAC---ACTAGGGCTGCCTTGCCAGGG--------AA-CGGTACCTTGGCCAGTTTGAAGGCTCCTCCAA--AATCAGCCCCT--C-T-CCCTCCATCACCTCAAGGTGCGTGATGGCC-AGTGT--GATGCTT-CAAATCCTGTTGCATGC----------------CCTGACCTCCTCCAG--TGAGGCCCACCAGGCTGGGCGCTTGCATGTGAGCTGTCTGCTGGGTCCCCAGGCAGAGTCATGCGTGGAAGGAATTAGGC-AAGCCTGACTCTGCGTTCTGCCCTCAGCTGCCTGCAGGCATCCCTGG--GGTGAATCACAGCCTC--TGTGAGCTCCCGAGTGGTAGTGTGTGCTCAGGGTCCCCTGGGCCATCACCACTGCTGCTCACAGGGCTGGGGACAGGTGCTG--ATGGCTGCCTCTGGCTCTTGCAGGCCTCCACCAATCGGAAGCGTGTGGAAAACATCGCTAAGAAGAAGCTGGATTCTCTA-------------------------------------------------     
 7 Carlito_syrichta-NW_007256000.1-147680_147786             92.1%  48.1%    ---------------------------------------------------------------------------------------CCCCTCAGCAAGTGGGGACAGCACTG--------------------------------------------------------------------------------GGGGCCTGCCACCCCGGGTATCATTC-CCTCCCGTG-CCTGCACCTGCTTGGGCTCTGACGCAGGACTCCTGGCTTT--CTGCCACCCTGGGACCAGCACCAGCTCCACCTCTAAGCAGTGCCAAGCCTG------------------------------AGACGGATTC-CCACCAGGGGTCACCTCCACAGAGCAC----TGTCACCTTGTGCTCGC--TG---C-------------AGCCGGCC-------CCGGGGCCAGGGGCTGTGACTGAGGCTGAGGGTGG-----GCGAGGGCTCAGGTAGTGCCAGAC-TTGGGTCCTGCAGGGAGC-ACCTTCTCTCCTCTGGGCGCTGCTCAGGGTGAGACT------GAGGCAGCAGATGCTGGATTCTTCC-CTGAGGGGCCGTTGGC--TGGGAAGGTGACTGTGTGGCGTTCTTG--GCT--------GCCAGCTAATTGCTGTAGTGAAGTGGAGGCCACAGGGCTTCTCCACCCT---GTGCCCGCACG--TCTCAGTCTGGCCCAAGGTGACCGCGAGCCCATGCTCTGTGATGGCA----GTGT--GTGCGCAGTCCGC-CAGGCAC-GCG---GGAGGCCTG-CATGCCCAAGGCCAGGCCTTGCT--CT-TGAGGTGCCTGCCTGCATCCACCTGGGCCACCCTGGGCTGTGCCGGCAGGA--------AG----GGCACTGGCCTGGCCTGAGGCTGCCCTGA--AACCTGTCCCC--TGACCCTTGCCCTCTCCTTAGATGCGA-GGTGGC-TGGAG--TGGGATG-CCAGGGCTTGTGCTGCCTGCAGGT-------GCACTGGCCTCACGC-----CACGGCCCCTGGACCAGACACCCTGTG-----TCCACTG-GCCCCCTTGGGTGGC--ACCATGCCCCCAAGGCTCAGAT-AGGCCTGGGGTCAAGTCCGACTTGTGGCTGCCTGTGGGTCCCAAG--------------------------------------------------GCAAACCACGTGCCTCTGTGAGCCCGGGGAGGGCAGGGCTGGGGACAGAGGCCAACTAGCCGGCCTCTGGCTCCTGCAGGCCTCCACCAACCGGAAGCGTGTGGAAAACATTGCTAAGAGGAAGTTGGACTGCCTCATC----------------------------------------------     
 8 Ceratotherium_simum-NW_004454172.1-194904_195035          89.5%  34.5%    ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCTTGGG-GCTGGGGGCTGCACAGGGGGGCTGAGGAGTCAGGAAGGGCTTGG-TGCAG---------------CT--GG-GCTGGGGGGACTGTAATTCGCGTCCTCTCTCCTCTGGGC---------------GCTGCTCTAAGCCACTG-CTGTG---AGGCAACGAAGGCCTTATT----TCTCCCCAAAGGG---------------CCATTGGCTGGGAGAGTCCTGGTGCAGGAGCTTC--CTG-GCCACTGGCTAATTGTTTTA-----GAAAGCCCTGAGGCAGCGGAGTTCCTTCCGCTTCGGGGCCAGTG-CATTTCTGCCTCTGGCCCGAGGTGACCGTAAACCC-ACATTCTGTGATGTGTACCTTGCACCCACTCCAATCTGGGCCAG-----GGGCACCCAGACACCTAGGGCCTAGGCCCTGCCCTGGAGGGGTCCAAGTTCATTCTGGTCACACTGGGG-C---TGCCCGGGGCAGGGA-GGGCTCCTGGAGGCTACCCTGACCAGCTCCTGGCACCAGCTAGCC-AGGC-AGTCTGTCCCTGCCCTGCC-------CATCTCTTTGAGGCAC-GTGATGGGGGTAGAG-GGATCCCAGATCCCAAGGTGC----TGAGTGTCTCTCGGAGCCCAGAAAGGCCTC--CAGGAGCACTGATCTCCTCCTCCGAGGCCCACTGGGCCGGGCGCCCGGTGAGC--------------CGTCTGCCGGG-TCCCCATGGGCAGCATTGCGCAGCTGAA-GGAAGCAGCTGT--TAGAATCAGATGGGCCTGGGTTCAGGG-CCGC----TCATCACTGTCTGCGGCCCCCGGGCAAATCGCATGCCTGCCATGTGCCCCGGGAGCGGGCAGTTGGGCGTG--GGACAAGCGAGGTGGTGTAGGAGTGAGGGTGCCACGTGCACTG------GGTGTGAGAGGCCAAGATGGGA----CA---------GGCCG------------------GGCCCTGGGCCCCACCCAAGACCCTGGGGGCCGCCACCGCCACTGCCTC-AGGGCTGGGGACAGATGCTAA---GGGGCCGTCCGGCTCTTGCAGGCCTCTACCAATCGGAAGCGCGTGGAAAACATCGCCAAGAGGAAACTGGATTCCCTAATCAA--------------------------------------------     
