RNAcode could not find significant results in the alignment.
CCTTGCTGTCACAGTCTCGAGCTGGCCCCATCCCTGGGACTGTAGGTGGGAAGGGCATTGCAAGGCACAGGGGCGGGGATGGGGGGAGGAGAGATGAGCTGGGAGGAGCCAGGGGCCTGCTGGGATCTCAGGACAGAGTTGCACCTATGACCAGTGTAATCTGTGCAGGCACAATGTTCTCCTGCAGGCCCTGGGCTTCAGGCCTCAGTTTCTTGCCTGAGAAGTGGGGGAATGAGCCCCTGCGCCCTGCCTGCCCACTCCACATCACAGGACTTGCTCATCTCTTGCCCTGGTTCATGCCCTCTTGCTCTGGGTCACTTACATTTTCTGAAAGAATCATGGCTGCCTTTTGGTAAAAATCCAAGTAAAACATACACATGGTTAAAAATGAAGCTGAAAAGCTTATAATTAAAAGTCCCTGCTATACTCCCCATTCTGCACTGTGCAGGTAATAACCATGTTCCACCAGATGGTGTGTGCCAGGCTTATGTCTCCTTCTTTATGGGACCAATGTCAGGACCCCAGGGCCATTCAGAGGACAGGGTCCCCAGTATCTAGGTCAAAAGGATTCTATTTCCCAGCCTATCTATAGCTCCACACTGTACCTTGGTTTTGTCCACATCATTTTAAAACCATGACTTTTTCAAACGTTCCTTTTGTTTTCCTGGAGTTTCTCATTGCCTTTGTTTTTTTTCTTATTGGGGAAAGCAGCTCATGCTCTCTTTACCAGTCCCTAAGATTCTCCCAGCTCCTTTCCCATCCACTCTGTTGCTTTTCAAAGCCATTGACGGGTGGGCCACCTCCCAGAGCTGCTGGTAATCCCAGCTATCCTGGGTTCCTGGTGAAGACCCCTCCTCATTCAATGGTTTAGATGACCTGGGATCTTGCAGAGGTGGGGCTTACCCATCCTCTGAGGCCCTGGCCTCATCCTGCTCTTTCTGCCTTGGGGCCACAGGTACCCAGTGATCCTGTCCATCGAAAACCACTGCAGTGTCATCCA
Sequences in the aligment must have a pairwise distance to any other sequence of 10.0%.
Sequences can only have pairwise distance to the input sequence of 60.0%.
Sequences are searched in the RefSeq Representative Genome Database.
Reference sequence (1): Target Identities normalised by aligned length. Colored by: consensus/70% |
cov pid 1 [ . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . . . : . . . . 4 . . . . : . . . . 5 . . . . : . . . . 6 . . . . : . . . . 7 . . . . : . . . . 8 . . . . : . . . . 9 . . . . : . . . . 0 . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . . . : . . . . 4 . . . . : . . . . 5 . . . . : . ] 1568 1 Target 100.0% 100.0% ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTGCTGTCACAGTCTCGAGCTG-GCCCCAT-CCCTGGGACTGTAGGTGGG----AAGGGCATTGCAAGGCACAGGGGCGGGGATGGGGGGAGGAGAGATGAGCTGGGAGGAGCCAGGGGCCTGCTGGGATCTCAGGACAGAGTTGCACCTATGACCAGTGT----AATCTGTGCAGG-CACAATGTTC---TCCTGCA------GGCCCTGGGCTTCAGGCCTCAGTTTCTTGCCT-------GAGAAGTGGGGG----AATGAGCCCCTGCGCCCTGCCTGCCCACTCCACATCACAGGACTTGCTCAT------CTCTTGCCCTGGTTCATGCCC---TCTTGCTCTGGGTCACTTACATTTTCTGAAAGAATCATGGCTGCCTTTTGGTAAAAATCCAAG-------------TAAAACATACACATGGTTA---AA-------AATGA--AGCTGAAAAGCTTATAATTAAAAGTC-CCTGCTATACT-----CCCCATTCTGCACTGTGCAGGTAATAACCATG-TTCCACCAGATGGT-GTGTGCCAGGCTTATGTCTCCTTC-TTTATGGGACCAATGTCAGGACCCCAGGGCCATTCAGAGGACAGGGTCCCCAGTATCTAGGTCAAAAGGATTCTATTTCCCAGCC--TATCTATAGCTCCACACTGTACCTTGGTTTTGTCC---------------------------------------------------------------------------------------------------------------------------------------ACATCATTTTAAAACCATGACTTTTTCAAAC--GTTCCTTTTGTTTTCCTGGAGTTTCTCATTGCCTTTGTTTTTTTTCTTATTGGGGAAA---GCAGCTCATGCTCTCTTTACCAGTCCCTAAGATTCTCCCAGCTCCTTTCCCATCCACTCTGTTGCTTTTCAAAGCCATTGACGGGTGGGCCACCTCCCAGAGCTGCTGGTAATCCCAGCTATCCTGGGTTCCTGGTGAAGACCCCTCCTCATTCAATGGTTTAGATGACCTGG-GATCTTGCAGAGGTGGGGCTTACCCATCCTCTGAGGCCCTGGCCTCATCCTGCTCTTTCTGCCTTGGGGCCACAGGTACCCAGTGATCCTGTCCATCGAAAACCACTGCAGTGTCATCCA--------------------- 2 Macaca_nemestrina-NW_012011823.1-213991_214575 97.5% 67.6% -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGTCACTTACATTTTCTAAAATAATAATGGCTGCCTTTTGGTAAAAATCCAAGTAAAATGTATACATGGTTAAAAAAAATGAAGCTGAAAAGCTTCTAATTAAAAGTCCCTGGGC------CGGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGACGGGCGGATCACAA-GGTCAGGAGA---TCGAGAC------CATCCTGGCTAACACGGTGAAACCCCGTCTCT-------ACTAAAAAGTAC-AAAAAACTAGCCGGGTGAGGTGGCAGGCACCTGTAGTCCCAGCTACTCGGGAGG------CT--GAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCTGA-----GATCG-CGCCACTGCACTGTAGCCTGGG-------------CGACAGAGCAAGACTCTGT---CT-------CAAAA--AAAAA------AAAAAAAAAAAAGTC-CCTGCTACACT-----CCCCATTCTGCACTGTGCAGGTAATAACCATG-TTCCACCAGATGGT-GTGTGCCAGGCTTATGTCTCCTTC-TTTATGGGACCAATGTCAGGACCCCAGGGCCATTCAGAGGACAGTGTCCCCAGTATCTAGGTCAAAGGGATTCTATTTCCCAGCC--TATCTATTGCTCCACACTGTACCTTGGTTTTGTCC---------------------------------------------------------------------------------------------------------------------------------------ACATCGTTTTAAAACCATGACTTTTTCAAAC--GTTCCTTTTATTTTCCTGGAGTTTCTAGTTGCCTTTGGTTTTTTCCTTATTGGGGAAA---GAAACTCATGCTGTCTTTACCAGTCCCTAAGATTCTCCCAGCTCCTTTCCCACCCACTCAGTTGCTTTTCAAAGCCACTGATGGGTGGGCCACCTCCCAGAGCTGCTGGTAGTCCCAGCTATCCTGGGTTCCTGGTGAAGACCCCTCCTCATTCAATGGTTGG-----GGTGG-GCCCTTGCAGAGGTGGGGCCTACCCATCCTCTGAGGCCCTGGCCTCATCCTGCTCCTTCTGCTTTGGGGCCACAGGTACCCAGTGATCCTGTCCATCGAGAACCACTGCAGTGTCATCCAGC------------------- 3 Carlito_syrichta-NW_007256000.1-145135_145947 98.1% 71.0% ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGGGAAGAAGGGCAGTTGGCCTCTGTAGGGC-GGCCCTGCCCCTGGAATTGCAGA-TGG----GATGGTGTCGCAGCCCACGGGGGCTGGGACACGCAGGTCTCCCGTTACAGCGGAGAAGCCAGGGC-CA--GTGGGCATCAGGACAGGGCTGCGCTTCACATC--TGG----GGTGATTCTTGC-AGGTCCGAGG---CCCTGCA------GGCGCTGGTCTTCAGGCTCCAGCCTCTGCCTG-------AGGAATGGGAGGCAGGTGCCTGCACCCACGCCCTGCTTGCCCTCTCCATGTCACAGGGCTTGCTCA--------TCTCGCTGTGGCCCGTGTCC---TCTTGCTTGGTGTCACTTACGTTTTCCACAGGAATCATGGTTGCCTTTTGATAAAACCCCCAG-------------TAAAATGTGCACATGGTTA---AA-------ACTAA--AGGGGAAAAACTGATAATGGAAAGCC-CCATGGCTACT-----CGCCGTTCTGCACCGTGCAGGTAACAA-CATG-CTCTGCCAGATGGT-GTGTGCCTGGCTTATGTCTCCTTC-TTTATGGGGCCAGTGTCAGGACCTGGGGCCGTTC-AGAG--GACAGCCTCCAGAATCTAGGTCAAAGGGATCCTGCCTCTCAGTC--TATTCACTGCTCCACATGGCATCTCAGTGTAGTCC---------------------------------------------------------------------------------------------------------------------------------------ACACCGTTTTTAAACCATAACTTTTTTCTAACGTTTCCTTTTGTTTTCCCGGAGTTTTGAATC-ACATTTGTGTTTTCCTTATCGGGGAAA---GAAGCT-CATGCCTCTTTACCTGCCCATAAGAGTCTCCTGGCTCTTTCCCCACCCACTCAGTTGATTTTCAAAGCCATTGG----TGGGCCACTTCCCAAAGCTGCTGGCAGCCCCAGCTATCCTGGGCTCCCGGGGGA-AGCCCCCCCCATTCAATGATGCAGGGGACCTGG-GCTCCTGCAGAGGTGGGGCTTAGCCCTCCTCTGAGGCCCTGGCCTCACCCTGCTCTTTCTGCCTTGGGGCCACAGGTACCCTGTGATCCTGTCCATCGAGAACCACTGTAGTGTCATCCAGCA------------------ 4 Odobenus_rosmarus-NW_004450599.1-193262_194173 79.2% 47.3% ----------------------------------------------------------------------------------------GTGGGAGTGAGGATTGGCAGCC--TGGGCCCCAGAATTGCAG--GTGAGAGGGGCATCTCAGGGCAG-GGGAGCTTGG---ACAGAC-------------------------AGGTGTCT-GTAGCTGCAGAGGACCCAGGGACCC-----GCTAATGTCTCA--GCA-------CA-------------GGGCTTGCACCTTATGTGTGTCA------GCATAA--T-CTTTGCAGGCATAA-----------GGTTCTTCCCTAGGGCCTTGGGCTTTAG-GCTTCAGTCTC-----TT------GCCTGA-----GAAATGGGG--AGATGAATACTTCTGC-CCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTCCTGTCTGCCCTTTCCACATCACAGGACTTGCCCATCTCT------TGCTTTGATTCATGCCC---TCTATGTCTGGGTCACTTACGTTTTCTAAAAAGATCATGTTA-CCTTTGGGCAAAAATCCAAG-------------TAAAATGTGCACTTGGTT----AAAAAACAAATCAAACAACTGAAGAGCATATAATGAAAATCCCTATGTTATACTC-----CCTATTCTGCACTACATAGGTAATAACAATG-TTCTACCAGATGGT-ATGTGCCCACCTTATGTCTCCTTT-CTTATGGGGCCAATGTTGGGACCTCAGAGCCATTCACAGGATGGTGTCTCCAGTATCTAGGTCAATGAGATTATCTTTCTC--AGTCTATTCATTGCTCCACGTTGCACCTCAGTTGAGTCCACATCATTTTTAAACC---------------------------------------------------------------------------------------------------------------------------ATGACTTGATGAC----TTGCTTGAATATTTCCTCTT-GTTTTCCTGGAGTTTCTAATTGCCTTTGTTTTTTCTTATTGGGATATGG-----ATTGCATGCCTTCTTTATCTGTCCCTAA-AATCTCCCAGCTCCTTTCCCACCCACTCAGTTGCTTTTCAAAGCCATTGA----TGGACCCCCTCCCAGAGTGGCTGGCAGTTCCACCTATTCTGGTTG-TTGGTAAAGATATTTTTTCATTCACTGGTGCAGGTGACTTGA-GGTTTTACACAGGTGGGGCCTTGCCCTCCCCTGGCTTCACTCT-------GCTCCTTCCACCTTG-GGGCCACAGGTACCCAGTGATCCTGTCCATTGAGAACCACTGCAGTG---------------------------- 5 Galeopterus_variegatus-NW_007727608.1-245539_246260 93.2% 