 9 Galeopterus_variegatus-NW_007727608.1-247787_247951       76.3%  32.7%    -----------------------------TCCCGTTTCTGAGCCGACC--TGGGGTGCCGTCCATTCCCTGTGCCTGGTCCTCTTGACCCCTCAGCAAGCGAGGGCAGCAC----TGGGGGACAGGGGTCCACCCTGGGTTCCATGCCATTCCCATCTGCACCTGTGCC--TGCTGGGCTCTGACCCAG-AACATTCCAGCTTCCTGGCCTCTTTCCTG-CCAAAACCAGTTGGACAGTAGGTGGCCAGTGGTCCTG-----------CT--CAGCCACCTGGTGCCCAGGACCAGCCCCACCTCCAAGCAGCATCAACCGCCAGGTCAACCCTGATGTT--GAGAACTCCAGTAGAAAGGGC-CTGCCTGGC-CCTGCGGGGGTCCTGCC----AGTGGTCACCTCCTCACTGTGGCTG----------------------------GCCAGCTGCTG-----GGGATGGGGGCTGTGGAG--GGAAGCTAAGGGGTCAGGGAGGGGCTTG-GGGGTCTCCATAATTAGC-AT-CTCTCTCCTCTGGGCGCTCTCTGAGCTGCTGCTGCCGCAGGAGGCAGCGAAGACCTTATTTCTTCCCGAGGGCCCAGTGGC--TGGGAAAATAATCGTGCGGGAGCATTCCCAGCCACAGCTGGCTAATTGTTTTAGAAAGCCCTTAGGCAGCAGAATTCTCCCCATGCTGGGTGTGCCTG---CGCACTTCCCTGCCGCCCGAGGTGATGGGAAACCCACAT---TCTGCGATGTCCATTTT--GTGCCCACTCTAGCCTGGGCA-CCACTGGTGTC--CG-ATGGCCAAGACCCATGCCCCGCC--CTA---------GAGGGCCATGCGGGGCTG---GG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGCAGGAAAGGGCAGCTCTGAGA-------TTTG--T-CCCCTGGCCCCTG------CCCACCTCCTTGAGGTGTGTGGTGGCCA--GTCGCAGGCTTCCTATGAGCCGGGGA---GTGGGCAGGGTGGGTGTGAGCGCTCTGGGGCCTGGCATGGCTGCTGCTCGCAGGGCTGGGGA--CAGATGCAAGGGCTCACCTCTGCCTTGTACAGGCCTCCACCAACCGGAAGCATGTGGAAAGCATCGCTAAGAGGAAGCTGGATTCCCTCAT-----------------------------------------------     
10 Marmota_monax-NW_025724459.1-181029_181506                93.5%  47.5%    -----------------------------------------------------------------------------------------------CAGGTGGGT------------------------------------------------------------------------------------------------GC----CGA---------G-TCCTGCCGAGCTGGACTCTGGGTGGCCAGCGGTCCTG----------CTC--CACCTCCCCCATGCCCAGAAC-TGGCCCCACTCCAAGCAGTGCCAACCCCAGGGCCAAGAGCTCCTGCAAGACAAGCCCGCTGGCCCGGTGGGTCCTGCTGTGACCCTCCACAGAGCGC----TCTGCACCTCTTTCTGCAGCC---G-------------GCCTGGCC-------GCTTGGCCTGGGAGTTGCAGAGGGAGCTCGGGTCT-----TTGGGGACCGTGGCTGTGCAAGGC-TGGGGCTCCGTAACCGGC-GCCTCTCCTCTTCTGTGCCTGGCTCCAGCTGCGGTG------GCTGTGAG-GCAGCAGGACTACTCTCCCCCA-GGGCTATTGG--AGGGAAGATGTTGTACAGGAGGCTTCC--CGGCCTGGGCGGCTAATTGTCTTAGGAAGCCCCGAGGCAGCAGAATCCATCCCACTCTGG---GCAAGCCTGCG--TGTCTGCCTGGCCCCAGGGGTGCACACCACGATGG--------TGTGTCCACTTA--GTGCCCACTCCAG---------------------------------------CAGGGCTCC--CT-CGAGGGGTCCAAGGGCATCAGGTCATG----CTGGGGGTGCCCTGGTAGGG--------AA-AGGC-ACCTGACCAACCTGGAAGCTCCTCTGA--ATTCCACCCCT--TGCCCCCTGTCCACCTCCTCAAGTTTGGTGGAAC-CTGTG--TGGGCTT-CTAGATCCTGTGTTGCCCACCAGGT------GCCCTGACCTGCTCCCC--TGAGGCCCACTGGACGGGGCA-CCAGGA-----GCGCCTG-CGGCATCCCCAGGGCAGTCTGTACCCTGAGGAATCAGAT-GGACTTGGGTCCAAGTTCTGCCCACTGCTGTTTGCAGACGGGCCCCA--GTCAGAC------AA--ATCA-CAGCCTTTGTGAGCTGTGTAATGGGGGGGGTGCTGGGGCTGTCACCTGCTGCTGCTTGCTGGGCTGGGGATGACACCGAGGGGCCGGCCTCTGGCTCTTGCAGGCCTCCACCAATCGGAAGCGTGTGGAAAACATCGCTAAGAGGAAACTGGACTCTCTGATC----------------------------------------------     
11 Propithecus_coquereli-NW_012152752.1-182668_182778        76.4%  33.8%    ------------TGGTGGCCTGTGTCGGTTCCCATTTCTGAGCTGACTCTTGGGGTGCTGTCCGTCGGCGCTGCCCAGTCCTCTTGGCTCCTCAGCAGGGGCAGCCC--------TGGTGGATGGCGG--CCCCCAGGGTTCCATACCATTCCCACCCCCGCCCATACCGCTGGCCGGTCCTGGCCACCCCCGTCCCCCAGCACCCACCCTCCTCCAAG-GCCAGCCCTGATGAGG---------------------------------------------------------------------------------------------------------------------------GGTC-CCGCCTGTGGTCACCTGCACAGAGGGC----TGTCACCACATTCTCAGGGCAGCTG----------------------------GCTTGGCCGCA-----GGGGCTGGGGCTGGGAAG------AC-AGG-GAGGGCCTCAGGGACTC-GGGGACTCCGCAATCAGC-GTCTTCTCGCCTCTGGGCGCTGTTCCGAGCCTCTGCTGCT-GCAAGGCAGCGAAGACTTTGCTTCT-CCCCGGGGGCCGTGCGA--TGGGAGAATGACTGGGCAGGAGCTTCCC-GGCCACAGCTGGGTCCTTGCTTTCGAAAGCCCCAAGGCAGCAGCGTTCTCCCAGCTGCGGGT--GGCCG---CG--TCTCCAGCAGGTCCAGGGTGACGGTGAACC-ACGT---TCTGCGACGTCCACCGT--GCGCCCGCTCTGCCCTTGC----TCCGGGGTTGTCCGGATGCCCAGGGCC-------CAGG--CCCTCTGGGCTCCAGGTCCATCCGGCCA-C---ACA-----------------------------------------AGGGAGGGCGGCTGCCCTGA--AGTCTGCCCCT--T-G-CCCTGCCATCTCCTTGAGCCACGTGTGGCC-ATTGA--TGGGATC-CCGCGTCCTGTGCTGCC---------------C-------------------------ACTGGGCCAGGCGCCACACG---CGCTGTCTGCTGGGCCCCTGTGG----------------------------------GCCGGG------GTTCAAGGCTGCCCGTGGCCCTGAGCGA--GTCGCGGGCCCCACAAGCCTGGGCGAG--TG-AACACAGGGGGCGCGAGTGCACTTCGGGTCGTCACCATTGCTGCTTGCGGGGCTGGGGA--CGGATGCCATCGGCCGACCTCTGCTCTTGCAGGCCTCCACCAACCGGAAGCGCGTGGAAAACATTGCTAAGAGGAAACTGGATTCCCTAATCA---------------------------------------------     
12 Loxodonta_africana-NW_003573446.1-177338_177443           80.6%  25.6%    ---------------------------------------------------------------------CCAACCC-----------TGGTTCAACCCTGGCGCCACCTCTAG--GCATGAACC----------CCAAGTCCCACACAG-ATGCCAGGAGGCATGTGGA--G------------AGAGCCGCCTG--TCCTGCCAGGGGGTTCCT-----GCGGGTGTCTCCTCTCTGCAGC-------TCAGCTAGCTA--------------------------TCCCT-GCTCCCAGCGGCCACCTGGGCTGGG------GGCTGCAG---------------GTGGGGGCCGAGGACCT-GTGCT---AAGCTGTTGCTGACAAGGC----AGCAAAGACTTTATCTCTCCCTGAGGGGCCATTGGATGGGAAAATAATTGCACAGGAGCCTTCCCCG-CCTCTTGGTTAATTATTTTA-----GAAAGCCCTGAGGCAGTGACTTCTTCCGTGT-------------GCATTT-CTCA--CCAGCCAGAGAGATGGCACAGCT-GCAGTCCTG-ATACCCACTTGGGCT-ACTCCAGACGGGGCTCTG-----GGGACACTCAGATGCCTGAGCCCAGACCCTGCCCCTGAGACATCCAAGGTCATCAAGGCCATGTGGACACT--GCATGGGCCAAGGGTA-GGGGGTCTTG---------------GC--------CCCTGGTGCT-GAAT-AGTCTGTCCACT------------------GTGGCTGGCCCACTTCCCTAGGGTGATA-GGACCCCAGACCCTGCACTACTG---AGTGTTTTCTGAGAGTCCAGGGCAGGATG--CGGGTGCACTGACTCCTCCCCTCCCCC---CGCCACCCTGAAGCCCACTGGGTTGGC--ACCCACAAACTGTGTTAGGTCGTAGGGGAGCATCACCCTGCAGCTGAAGGAGC---CGAGAGTTAGAACCAGCAGGGCC-------------------------AGGGTTTACGTCCCGGGGGCAAATCATCTGTTCTCCGTGAGCCA-------------------------------------GCTTCTAGGATGAGTGAC----CTGACCCA------CATGCTGGTGGCCAGTGCAGTG--------------TGGGCCTGGACAGGACTCCAGT---------------AGCCCCAACTGACCCACTGGAGTGCCCTGC-TGCTGCCGGGCTGGGGACAGACACA-ACAGGGCACCATCTGGCTCCTGCAGGCCTCCACCAACCGGAAGCGTGTGGAAAACATCGCAAAGAGGAAACTGGATTCCCTCATC----------------------------------------------     
13 Trichechus_manatus-NW_004444058.1-177737_177843           80.0%  26.2%    ----------------------------------------------------GGGGGCACCCTGCCCAGCCACCGT-----------GGGCCCAGCACTGGCCCCACCTCAAG--GCGTGAACC----------CCAAGGCCCACAG---ATGCCAGGA---------C--G------------CGTGCCACCTG--CCCTGTCAGGGGGTTCCTGTGGGTGGTTTCCACTCTCTCTGCAGC-------TCAGCTAGCTA--------------------------TCCCT-GCTCCCAGCGGCCGCCTGGGCTAGG------GGCTGCAG---------------GTGGAGGCCGAGGATCT-GTGCT---AAGCTGCTGGTGACGAGGC----AGTGAAGACT--ATCTCTCCCTGAGGGGCCATTGGATGGGAAAATAATTGCACAGGAGCCTTCCCAG-CCTCTTGGTTAATTGTTTTA-----GAAAGCCCTGAGGCAATGGATCCTTCCGTTTGCTGGATGGCTGTGCATTT-CTCA--TCAGCCGAAGAGACCGCACAGCT-GCAGTCGCG-ATATCCACTTGGGCTCACTACAAACAGGGCTCCG-----GGGGCGCTCAGATGCCTGAGCCCAGGCCCTGCCCCTGAGGCGTCCGAGGTCATCAAGGACA--------CT--GTGTGGCTGAGGGTTG-GGGAGTCTTG---------------GC--------ACCTGGTGCC-GAGC-AGTCAGTCCACT------------------GTCACCGGCCCACTTCTCTGGGGTGATG-GGACCCCAGACCCTGCACTGCTG---AGCATCTCTTGGGAGCCCAGGGCAGGCTG--AGGGTGCACTGACTCCCCCCGAAGCCC---ACTGTGC--------------CAGTGA--CCACCAACTGTCTGCTGGGTCCCAGGGCAGCATCATCCTGCAGCTGAAGGAGG---CGAGAGTTAGAACCAGCTGGGCC-------------------------AGGGTTCACGTCCTGGGGGCAAATCACCTGCCCTCTGCGAGCCC-------------------------------------GCTTCAAGGACGAGTA-C----CTGACCCG------CATGCCGGCAGCCAGTGCAGTG--------------GGGACCCGGATGGGGCTCCAGC---------------AGCCCCAGCTGACCCGCCGGAGTGCCCTGC-CGCTGCTGGGCTGGGGACAGACATCAACCAGCCGCCATATGGCTCCTGCAGGCCTCCACCAACCGGAAACGTGTGGAAAACATTGCAAAGAGGAAACTGGATTCCCTCATC----------------------------------------------     