59.6% -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGAAGGGG-----CAAA------GCAGA-------ATCAAGATTGACTTGGGGG----------------ACAGAAAGAGAGGGGCCCC-TCCCGGGAAAGCAGG----------------------------CCCCTAGGCTCTGTCTCAGGCCATGAGAAGGAGAGTGGCCATGGGGCCTCTGCAGGG-TGGCCGGCCGCTGGGATTGCAGGTGGGGACACACAGGTCTCCTTA-GCTGCTGAGGAGCTGGGGTC-TGCTGGGGTCTCAGAGCAGGGCTCCCACATTTAGCGT-------AATCTTGGCTGG---------TACCACATTCTTCCTGAGGCCCTGGCCGATCACAGGACTTGCCTGT------CTCTTGATCTGGTTCATGCCC------TCTTGGTTGGTTTACCTATTTTCTAAAAGGATCATGGTTGCCTTTTGGTAAAAATCCAAG-------------TAAAATGTGCACATGGCTA---AAAATAAATAATAA--TGCTGAAGAGCATATAATGAGAAGTC-CCATGCTGCCC-----CCCGAGTCTGCACTGTGTAGGTGATAACCACG-TTCTGCCAGATGGT-GTATGCCAG-------GCTCCTTC-TTTATGGGGCCAATGCCAGGACCCCAGGGCTATTCAAAGGATAGTCTCTTCAGTATTGAGGTCAAAAGGATTATATTTCTCACAATCTACCCATTGCTCCATGTTGCAACTCTGTGCAGTCC---------------------------------------------------------------------------------------------------------------------------------------GTGTCCTTTTTAAACCATCACCTTTTCAAAC-GTTTCCTTTTGTTTTCCTGGAGTTCCTAGTTGCCTTTGCTTTTTCTTATTGGGG---------AAGCTCGTGCCTTCCTTACCTTTCCCTAA-GATCTCCCAGCTCCTTTCCCACCCTCTGAATTACTT------CACAGTTGTTGGTGGGCCACCACCTGAAGCAGCTGGCAGCCCCACCTATCCTGG-TTTCTGGTGAAGACCCCTCTTCATTCAATGGTACAGGTGACCTGG-GCTCCTACAGAGGTGGAGCCTGGCCCTCCCCTGGGGCCCTGGCCTCACCCTC-TCCTCCCACATTGGGGCCACAGGTACCCAGTGATCCTGTCCATTGAGAACCACTGTAGTGTCATCCAGCAGAAG-------------- 6 Theropithecus_gelada-NC_037668.1-212962_213390 66.6% 39.3% TGCTGTCACTGTCTCAAGCCAGCCCCATCCCTGGGACTGTAGGTGGGGAAGGCATTACAGGGCACAGGGGTGGGGATAGGGGGAGGAAGGATGAGCCGGGAGG--AGCCAGGGGCCTGCTGGGATCTCAG--GACAGGGTTGCACCTGTGACCAGTGTAATTTGTGCAGGCACAATGTTTTCCTGTAGGCCCTGGGCTTCAGGCCTCAGTTTCTTGCCTGAGAAGTGGGGAGATGAGCCCCTGCACCCTGGTGCCCTGCCTGCCTGCTCCACATCACAGGACTTGCTCATCTCTTGCCCTG-------GTTAACCTCTTGTTCTGGGTCACTTACATTTTCTAAAATAATCATGGCTGCCTTTTGGTAAAAATCCAAGTAAAATGTATACATGGTTAAAAAAAATGAAGCTGAAAAGCTTCTAATTAAAAGTCCCTGGGC------TGGGCGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCTGAGACGGGCGGATCACAA-GGTCAGGAGA---TCGAGAC------CATCCTGACTCACACGGTGAAACCCCGTCTCT-------ACTAAAAAGTAC-AAAAAACTAGCTGGGTGAGGTGGCGGGCGCCTGTAGTCCCAGCTACTTGGGAGG------CT--GAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGCTTGCAGTGAGCTGA-----GATCG-TGCCACTGCACTCCAGCCTGGG-------------CGACAGCGCGAGACTCCGT---CT-------CAAAA--AAAAAAAAAAAAAAAAAAAAAAAGTC-CGTGCTACACT-----CCCCATTCTGCACTGTGCAGGTAATAACCATG-TTCCACCAGATGGT-GTGTGCCAGGCTTATGTCTCCTTC-TTTATGGGACCAATGTCAGGACCCCAGGGCCATTCAGAGGACAGTGTCCCCAGCATCTAGGTCAAAGGGATTCTATTTCCCAGCC--TATCTATTGCTCCACACTGTACCTTGGTTTTGTCC---------------------------------------------------------------------------------------------------------------------------------------ACATCGTTTTAAAACCATGACTTTTTCAAAC--GTTCCTTTTATTTTCCTGGAGTTTCTAGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 7 Tupaia_chinensis-NW_006198262.1-192843_193745 78.9% 44.3% ----------------------------------------------------------------------TGGGGCCTCTTCAGGGTAGATGGGCTTCT--------------------GGGATTAGCAG--GTGGCAAGGGCATCGTAGGGCATGGGAGACTGGG---ACACAC-------------------------AGATCTCCTGTAGCTGCTGAGGAGATAGGAATCT-----GAAGGGATCTC--------------------------------------------AGAACAGGGTATGCAGGGTAAT-CTTTGCAGGCACAG-----------CA-TTCTCCCTCAGGTTCTGGACTTTAG-GCTTCAGTTTT-----GT------GCCTCA-----GAAATGGAG--AGATGAGTGTCTCTGCCACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCT------TGCCTGTCCAACATCACAAGACATGCTCCTTTCT-----TGCTCTAGTTTCATGCCT---TCTTGATCTGGGTCATTTACATTTTCTGAAAGAACCATGGTTGCTTTTTGGTTAAAAAAACAAGCAAACAAACAAAAAAACAAAGTAAAATGTT-----CATATGGTTAAAAATAAATAAATAAATAAAGCTGAGGATTTCATAATGAAAAGT-----CCCATGCTGCACTGTGCAGGCAATAACCATG-TTGTGCCAGATGGT-GTGTGCCAGGCTTATGTCTCCTTC-TTTAAGGGGCCAATATCAGGACCCTAGAGCCATCAACAGGACAGTGTTCCCAGTATCTAGGTCAAAGGGATTATATTTCTCACAGTCTGTCCATTGCTCCATATTGCACCTCAGTTTAATCCATGCCATATTTAAACT---------------------------------------------------------------------------------------------------------------------------ATGTGTTTT------------TAAAATGCTTTCTTTT-GTTTTCCTGGAGTTTCTAATTGCCTTTGTTTTTTTCTTACTGGGGAAAACTCACATCTTCTTCACCTTTCACCTGTCCCTAA-GATCTCCCAGTTCCTTTCTCATCCATTTAGTTACTTTTAAAAGTCATTGG----TGAGCTACCTCTTGAAGCTGTTGGCAGCCCCATCTATCCTGGGCT-CCTGGTGAAGACC---CCTTATCAATGGTGCAAGTGACTTGG-ACTCCTACAGAGATGGTGCCTAGCCCTCCGCTGGATTTTTGGTTTCAT-CATACTCCTCCCATCTTGGACCTCAGGTACCCAGTGATTCTGTCCATTGAGAACCACTGCAGTGTA-------------------------- 