14 Microcebus_murinus-NC_033661.1-180878_180988              76.2%  34.7%    CCGCACACCTGCTGGCGGCCTGTCTATGTCCCCATGTCTGAGCTGACTCTTGGGGTGTG-TCCGTTCACGCTGCCCAGTCCTCTTGGCCCCTGGCAGACAGTGGACC--------CGGGTT----------CCACACCGTT-CCCACCCAGGCCCACACCTGCCACCGTGCTCTTTGCGGCCACCCGCCCCCGTCCCCCCACACCTGCCCTCCTCCAGG-GCCAGCCCTGCTGGGG---------------------------------------------------------------------------------------------------------------------------TGTC-CTGCCTGTGGCCACCTGCACAGAGCTC----TGTCACCACATCCTCAGGGCAGGTG----------------------------GCTTGGCCGCA-----GGGGCTGGGGGCTGGGAA------GC-CAG-AGGGCTTCAGGTGACTC-GGGGACTCCACAGTGAGC-GTCTTCGCGCCTCCGGGCGCTGCTCCAAGCCTTCACTGCTG--CAAGGCAGGAAGACTTTATTTCCCCCCAGGGGGCCGTGCGA--TGGGAGGATGACTGGGCAGGAGCTTCCT-GGCCATGGCTGAGTAATTGCTTTCAAAAGCCCCCAGGCAGCAGAGTTCTCCGTGCTGTGGGCG-GCCCA---CG--TCTCTGGCAGGCCCAGGGTGACAGTGAACC-ACGT---TCTGTGACGTCCA-------------CTCCACCCTGGC----GCTGGGGTTGTCCGGATGCCCAAGGCCCAGGCCCTGCA--CCCTCTGGGCTCCAGGTTCATCTGGCCA-C---GCG-----------------------------------------AGGGAGGGTGGGGCCC-TGA--AGTC-TGCCCC--T-GCCCCTGCCCTCTCCTCGAGCCACGTGTGGCC-AGCAG--TGGGATC-CCACGTCCTGTGCTGCC---------------C-------------------------GCTGGGCCAGGGACCATGCA---AGCTGTCCACTGGCCCCCG-AGG----------------------------------GCCGGG------GCTCAAGGCTGCCTGTGGCCCCGAGCGA--GTTGCAGCCCCCAAGAGCCTGGGGGAGTGAACACGGGGGGGGGCGCGAGTGCCTTTTGGGTCGGCACTGTTGCTGCTTGCGGGGCTGGGGA--CAGACGCCATCGGCCGGCCTCTGCTCTTGCAGGCCTCCATGAACCGGAAGCGCGTGGAAAACATTGCTAAGAGGAAACTGGATTCCCTGATCA---------------------------------------------     
15 Elephantulus_edwardii-NW_006399795.1-177058_177158        76.3%  24.5%    ---------------------------------------------------TCCCAGCACTGGCCCCACCCAAAGGTGCTCCCAGAGGACTTCATAGGTGCAGAGGTATCTAT--GGAGAGACC----------CCCTTCCCCACAGGG-GGCCCTCTTGAGCTGTCCC--TT-CTCTCTGTAGCTCTCCTAGTT--TCTGCTCCTTGTGGCCACCTGGGCTGGGGCCCGTCGAGTGGAAGCTGAGACGTCAGCCAGGTTCTCA-CACGG---------------CATTGG-GCTGGGGGCTCTGTAATTAACGCCT------CGCTCTCA---------------TGGGTGCCTCTGCGCTG-AGCCT---GAGCCGCTGCTGACAAGGC----AGCCAGGACTGTATCTCTCCCCAAGGGGCCATCGGATGGGAAAATAATTGTGCAGGAGCCTTCCCAG-CCTCTCGGCTAATTGTTTTA-----GAAAGCCCTGAGGCAGCGGATCCTTCCGCTTGAGGGGGGTGGCTGTGTGTTCTCA--TCATTCAAGGATTTGGCACAGCC-GCAGTCCTC-AACGTCCACTT-----GCTCCATGTGGGGCTTGG--------------GGGCCTCCTGGGCTAGGCCCTGGCCCTGAGCTGCCTGAGGTCATGAGGGCCATGTGGGCATC--ATACAGGTACGAGGTG-CCAGATCAGC-------------------------CCGTAATGCC-TAGC-ACCA-------------------------------TCATCGCTGGTTCCAAGACTGTG-AGACCCCAGAATCTGCACTTCTC---AATGCCCCCCAAGATCCCAGGGCAGGTCG--AGGATGTACTTACTTCACCCCTGCCTC---TGAGGTC--------CATTGGGCTGGTGACCACAAATGGCCTGCAGGGCCCTGGAGAAGTGGCATCCTGC-------------------------------------------------------------------ATTCCCAACCCCAGGAAAATCACGTGCCCTCTGCA-ATCT-------------------------------------GCTCTGGGGACAAGCGAT----CTGACCTG------CATGTTGACAGCCAGCACAGCA--------------G-GGCCTGGACGGGGCTCCAGC---------------AAC-CCCAGCCGGCCAGCTGAGTGCCCTGC-TGCTGCCAGTCTGGGGACAGGCGCCAACCGGCCGCCGTCTGGCTCTTACAGGCCTCCACCAACCGGAAGCGTGTGGAGAACATTGCAAAGAGGAAACTGGATTCCCTCATC----------------------------------------------     