8 Ceratotherium_simum-NW_004454172.1-192396_193149 79.8% 44.7% -----------------------------------------------------------------------------C-------TGTGGCTTGGTGGTTAAGTGCGCGCGCTGC-----GATGCTGGTG--GCCCGGG-TTCGGATCCCGGGTG-CGCATCGAG------GCAC-------------------------CACTTCTCCGTTCATCCTGAG--GCCGAGTCCCG-----CAT-AC------------------AG---CAACTAGAAGGAT-GTGCAGC-TACGACAT----------ACAACTAT-CCACTGGGGCTTTGGGGG-------GAAAAAATAAAATAAATAAAATCTTTAA-A-AAAAAAAAA-----AA------AAAAAA-----GAAATGGGG--GGATGAATTCCTTCATCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCCCTGCTT-GCCCGCCTGCATCACAGGACTTGTCCAT------CTCTTGCTCTGGTTCATGACC---TCTAAGTCTGGGTCACCTACATTTTCTAAAAGGATTATGTTGCCTTTTGGCAAAAATCCAAGT--------------AAAATGTGCACATGG-TT--AAAAAAAATAAATCAAACAACTGAGGAATTTATAATGAAATCCCCGTGCTGCACTCCCCATTCTGCAC-----CATGCG-GTGATAACAATG-TTCCGCCAGGTGGT-GTGTGCCAGGCTTATGTCTCCTTC-TCTGTGGTGCCAATGTTGGAACCCCAGGGCCATCCACAGGACGGTGTCTCCAATATCTAGGCAAGTGGGATTGTCTTGCACACAGTCTGTCCATCACGTCACGTTGCATCTCAGTTTAGTCTGCATCATTTTTAAAC-------------------------------------------------------------------------------------------------------------------------------CATGACTTACTGACTTGCTCGAATGTTTCCTTTT-GTTTTCCTGGAGTTTCTAATCACCTTTGA----TTTTTCTTATTGGGA----GAAGTACGTGCCTTCTCTACCTGTTCCTAA-GATCTCCC-AGTCCTTTTGCACCCACTCAGTTGCTTTTCAAAGCTATTGT----TGAGCCC--TCCTGGAGTGGCCGGCAGCTCCATCTTTCCTGGGCTCCTGGTGAAGACCCCTCCTCATTCAGTGGTACAGGTGACCTGG-GGTCCTACATAGGTGGGGTCTAGACCTTCCCTGGCCTCACCCT-------TCTCCTC-CCACCTTGGGACCACAGGTACCCAGTGATCCTGTCCATCGAGAACCACTGCAGTGTCATCCAG-------------------- 9 Equus_asinus-NC_052181.1-192396_193282 78.2% 43.9% ----------------------------------------------------------------------AGTAGAAG-------TGAGGGAGGGGCCTCTGCAGGGCGGCCTGGCCTCTGGAATTGCAG--GTGAGAG--GCTGTCTCAGGGTG-GTGGTCTGGG---ACACAC-------------------------AGGTCTCCTGTAGATGCCGAGGGGCCAGGGACCT-----GCT-GG------------------GG---TCTCAGGACAGGC-TTGCACGTCACATGAC----------AGCATAAT-CTTCACAGGCACAGGGTT-------CTCCCCAGG------CCCTGAGCTCCAG-G-CTTCAGTCC-----CT------TGCAGG-----AGAAATGGG--GGATGAATTCCTTTGTCTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCCCTGCTTGCCCTCCACGCACCACGGGACTTGCCCCT------CTCTTGCTCTGGTTCATGACC---TCTAACTCTGGGTCACCCACATTTTCTAAAAGGATCACGTTGCCTTTTGGAAAAGATCCAAGT--------------AAAATGTGCAAATAG-TT--AAAAAAAATAAATAAGCAACTGAAGAA-CTTAAATGAAAAGCCCCGTGCTGCA---------------------CACAG-GTGGTAACGCTG-TCCCGCCAGACGGT-GTGTGCCAGGGCTCTGTCTCCTTC-TTTATGGG--CCAATGTTGGACTCCAGGGCCGTCCACAGGATGGTGGCTCCCGTGTCTAGGTCAATGGGACTGTCTCTCGCACAGTGTACGCGTCACATCACATTGCATCTCAGTTTGGTCCACATCGTCTTTAAAC-------------------------------------------------------------------------------------------------------------------------------CATGACCTGCTGGCTTGCTCGAATCTTTCCTTTT-GTTTTCCTGGAGTTTCTAATCACCTTTGT----TTTTTTTTATTGGGA----GAAATACATGCCCTCTTCACCCGTTCCTAA-GATCTCCC-AGTCCTTTCCCACCCTCTCAGTTGCTTTTCAAAGTCATTGG----TGAGCCCCCTCCCAAACTGGCCGGCAGCTCCATCTATCCGAGGCTCCCGGTGAAGACCCCTCCTCATTCAGTGGTGCAGGTGACCTGGGGGTCCTACATAGGTGGGGTCTAGCCCTTCCCTGGCCTTGCCCT-------TCTCCCC-CCACCTTGGGGCCACAGGTACCCAGTGATCCTGTCCATCGAGAACCACTGCAGTGTCATCCAGCAGA---------------- 10 Ailuropoda_melanoleuca-NC_048228.1-193987_194867 76.9% 44.2% -------------------------------------------------------------------------GGCTGCCAGAAGGGAGTGGGAGTGATAAGTGGCAGCC--TAGGCCCTAGAACTGCAG--GTGAGAGAGGCATCTCAGGGCAG-GGGAGGTGGG---ACAGAC-------------------------AGGTCTCT-GTACCTGCAAAGGACCCAGGGACCT-----GCTAGGGTCTTA--GGA-------CA-------------GGGCTCACGCCTAATGTGAGTTA------GCATAA--T-CCTTGCAGGCATAG-----------GGCTCTTCCCTAGGGCCTTGCGCTTTAG-GCTTCAGTCTC-----TT------GCCTGA-----GAAATGGGG--AGATGAGTACTTTTGC-CCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTCCTGTTTGCCCTCTCCACTTCACAGGACTTGCCTATCTCT------TGCTCTGATTCATGCCT---TCTAGGTCTGGGTCACCTATGTTTTCTAAAAAGATCATGTTA-CCTTTTGGCAAAAATCCAAA-------------TAAAATGTGCACTTGGTT----AAAAAATAATTCAAACAACTGAAGAGCATATAATGAAA-CCCCTATGTTATACTC-----CCCCTTCTGCACTACACAGGTAATAACAATG-CTTTACCAGATGGT-ATGTGCCTGGCTTATGTCTCCTTT-CCTATGGGGCCAGTGTTGGGACCCCAGAGCCATTCACAGGACCATGTCTCCAGTATCTAGGTC-ATGAGATGATCTTTCTC--AGTCTATTCATTGCTCCACATTTCTCCTCAGTGGAGTCCACATCATTTTTAAACC---------------------------------------------------------------------------------------------------------------------------ATGACTTGCTGAC----TTGCTTGAATGTTTCCTCTT-ATTTTCCTGGAGTTTCTAATTGCTTTTTTT---TTTTAATGGGATATGA-----ACTACATGCCTTCTTTACCTGTCCCTAA-AATCTCTCAGCTCCTTTCCTACCCACTCAGTTGCTTTTCAAAGCCATTGA----TGGGCCCCCTCCCAGAGTGGCTGGCAGTTCCATCTATCCTGGTTG-TTGGTGAAATC-------------------------CCTTGA-TGTCTTACACAGGTGGGGCCTAGCCCTCTGCTGGCTTCACTCT-------GACTCTTCCACCTTG-GGGCTACAGGTACCCAGTGATCCTGTCCATTGAGAACCACTGTAGTGTCATCCAGCAGAAGA------------- 11 Neomonachus_schauinslandi-NC_058406.1-192396_192996 79.2% 42.8% -------------------------------------------------------------------------------------------GAAATGGGGAGATGAATACTTTTGCCCCAAGGCCTGTCT--GCCCTTTCCACAT--C-----AC-GGGA-CTTGC---CCATCT-------------------------CTTGCTCTGATTCATGCCCTCTAGGTCTGGGTCA-----CCTACGTTTTCT--AAA-------AA-------------GATCATGTTACCTTTGGGCAAAAATCCAAGTAAAA--T-GTGCACTTGGTTAA-----------AAAACAAATCAGGGCGCCTG-----GGT-GGCTCAGTTGG-----TT------AAGCGA-----CTGCCTTCG---GCTCAGGTCATGATC-CTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTCCCGGGATTGAGTCCTGCATCGGGCTCCCTGCTTGGCGGG------GAGTCTGCTTCTCCCTC---T--GA-CCCTCCTCCCTCTCATGCTCTCTCTCTCTCATTCTCTCTGTCTCAAATAAATAAATA-------------AAATCTTAAAAAAAAACA----AAAAACCAAATCAAACGACTGAAGAGCATATAATGAAAATCCCTATGTTATACTC-----CCCATTCTGCGCTACATAGGTAATAACAATG-TTCTACCAGATGGT-ATGTGCCCAGCTTATGTCTCCTTT-CTTATGGGGCCAATGTTGGGACCCCAGAGCCATTCACAGGACAGTGTCTCCAGTATCTAGGTCAATGAGATTATCTTTCTC--AGTCTATTCATTGCTTCACGTTGCACCTCAGTTGAGTCCACATCAGTTTTAAACC---------------------------------------------------------------------------------------------------------------------------ATGACTTGATGAC----TTGCTCCAAAATTTCCTCTT-GTTTTCCTGGAGTTTCTAATTGCCTTTGTTTTTTCTTATTGGGATATGG-----ACTGCATGCCTTCTTTATCTGTCCCTAA-AATCTCCCAGCTCCTTTCCCACCCACTCAGTGGCTTTTCAAAGCCCTTGA----TGGACCCCCTCCTGGAGTGGCTGGCAGTTCCATCTATCCTGGTTA-TTGGTAAAGATCTCTTTTCATTCACTGGTGCAGGTGACTTGA-GGTTTTACACAGGTGGGGTCTTGCCCTCCCCTGGCTTCACTCT-------GCTCCTTCCACCTTG-GGGCCACAGGTACCCAGTGATCCTGTCCATTGAGAACCACTGCAGTGTCATCCAACA------------------ 12 Camelus_dromedarius-NC_044523.1-193905_194764 76.2% 42.0% -------------------------------------------------------------GCCCCT-CTAGGAGGATCCG---GCCCAGGCTCTGGGAGTGGGAGAGAGCCTGGCCTCTGGAATTGCTG--GTGAGGGGGGGCGTCTCAGGGCA-GGGGGCTGGG---ACACAC-------------------------AGGTCTCCTGTAGCTGTCGAGGAGCCAGGGGCCT-----GCT-GG------------------GG---TCTCAGGGTGGGGCTTGTGCCTTACCTGCC----------AGCACAAT-CTTTGCAGGCACAGGGTT---------CCCCCGGAC--------------------CTCAGTCCC-----TT------GCCTGA-----GAAATGGGG--AGACGAGCACCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCCATGCCCTGCCTCTCTGCATCACGGGGCTCGCCCAT------CTCTTGCTCTAGTTTATGACT---TGTAGGTTGGAGTCACTTACCTTTTCTAAAAGGATCACATTGCTTTTTGGCAAAACCCCAAGT--------------AAATGTATACATGGC-TG---AAAAAATAATTGAAGAA---------GTTATCATGAAAATCCCCATGCTGCACTGCATTCCTCATCCTGTACCATGCAGGCAGTAGTGATGTTCCCCCCAGATCGT-GTGTGCCAGG-----------CT--ATGGGGGGGCCGATGTTGGGACCCCAGGGCCATGCACAGGACAGTGTCTCCAGTAAATAGGTGAATGGGATTATCTTTCTCACAGTTGATCCATTGTTCCACGTTGCGCCTCATTTTA---------------------------------------------------------------------------------------------------------------------------------------GTTCACATCATTTTTAAACCATGACTTGCTTGAACGTTTCCTTTTGTTTTTCCCGGAGTTTCTATTGCCTTTGTT------TTTCTTATTGGGA----GAAGTGCATGTCTTCTTCACCCACCCCTAA-GATCTCCCAGCTTCTTTCCCACACACTCAGTTGCTTTTGAAAGCCATGAT----AGC--CCCCTCCCAGAGTGGCTGGCAGCCCCTTCTATCTCGGGCTCCTGGTGAAGATCCCTCCTCATTCAGTGGTGCAGGTGGCCTGG-GGTCCTACATCGGTGGGGCCTAGCTTTCCCCTGGCCTCACCCT-------GCTCCTT-CCACCTTGGGGC--CAGGTATCCAGTGATCCTGTCCATTGAGAACCACTGCAGTGTCATCCAGCAGAAGAAGATGGCCCAG-- 