16 Arvicola_amphibius-NC_052052.2-182849_182946              81.2%  35.3%    -------------------------------------------------------------------------------------GGCCGTCCAGTGAGTGGAGGCACCACTGAGCAGGGGGTGGGGGTGCACCTTGGGTTCCACCTCAGCTGCCTTGTCAGTCCAAGC--TG--------GACTCTGGGTAGCATGCCCAGTCACCCCGGGCCCAGCA-CCAGTACCAGCTTCAA-------GGCCAGCTCCAGTG-----------CT--GAGACCTCCTG----------------------------------------------------------------------TGTGGTGGGC-CCCTC-------------------TAG------CGGTCAC--CTCCACTTCA-GCT-TGTCTGGACCAGGGCTGGGGGCTGTGGAGGGGGCCTGAGCGGTCCGCAGGAGCCTCTGCTGTTGGGGCTGGGGGTTGGGGAGCTGAGTGGA-GACAGGCTCTGTAGCTG---ACATCTCTCCTCTGGGCATTGC----------TCATCCACTGCTCTGAGCAAAGACTTTATTTTCCCCCGAGGAGTCGTCAGA--TGAGAAAATAATTGTGCAGGAGGCCTCCGGGCCAGAGTCAGCTAATTGTTTTAGAAAACCCTGAGACAGCAGATTCTTCCTATTTTGGGTGTGC--CTGCACATGTCTCTGGCTGGCCCAGGATGGTGACAAAAA-CTTA---TGACTGTGACATCCTTA--ATGGCCACTCCATCCTGAGCA-CCC-AGGGAGTCCTG-AAGTCCCAGATTGAGGTCTTCCC--TC--AAGCGTTCCAAGTACATCGGTGTCTC---ACTGGGCTTATCTTAGAG-----------AG-TGCACCCAGCCAGGGTTTGCG---GTTTCTCC--AGTCTGCCCTG--T-C-CCTACTGTCCACTTGACATGTATGGTGGCC-AGTGT--GTAGGTC-CCATCC---------------------------------TCCTCCACC--GGG--ATCCCCCAGGCAGGAC-----------------------------------CATG--CTACTCTAGGGACCGCAT-GTGTCTGGGTTTTAGTGC--------------TGTCCATAGCTGTCC--AGGGAAA-ATCACATT--CTCTGCACTGAGACTCAGGGGATGTATAGGGACTATTGATGGTTGCCCCCTCTGCTGCTCACCGGAGTGGGGATAGATGCCAACGGGCTGACCTCTGGCTGCGGCAGGCCTCCACCAATCGGAAGCGTGTGGAAAACATTGCTAAGAAGAAGCTGGATTCTCTAATC----------------------------------------------     
17 Equus_asinus-NC_052181.1-195066_195182                    88.6%  33.8%    -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGTCAAGAAGGGCCGGG-TACCG----------------C--CG-GGCTGGGGGCCTCTAATTCGCATCTTCTCTCCCCTGGGT---------------ACTGCTCCAAGCCGCTG-CTGTG---AGGCAGAGAAGGCATTATT----TCTCCCCACATTATTTCTCCCTGCGGGGCCATCAGCTAGGAGAATAACGGTGCAGGAGCCTC--CTGGCCATGCTGCTAATTGTTTTA-----GAAAGCCCCGAGGCAGCGGGGTTCCTTCTGCTTTGGGGCCAGTG-CATAGCTCCAT-CGGCCCAAGGTGACCATAAACCC-ACGTTCTGTGATGTGTACCTTGCACCCACTCCAACCTGGGCCAG-----GGACTCCCAGACACCCAAGGCCCGGGCCCTGCCCTGGATGTGTCCAAAATCATTATGGCCACACTTGGGGC---TGCCCAGGGCGGGGA-GGGTACCTGAAGGCCACCCTGACCAGCCCCTGGCACCAGCCAGCC-AGGC-AGTCTGTCCCCGTCCCTGC------CCATCCCTGTGAGGCGCATGGTGGCGGGTGGTG-GGATCCCAGATCCTGAGCTGC----TGAGTGTCTCTTGGAGCCCAGAGAGGCCTC--CAGGTGTCCTGACCTCCTCCTCCAAGGCCCACTGGGCTGGGCGCCCGGTGAGC--------------TGTCTGCTGGG-TTCTCATGGGCAGCATCGTGCAGCTGAA-GGAAGCAGGCAT--GGGAATCAGATGGGCCTGGGTTCAGGG-CTGC----TCGTCACTCTTTGTGACCCTGGGGCAAATCGCATGCCTGCCGTGTGCCTCAGGAGCGGGCAGGTGGGCACG--GGGACAAAGCCATGCCGTGGGAGTGAATGTGCGGCTGGTGCTG------CGAGTGAGAGGCAGAGATGGGG----CA---------GGGCTGGCCCTGGCTCCCAGCAGGCCCCTGGGCCCCACCCAAGACCCCAAGGGCTGCTGCCACTGCTGCCTC-AGGACTGGGGACAGATGCCAA---GTGGCCATCTGGGTCTTGCAGGCCTCCAGCAATCGGAAGCGCGTGGAAAACATTGCGAAGAGGAAACTGGATTCCCTAATC----------------------------------------------     
18 Manis_javanica-NW_023436200.1-184106_184196               78.3%  25.7%    ---------------GGCGACGTGTCTGAC---------GAGGACAGCGCGGAGGAGCTTGAGGCCGACTGCAAGCTCCCGGATGGGGACGTGAGCCGGGGGGCCTCCTGCAG--GGCG---GG----------GCCGGGC---------------CCCCAGGGGCAGG--C---TCA---TGGCCTCCACGT--------------GCTGTTCTGTCT-GCGCCCAGCGGTGCAGGGAGGCTGAGGGGTCAGGAGG----------------------GCTGTGCAGAGG-GACTGGGGCTCCGTGATTAGCATCTCCTCTCCTCTGGGG----------------CTGCTCTAAGCTGTGG-CCGCG---AGGCAGCAAAGGCAT-------------------TATTTCTCCCCACGGGGCCATTGGATGGGAAATAATTACATGGAGC--------CACTGAGCTGGCTGATTGTTTTA-----GGAACCCTGGGGC-AGCAGGATCCTTGCTGCTCCTGGTGCCTGCGCACCGCT--CC-CCACCCGAGGTGGCTGAG-----------AGCCCATGTCTACCTTATACCCTGC--------CAACTGGCACAGGACACCCTGGGGCCCAAGGCCCTGGCCCTGCCCTGGAGGGGCCCATGTCGGTCAGGGCCACACTGGGGGA---TGCTCGGGTGGG-GA-GAGCTCCTGGAGA--CCCCTCCCCAGCCCCCGGCACCAGCCAGCC-AGGC-AGTCCGAACCCGCCCCTGCCCACGCCCATCTTCATGAGGCATGCGGTGACCAGTGGCA-GGGTCCCAGGCCCA--------------------------------------------------------------------------CTGGGCAGCCAACCAGG---------------------TCTGCTGG----------GGC----------CCCTCAG------GCAGGCATTAAGGGTCAGGAGGGCCTGGAGTCAGGGCCTGC----TGGTCATTGTCCACAGTCCA-GGGCAAGTCACATGCCCGCTGGCCAGGGGAC--------------------------------TTCATGTAGGAGTGACGTGCAGT-CCACACCA------GGTGGGAGGGGCTGATATGTGCTCGGTCCAGATGGGGTGGGCTGCCCCCAGCTCCAGCAGGACCCTGCAGCGCTGCCCAAGACCTGGT------------------GGGGGGCCTCCCTGCTGCTGCCAACAGGCCGGCCATCTGGCTCCTGCAGGCCTCCTCCAATCGGAAGCGTGTGGAAAGCATCGCCAAGAGGAAGCTGGATTCCCTAATC----------------------------------------------     