13 Leopardus_geoffroyi-NC_059328.1-194534_195121 78.8% 41.7% ------------------------------------------------------------------------------------------CTGAGAAGTAGGGAGAATACCTTCCCGCCAAGTCCTGTTT----------GCCCTCTCTGCACCA-CAGGACTCGC---CCATCT-------------------------CTTGCTCTGATTCATGCCATCTAGGTCTGGGTCA-----CCTACATTTTCT--AAA-------AG-------------GATCATGTTGCCTTTCGACAAAAATCCAAGTAAAA--T-GTGCATACGGTTAA-----------AAAAATAAATCAAACAGGGGTGCCTGGG-TGGCCAGTTAA-----GT------CCAACT-----TTG---------GCTCGGGTCATGATCTCAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTCGTGGGTTCAAGCCCCATGTCGGGCTTTCTGCG---CACA------GAGCCCACTTTGGATCC---TCTGTCTCCCTCTCTCTCTGCCCCTCCTCTACTCACGTTCTC-TCTCCTCTCTCAAAAATAAA-------------TAAACGTTAAAAAAATTT----AATAAATAAATCAAACAACTGAGGAATGTGTAATGAAAATGCCCATGCTACACTC-----CCCATTCTGCACTATGAAGGTAATAACAATG-TTCTACCAGATGGA-ATGTGCCAGGCTTATGTCTCCTTTTCTTATGTGGCCGATGTTGGGACCCCAGAGCCATTCACAGGACAGTGTCTCCAGTATCTAGGTCAATGAGATTATTTTTCTC--AGTCTAGTCATTGTTCCATATTGCACCT--GTTTAGTTCACATTATTTTTAAACC---------------------------------------------------------------------------------------------------------------------------ATGACTAGCTGAC----TTGCTTGCATGTTTCCTTTT-GTTTTCCTGGAGTTTCTAATTGCCTTTGTTTTTTCTTATTGGGCTATGA-----ATTGCATGCCTTCTTTACCTGTCCCTAA-CATCTCCCAGATCCTTTCCCACCCATGCAGTTGCTTTTCAAAGCCATCGA----TGGGCCCCTTCTCAGAGTGGCTGTCAGTTCCATCTATCCTGGCTG-CTGGTGAAGGTCTCTTTTCATTCACTGGTGCAGGTGACTTGA-GGTCTTACACATTTGGGGGCCTAGCCCTCCCCTGGCTTATTCT-------GCTCCTTCCACCTTG-GGGCCACAGGTACCCAGTGATCCTGTCCATTGAGAACCACTGCAGTGTTATCCAACA------------------ 14 Hyaena_hyaena-NW_024080942.1-194766_195345 79.5% 42.2% --------------------------------------------------------------------------------------------------------------------GGTTCAAGCTGCAT--GTCGGGCTTTCTGCGCATAGAGC-CCACTTTGGA---TCCTCT-------------------------GTCTCTCTCTCTGC--CCTTC----CTCCACTCA-----CATTCTCTCTCCTCTCT-------CA---AAAATAAATAAACATTAAAAAATTTTAAGTAAG--GGGTGCCTGGGTA-GCTCAGTCGGTTAA-----------GCGTCCAACTTCAGCTCAGG-TCATGAT-CTCACAGTTCG-----TG------GGTTCG-----AGC---CCC--ACGTTGGGCTCTGTGCTGACAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTCAGAGCCTGGAGCCTGCTTTAGAATCTGTATCTCCCTCTCTCTCTGACCCTCCCCTGCTCAT---GCTGTCTCTCTCTCTCTCTCTCTCTCTCAGAAATAAATAAAACATTTTAAAAAATCAAAATTC-------------AAAAAATAAAAATTTTTA----AGTAAATAAATCAAATAACTAAGGAATATGTAATGACAATTCCCATGCTACACTC-----CCCATTCTGCACTATGAAGGTAATAACAATG-TTCTACCAGGTGGT-ATGTGCCAGGCTTATGTCTCCTCTTCTTACGGAGCCAATGTTGGGACCCCAGAGCCATTCACAGTACAGTGTCTCCAGTATCTAGGTCAATGAGATTATTTTTCTC--AGTATATTCATTGTTCCATATTGCACCT--GTTTAGTCCACATCATTTTTAAACC---------------------------------------------------------------------------------------------------------------------------ATGACCTGCTGAC----TTGCTTAAATGTTTCCTTTT-GTTTTCCTGGAGTTTCTAATTGCCTTTGTTTTTTCTTATTGGGCTATGA-----ATGGCATGCTTTCTTTACCTGTCTCTAA-AATCTCCCAGCTCCTTTCCCACCCACTC-------TTTCAAAGCCATTGA----TGGACCCCCTCCCAGAGTGGCTGTCAGTTCCATCCATCCTGGCTG-CTGGTGAAGATCTCTTTTCATTCACTGGCGCAAGTGACTTGA-GGTCTTACACAGGTGGGGCCTAGCCTTCCCCT-GGCTTACTCT-------GCTCATTCAACTTTG-GGACCACAGGTACCCAGTGATCCTGTCCATTGAGAACCACTGCAGTGTCATCCAACAAAAG-------------- 15 Castor_canadensis-NW_017871110.1-176298_177031 93.1% 56.1% -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCTAA-------ATAAGGCTCTTGGTGTGGATGGAGCTGATT-----GAATGAAGGAAGAGGCAGA---------AGCCAGG-------TGAACTTA--GGAAATCAAAATGGCTGGGTGGGGAAGGGGAGGG-TGGACGTGAAGTGGC-TGGGGGTG----GTGTTGCAGGTGGGGG---CAGCT---GGG--GGGCACACAGTTCTCCTCTAACTGCTGGGGCCTTGGGGCAGAGCTCACACTTCATCTACCAGCTTCATCTTTGT-AGG-------CCTCT--TGCCTACGTACTTTTGCCCCAATCCCTTCTTACCCTCTCCACAT-CCCTTGACTGTCCAT------CTCTTGCTCTGGTTCTTGCCC---TCTTGGCCTGGGTCACCTATATTTTCTAAAAGAATCATGGTTGCCTTATTGTAAAAATCAAAG-------------TGAAATGAGCACATGGATA---AAAACAAATAAAAC--TGAAGACC--TTGTATTGCACGGTCC-CATGCTGTACT-----CCCTATTCTGCACCCTGTAGGTCATAACTGTG-TTCTGTTAGATGGT-GTGGGCCGGT----TCATGTCTCC-TTTATGGGGTCAATGTCAGAACCCCAGAATCATTCATCGAACAGT---------GTCTAGGTCGGAGGGAATATGTTTCTTTTAGTCTATCTGTTGCTCTA--------CATTGCTTAGTCC---------------------------------------------------------------------------------------------------------------------------------------ATGACATTTTTTAAACCATGGCTTTGTCAAATGTTTCCTTTTGTTTTCCTGGAGTTTCTAGTTGCCTTTGCTTCTTCTCATTGGGGA--AA---GAAGGACATGCCTTCTTTACTTGCCCC--AAGATCTCCCATCTCCTTTCCTACCCATTCATTTGTTTTTAAAAGCTCATGG----TTGGCCACCTCTTA-AAGAGTCGGCATACCCACCCATGTCCTGGGCTTGGTGAAAACTCTTCCTCACCCAATGGTATGGGTGACCTGG-GCTCCTATATACGTGGGGTCTAGCCCTCCCCTGGGATCTTGGCCTTATCCCACTCCTCTTGCTTTGGGACCACAGATACCCAGTGATCCTGTCCATTGAGAACCACTGTAGTGTTGTCCAGCAAAAGAAGA---------- 16 Suricata_suricatta-NC_043707.1-194758_195319 76.6% 38.5% --------------------------------------------------------------------------------------CAGCTTAAGTCGTGATCTCA-TGGTTTGTAGATTCAAGCTACAT--GTTGGGCTTTCTGCTCAGAGAGC-CTGCTTTGGA---TTTTCT-------------------------GTCTCCCTCTCTCTTTGCCTCTCC--TCCACTCA-----CATTCTCTCTCT--TAT-------CA---GAAATAAATAAACATTAAAAATTTTTTAAGTAAATAAATCAAACAACT-AAGGAATGTGTAAT-----------GAAAATTCCCATGCTGGGGCACCTGGGT-GGCTCAGTTGA-----TT------GAGCGT-----CTG---ACC--AGCTCAGGTCATGATCCCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTCACAAGTTTGAGCCCTGCATTGGGCCCTGTGCTGACAGCA--CAG-AGGCTGGAGCCTGATTC---TCTGTCTCCCTCTCTCTGCTCTTCCCTCAGTCATGCTCTGTCTCTCTCTG-------------------------------------------------TCTCAAAAGTAAATAAACATTAAAAAATTAAAAAAAAAAGAAAGAAAGAAAATT-----CCCATTCTACACCAGGAAGATAATAACAATG-TTCTACCGGATGGC-ATGTGCCAGGCTTATGTCTCCTTTTCTTATGGGGCCAATGTTGGTACTTAAGAGCCATTCACAGGACAGTGCCTCCAGTATCTAGGTCAATGAGATTATTTTTCTC--AGTCTATTCATTGTTCTGTATTACACCT--GTTTAGTCCACATCATTTTAAAACC---------------------------------------------------------------------------------------------------------------------------ATGACTTGCTGAC----TTGCTTGAATATTTCCTTTT-GTTTTCCTGGAGTTTCTAATTGCCTTTGTTTTTTCTTATTGGGCTATGA-----ATTGCATGCCTTCTTTACCTGTCCCTAA-AATCTCCCAGCTCCTTTCCCATCCACTCAGTTGCTTTTCAAAGGCATTGA----TGGGTCCCTTCTCAGAGTGGCTGTCAGTTCCATCTATCCTGGCTG-CTGGTGAAGATCTCTTTTCATTCACTGGTACAGGTGACTTGA-GGTCTTAGACACGTGGGGCCTAGCCCTCTCCT-GGCTTATTCT-------GCTCATTCCACTTTG-GGACCCCAGGTACCCAGTGATCCTGTCCATTGAGAACCACTGCAGTGTCATCCAACAA----------------- 17 Loxodonta_africana-NW_003573446.1-174582_175352 90.3% 56.8% ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGGG--------CAGCTTGGGCTG-------TCTCAGCTACCGGGAGGGATGAAGGGAGGG-----TGCTTCAAGGC-AA-CCAGCCCCTGGGGCTGTAGGTGGGGAGGGTG-------------------GCTCGGGGCG-GGGGGCTCCTGCAGCTGCCAAGGAACCAGGGC-CAGCCAGCATCTCAGAAGAGGCATGCATCTCAGGTGCCCATGTTGTCTTTGTGGGCACCCTA----------GTCCCAC-CCCAAATGCTGGGCTCCAGGCCTCAGTCTCCAGCCTGAGAAATGCGAGAATGGGATGAGCACCTGTGCCGCAAGCCCTGCTTGTCCCCCCACACCACAGCACATGCCCAT------CTCTTGCTCTGGTTTGTGCCC-------TCTCCATCAAGGTCATATTTCCTAAAAGAACCATGACTACCTTTGGGTAAAACTCCAAG-------------GAAAATGTGCACATGGTTT---GAAAAAAAA-AAAACAAGCAGCAGAGCAAATAATGAAAAATTCTATGCTCCACT-----CCCTATTCTGC-ACTTGCAGATAACAGCCATG-TTCCACCAGATGGT-GTGTGCCAGGCTTATGTCTCTTC----CTTGGGGCCAATGTTGAGGCTCCAGGCCATCCAAGGG--CAGTGTCCCCAGTGTCTAGGTC-AAAGGGTCATCTTTCTCACCATCTGTCCATTGCTCTACAACATGTCTTGGTTTATTCT---------------------------------------------------------------------------------------------------------------------------------------GCATCATTTTTGAACCACAGATTTCTCAGAT-GTTGCCTTTTGTTTTCCTGGAGTTTCTAATTGCCTTTCTTTT--TTCTCACCAAGAGAT---GAAATGTGTGTCTTCTTTCCCTGTCCCTGA-GGTCTTCCAGCCCTTTTCCCATCTACTTAGTTGCTTTTCAAAGTCATTGGTG-----GGCCCCTCCTGGAGCAGCTGGCAGCCCTATCTGTCCAGGCCTCTTGATGGAGACCCCTCCTTGATCAGTGGTTCTGAG------------------------------------------GCCCTGGCTC--ACCCAGCTCCTCCTGCCTTGGGGCCACAGGTACCCAGTGATCCTATCCATTGAGAACCACTGCAGTGTCATCCAGCAGAAGAAGATGGCCCAG-- 