19 Lemur_catta-NC_059130.1-181054_181156                     76.7%  35.8%    --------------GGTGGCAGTTTCGGTTCCCATTTCTGGGCCGACTCTTGCAGAGCTCTC--CGCGTGCTGCCCAGTCCTCTTGGCCCCTCAGCAGGGGCAGCCC--------CGGCGGACGGTGG--CCCCCGGGCTC-GACACCATTCCCACCTACACCCACCGC-CGGGCTCTCTGCTGCCACCCCTGTCCCCCAGCACCCGCCCTCCTCCAAG-GCCAGCCCTGATGA-G---------------------------------------------------------------------------------------------------------------------------GGTC-CCGCCTGTGGTCACCTGCACAGAGCGC----TGTCACCACATCCTCAGGGCTGCTG----------------------------GCTTGGGCTAG-----GGGCTGG-------GAAG------CC-AGGGAGGGCTTCAGGGGACTC-GAGGACTCCGCAGTCAGC-GTCCTCTTGCCTCTGGGCGCTGCTCCGAGCCTCCGCCTGCTACAAGGCCGCGAGGACTTCATTTCTCCCTGGGGGACCGTGCAG--TGGGAGCATGACTGGGCAGGAGCTTCCC-GGCTGCAGCTGGGTAACCGCTTTCGAAAGCCCCCAGGCAGCAGCATTCTCTGCGCTGCGGGTGTGGCCG---CG--TCTCTGACAGGCCCAGGGCGATGGTGAACT-GCGT---TCTGTGACGTCCACCTC--GTGCCCACTCCGCCCTGGC----GCTGGGGTTGTCCGGATGCCCGAGGCCCAGGCCCGGCA--CCCTCTGGGCTCCAGGTTCATCTGGCCA-C---GCA-----------------------------------------CGGGAGGGCAGCTGCCCTGA--AGTCTGCCCCT--T-GCCCCTGCCATCTCCTTGGGCCATGTGTGGCC-AGTGG--TGGGATC-CCACGTCCTGTGCTGCC---------------C-------------------------ACCGGGCCGGGCGCCATGTG---GGCTGTCCTCTGGGTCCCCGTGG----------------------------------GCTGGG------GTTCAAGGCTGCCTGTGGCCCTGAGCGA--GTCGCAGGCCCCTGCGAGCCTGGGCAAG-CGAGCACAAGGGGGCACGAGTGCCCTTTGGGTTGTCACCGTTGTTGCATGCGGGGCTGGGAT--AGA--TGCCATCGGCGGCCTCTGCTCTTGCAGGTACCCACCAATCGGAAGCACGTAGAAAACATTGCTAAGAGGAAACTGGATTCCCTAATCAA--------------------------------------------     
20 Nannospalax_galili-NW_008355419.1-177009_177121           87.8%  40.5%    ----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG--GG--------TGGCCAGTGGCCCTGCCCAGCTACCCTCAGGCCCAGTA-CCAATGCCAACTCCAA-------GGCCAACTTCAATG-----------CT--AAGACCTCCTG----------------------------------------------------------------------TAGGCAGGTC-CCTCTAGTGGTCATTATCACAGAGGAC------TCTGCGT--CTTCACTGTG-GCT-GGCCTGGTCCATGGCTGGGAGCTGTGGAGGAAGCCTGAGCCATCTGCAAGGGGCTCTGCTGGGAGGGGGGAGCTGTGTGGAGGTGGG----------GCTCTGTAACTGG-GTCTTCTCTCCTCTGGGTGCAGCT------TT-AAGCTGCTGTGTGGCAATGAAGACTCTATTTCTCTCTGAGGAGCTGTTAAA--TGGGAAAATAATTGTGCCTGAGGCCTCTGGGCCAGAGCTGGCTAATTGTTTCAGAAAGTCCTGAGGCAGCAGATTCCTCCTGTTTTGGGTGTGC--CCGCACAGGTCTCTGGATGACCCGGGGTGGTGACAGA-G-CTTA---TGACTGTGACATCCTTA--GTGGCCACACCAACCCAGGTA-CCCAGGACAGTCCTG-GTGCCCCAGACCCAAGTCCTTCC--TC--AAGCTCTCCAAGTACATCAGGGCCTC---GCTGGGGCTCTTTCCTTAGAG--------AA-GGGTGCTTGGCCAGGACTGCAGGCTCCCCTAA--AATCTGCCCTG--C-T-CTTGCTTTCCCATCGAGGTGCATGGCGGCC-AACGT--TTGGGCC-TCGGATCCTGTGCTATCTGTAGGGGTGGAGTGCCCTGACCTCTTTCAG--AGG--CTCACTGGGCTTGGACCTGCCAGCTATGTGCTCTGCTCGCCA----GGCAGCACT--ATATTGAAGGGATCGCAT-ATGCCTACCTGTAGCT-------------------ACCTACAGGTGG--GGCGAATCATAGCCTC--TGTGCCTTGTGTGCACAGTTTGTGTACAGGGACTTTGAAGACTGTTCCCCTCTGCTGCTCACTGGGCTGGGGACAGGTGCCAGTGGACTGACCTCTGGCTTTGGCAGGCCTCCACCAATCGGAAGCGTGTGGAAAACATTGCTAAGAAGAAACTGGATTCTCTGATC----------------------------------------------     
21 Rousettus_aegyptiacus-NW_023416284.1-184646_184774        85.0%  31.7%    -------------------------------------------------------------------------------------------------------------------AGCC---GG----------CCTGGTC-------------CGGCTGGGGTCCCGG--C---CAT--------------CA----CCTCC----------CCAGAG-CACGGCTCC-------------TCCTCACTGCAGCTCTGCTGTGGGAGGG---------------GGGACG-GGAGGGGCCTCGGTAGTGAGCACC--TTCCCCTCGGGGC---------------CCTGCTCTGGGCGGCCC-AGGCT---AGCAG------------GC----TGTGGAGGCCGCACTTCCCCCCGAGGGGCCGTAGGATGTGAAGATAATTGT------------------------GCAGATCGTTTTA-----GAAAGCCCCGAGGCAGCGATTGCTCCTGCTGCGCGGTGCCCAC-----------GCTTGGCCCCGGGG--GATGGCAAAC-CGCTTCTGGGAGGTCTTCCGTGCACCGGCTCCAGCCTGGGCCCA-----GGGTGCTTAGAGGCCCAAGGCCCAGGCCCTGG-------GGGTGCAAGTTCGTCAGGGCCACTCTGGGGGC---TGCTCCGGGCAG-AA-GGGAGCCTGGAGGCGATGCTGGCCGGCGCCTAGCCCTGGCCAGCC-AGGT-ACTGTCCCGCCCCTG---C------CCATCC----GAGGC------------CACTGG-GGACCCCAGACCCGGAGCTGCTGGGCAAGCAGCTCTCAGAGTCCAGAGTGGCTGC--CGGGGGCACTGACCCCCTCCCCTTGGC-CCGGTGGGCCGGGTACCCTGTGGGT--------------GCTCGGCGGGG-TCCCCCCGGGCAGCGTCGAGCCGCTGAAGGAGGCATTAGAGCTGGGTTGCATTCCAGCGCGGGGTTCAGGCCCGC----TGGGCGCTGTCTGCA--GCCCGGGCGACTCGCGTGCCTGGCGGGCGCCACAGGCGGGCCGTGTGG-GTGCA--AGGACAGCCCCGGGGCGCGGGAGGGAGGCTGCAGCCAGGGCCG------C-TGCGAGAGGCCCAGCCGGCGG---CTCCCCCGGGCGGGGCTGGCCCGGCGCCCAGCA-GGCCCGCGGCCCAGCCCCAGGTCCTGGGGTGCGTCACTGCTGCTGCCCGCAGGGCTGGGGACCG----ATGCCAGCCCGGCCCTGGCTGTTGCAGGCCTCCGCCCATCGGAAGCGTGTGGAACACATCGCCAAGAGGAAACTGGAGTCCCTGATCAA--------------------------------------------     
22 Fukomys_damarensis-NW_022900935.1-183413_183516           79.0%  34.1%    --------------------------------------------AGCTGACTTAGTGCTGCGAAATGCCTGGGCCCTGTCCTCCTGGCCCCTGAGCTCCTGGGGGTGGCCCTG------GGGTG-----------TTGGTCTCACACGGTTCCCACCCACACTGGCCTC------------CAC---CCAGAATATCCAGGATTCCTGCCATTTCCTGG-CCAGCCCCAGC--CAGACTGAGTGGCTGGTAGTCCTG-----------CC--GGGCAGA-------------CCCTG-----------------------------------CCCAACAT--GAGATCAAAGCTGGGTGGATC-CCAGG--CTGAGAGCAGCAGGGCGAGCCATCCTGGCTGTGGTCCTCACTGCCTCCC----------CAGGGCTGGT----GTGGCCCCCACGAGGGAGGGAGGCCAAGGAGTCTTGAG------GC-CCCTGGGCTCAAGGGGCTGGG-GGTGGCTCCGTAATTGGC-TTCTCACCCC-----CGCACTGTTCTGAGTTG--CGCTGCTTCTGGGAGGTGGCAAGGCCTATTTCTCCACAGGGGCCATTGGG--TGGGAAAATAATCTTACAGGAGGCTTCC-TGGCCAGGCTGGCTAATTGTTTTAGAAAACACTGACACAACAGAACTCTTCCCATGCTGGGTGTGCCCCTCATGCATCTGCCTGCCTCCTGG----GTGGGAAACC-TGTG---ACCATGATGTCTGCTTG--CCACGTGCTCCAACTGGGGGC-CATGTGGGGCC----------GCTGTGGCAGGGAGGGCG-------------CCCAGTGCAGCC-------------------------------------------------------------CTGGCTCCTCCGA--CATCTGCCCTC--T-T-------------CTCAAGTGTGTGGTGGCT-GGTGT--G--TGTC-CCTGAGCCTGTGCTGACCACTG------AGCATGCT---GACCTCCCC--CTGAGTCCACTGGGCTGGGCACCTTGAG--------------CTCCCCCGGGCAGCACCAAGCCACTGGAGGGACCTGAT-GG-----GCCT-------------------------------GGTCT--GTGTATGGCCACCCTCAGCAGCCCG--------GGGTGAATCTCGGCCTCGAGAGCTGCGCCCAACAGTGTGCGGGCC-CTAGGGCTGGGTACAGGTGCTAAGGGCAGGCCTCTGGCTCCCACAGGCCTCCACCAATCGGAAGCGTGTGGAAAACATCGCCAAGAAGAAACTGGATTCTCTAATC----------------------------------------------     
23 Prionailurus_bengalensis-NC_057345.1-196815_196948        86.1%  30.3%    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAG--A---CGT---GGCCCTGCACTCC----CAGCTGGCAGAGGTGCTGGGG-CTGGGGGCTGGCTGCACGGGAAGGGGGAGTGAAAAAGGGCTTGG-CAGAG---------------GGGGGC-TGGGGGGACTCTGTAATTAGCATCTTTTCTCCTCTGGGC---------------ACTGTTCTAAGCCGCTG-CTCCG---AGGCGGGAAGGCATTA--------------------TTTCTCCCTGAGGGGCCATCGGATGGGAAAATAATTGTGCAGGAGCATTCCCAGCCATGCTGGCTAATTGTTTGA-----GAAAGCCCCGAGGCAGCGGAATTCTCCGCGTGGATGTGCC-----CGCATATTTCTCTGGCTCCGGGTGACAGGGCACCC-GTGTTCTCTGACACCTAGGGTGCACCCCTCCAGCCTGGGCTCCG-----GGGCACCCAGATGCCCACGGCCCAGGCGCTGCCCTGGAGGGGCCCGAGTTTGTTAGGGCTATGATGGGGGC---TGCTTCGGACAGAGA-GGGCACCTAGAGGCTATGCCCCGGGT---------GCTGGCGGCC-GGGC-CGCCCATCCCTGCCCCCTG------CCCATCTCCTGAGGGACATCGTAGCCACTGGTG-GGATCCCAGATCCCGAGCTGC----TTCGGGCTCT-TGGAGCCCAGCGTGGCCAC--CGGGCACACCGACTGCCTCCCCCACTGGCCAGACACCGGAATCCCTGG---------------------------------------GGCGGCGGCGTGCAGCTAAAGGGGTGCAGGTGT--TAAAATCTGAGAGGC----------------C----TGGTTCAGAGCTGTGGCCCTGGGGCAGATCGTAGGCCTGAGGTGCGCCCCAGGAGCTGGGAGGTGTGGGGG--TAGGCAACG---CAATGCGGGGGTGAGTGTGCGG----CCAGG------GGTGTGAGAAGCCAAGACGGGG----TT---------CGGGCTCCCCGGCT-CCAGCAGGCCCCCGCGGCCCTGCCCGAGACCCTGGGGGCTGTCACCGCTGCTGCCGT-GGGGCTGGGGGCTGATGGCAAGGGGCGACCGTGTGGCTCTGGCAGGCCGCCACCAACCGGAAGCGTGTGGAAAACATCGCCAAGAGGAAACTGGATTCCCTCATG----------------------------------------------     
24 Halichoerus_grypus-NW_023403807.1-195147_195344           74.3%  24.5%    -------------AGGGTGCTTGGGCAG------------------ATGCGAGGGTGCTTTGTCCAGTGGCTACACAGCTGG-GCATGTGCTCAGCCAGGGGGGGCCCTTCCC--TACC---TG----------CCCCTTCACACAAGACTTGGCCCTTGAGCTCCCAG--C---TAG---TGGGCTTCCACCT----TTTCACCCAGAGGCTCTGGGG-CTGGGGGGTCACACAGGGAGGCTGAGGAGTGAAAAAAGGCTCGG-CATAG---------------CGGGGC-TGGGGGAACTCTGTAATTAGCTTCTTCTCTCCTCTGGGC---------------ACTGTTCTAAGCCGCTG-CTGTG---AGGTAGGAAGGCATTA--------------------TTTCTCCCGGAGGGGCCCTCAGATGGGAAAATAATTGTGCAGGAGCATTCCCAGCCACGTTAGCTAATTGTTTTA-----GAAAGCCCTGAAGCAGCAGAATTCTTTCTGCTTTGGATGTGCC--TGCATATTCCTCTGGCCCCAGGTGACCGTAAACCC-ATGTTGTCTGATGTCTAACTGGCATGACTCC-AACCGGGGCCCG-----GGGCACCCGGATGCCCATGGCCCAGGCCCTGCCCCAGAGGGGTCCCTGTGTGTCAGGGCTACAAGGGGGCG--CTGCTCCAGGCAGGGA---------------GAACTGCCCAGCCCCCGGTTGCTGGCCAGCC-AGGC-CCTCCATCCCCACCCCTGC------CCATCTCCTTGAGGTGTCTGATAGCCAGTGGAG-GGATCCCAGATCCCCAGCTGC----TTAGGGCTCC-TGGAGTCCAGAGTGGCCAC--CGGGTACCCTGACCCCCTCCCCCAAGGCCCAC-TGGCCGGATGCGTGGCAAGC--------------TGTCTGCTGAG-TTTCTGTGGGCAGCATTGTGCAGCTAAA-GGATGCAGGTGT--TAAAATCAGAGAGGCCTTGGTTCAGGGCCTGC----TGGTCACTGTCTGTGGCTCTGGGGCAAATCACAGGCCTGCTGTCTGGCCCCGCGGTGGGGTGGTGTGAGG----ATAAAGCAACGCCATGTAGGAGTGAGTGTGCGGCTGGGGCCG------GGGGTGAGAAGCCAAGATGGGG----TT---------CTGGCTCCCCAGCTCCAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
25 Neophocaena_asiaeorientalis-NW_020174791.1-194373_194474  75.8%  25.8%    -------------AGGTGGCAGGGACAGAG--GGGCAGGGGGCAGATTCTGAGGGTGATTTGCAAAGCTGCCAGGCTGCTGG----------------------GCACCCCCC--TGCC---CA----------GCCCTCCACACAGGGCACGAACCCCGAGTTCCCAG--C---TAG---CGG-CTGTCGCCT----CTTCTCAGAGAGTCGCTGGGA-CCAG-GGGCAATGCTGGGAGGCTGAGGAGTCCACAAGGGCTTTGAGCAGCCGAGGGGCAGGCGGGGGTGGG-GGTGGGGACTCTCTAATTAGCTTCTTCCCTCTTCTGGGT---------------AC-----------------------------------------------TGCCAAGGTATTATTTCTCCCTGAGGGACCATCGGATGGGAAAATAATCTT-----------------GCTGCTGGCTAATTGTTTTA-----GAAAGCCCTGAGGCAGTGGATTCCTCCGCTCTGGGTGGGTTTGCAGGTTTCCCTGCCTGGCCAGGGGTGATAGTAAGCCC-TCCGTCTGTGGTGGCCACCTTGCACCCACTCCAGCCTGGCTGGGCATGGGGGTGCCCAGATGCCCCAGGCCCAGGCCCTGCCTGGA--GGGTGCAAGTTGGTCAGGACCAC------------------------------------------------------------------------G-CTGG-GGTCTGTCC-CCACCCCAT------CCATCTCCTTGAGGCGCACGGTGGCTGGTGGTG-GGTTCCCAGATCCTGAGCCGC----TGAGCGGCTCTCAGAGCCCAGAGTGGCCGC--CGGGTGCCCGGTGAGCGG---------------------------------------------------TCCACTTG---GTCCGGCGGCCGCATCGTGCACCTGAA-GGAGA--CAGGTGTTAGAATCGGATGGGCCTGGGCTCAGGGCCTGC----TCGGCACTGTCTGAGGCCCCGGGGCAAATCACATGCCGGGGCGCACAGCAACGT--------------------------------GATGTGGGAGCGAGCCTGGGGCCAGCTCCA------GGCGTGAGCTGGAGCTCACGTGG---GC---------TGAGCG--------------TGAAGTGGTGCTGGCCCTGCCCGAGACCGGACGCTGTCCCCGCTGCTGCCCGCAAGCTGGGGACCGAGGCCAAGGGGCTGGCCGTCCGCCTCTTGCAGGCCTCCACCAATCTGAAGCGTGTGGAAAACATTGCCAAGAGGAAACTGGATTCCCTAATG----------------------------------------------     
   clustal                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     .   .