18 Trichechus_manatus-NW_004444058.1-174895_175751 90.1% 55.9% ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGCCT---C-TCCTTGAACAG--------CAGCTCAGGCTG-------TCTCAGCTG-----------CTGGGAGGGA-----TACTACAAGGC-AG-CCAGCCCCTGGGGCTGCAGGTGGGGAGGGTG-------------------GCTTGGGGCA-TGGGGCTCCTGCAGCTGCCAAGGAACCAGAGC-CAGCTGTGGTCTCAGAATAGGCATGCATCTCAGGTGTCCACATCATCTTTGCAGACACCCAG----------TTCCCACCCCCAAACCCTGGGCTCCAGGCCTCAGTCTCCAGTCTGAGAAATGGGAAGATGGGATGAGTATCTGTGCCCCAAGCCCTTCTTGTTCCCCGACACCACAGCACTTGCCTAT------CTCTTGCTCTGGTTTGCGTCC-------TCTCCACC-AGGTCATATTTTCTAAAAGAACCACGAGTACCTTTGGGTAAAACTGCAAG-------------GAAAATGTGCACGTGGTTT---GAAAAAACA-------AACAGAAGAGCTTATAATGAAAAATTCCATGCTCCACT-----CCTTATTCTGC-ACCCACAGATAACAGCCATG-TTCTGCCAGATGGT-GTGTCCCAGGCTTATGTCTCCTTC-TCCATGAGGCCAATGTCGGAGCCCCAGGCCATCCAAGGG--CAGTGTCCCCAGTGTCTAGGTC-AAAGGGTCATCTTTCTTACCATCTGTCTATTGTTCCACGTTGTATCTCAGTTTAGTCT---------------------------------------------------------------------------------------------------------------------------------------GCATCGTTTTTGAACCATAGATTTCTCAGAT-GTTGCCTTTTGTTTTCCTGGAGTTTCTAATTGCTTTTCTTTT--TTCTTACTGAGAGAT---TAAGTGCATATCTTCTTTTTCTGTACCTGA-GGTCTCCCAGCCACTTTCCCACCCACTCAGTTGCTTTTCAAGGTCATTGGTG-----GGCCCCTCCTGGAGCAGCTGGCTGCCCTATCTGTCCAGGCCTCTTGATGAAGACCCCTCCTTGATATGTGGTTCTGAG------------------------------------------GCCCTGCCTC--ACCTAGCTCCTCCTGCCTTGGGGCCACAGGTACCCAGTGATCCTGTCCATTGAGAACCACTGCAGTGTCATCCAGCAGAAGAAGATGGCCCAGT- 19 Lontra_canadensis-NW_022631019.1-194066_194895 77.4% 40.4% ---------------------------------------------------------------CCCG-TGTGGGGCTGCCAGAAGGGAGTGGGAGTGCTGAGTGGCAGC-CTGGGC--CCAGAATTGCAG--GTGAGGGAGGCACGTCAGGGCAG-GGGAGCTGGG---ACAGAC-------------------------AGGCGTCTGGGGCC------------GCGGAGAA-----CCCGGGGTCTCA--GCA-------CC-------------GGGAGTGCAAGCTCTGGGCAC--------CAGCATGAT-CTTTGCCGGCAGAG-----------GGTTCTTCCCTAACGCCTTGGACGTCAG-GCTTCAGTTC------TA------GCCTGA-----GAAACGGGG--AGGTGAATACTTTTGCCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTCCTGT----GCCCTCCACGTCGCGGGGCTTGT----------CTCTTGCTCTGATTCGTGCCC---TCTAGGTCGGGGCCACCGACGTTTTCTAAAAAGATCATGTTA-TCTATTGGCAAAAGTCCAAG-------------TAAAATGTGCACTTGGTT----AAAAAGTAAATGAAACAGCTGAAGAGCATATAATGAAAATTCCTAG-TTGCACT------CCCTGTTCTGCACGGCACGGTAACACCAAGG-TTCTGCCCCATGGC-ATGGGCCCAGCTGATGTCTCCTTT-CTTATGGGGCCAGTGTTGGGGCCCTGGAGCCGTTCGCAGGACAGTCCCGTATCCAGG--CCAACCAGATT--GTCTTTCTC--AGTTGGTTCACCACTCCACGCCGCACCT--CCGTTGAGTCCATCATTTTTAAACC---------------------------------------------------------------------------------------------------------------------------ATGACTTGCTGAC----TTGCTTGAATGTGTCCCCTG-GTTTTCCTGGAGTTTCTAATTGCCTTTGTTTTTTCTTACTGGGATATGA-----ACTGTAGGCCTTCTTTATCTGTCCC------------AGCAACTTTCCCACCCACTCAGTTGCTTTTCAAAGCCATCGA----GGGGCCCCTTACCAGAGTGGCTGGCAGGTCCATCTATCCTGGCTG-CTGGG-AAGATCTT--TTCATTCACTGGTGCAGGTGACTTGA-GGTCTTAGGCAGGTGGGGCCTGGCCCTCCCCTGGCTTCACTCT-------GTTCTTTCCACGTTGGGGCCCACAGGTACCCAGTGATCCTGTCCATTGAAAATCACTGCAGTGTCATCCAACAGAAGAAG----------- 20 Orycteropus_afer-NW_006921723.1-174181_174954 90.0% 54.6% ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-TCCTGGAAGGA--------TAGCCTGGGTTG-------TCTCAGCTGGAGGGATGA----AGCAAGGG-----TACTTTAGGGC-AGCCCAGCCTCTAGGGCTGCAGGTAGA---------------------------------GGG-AACAGCTCCTATAGCTGCCAAGGAGCCAGAGC-CAG-CTGAATCTCAGGACAGGCACACACCTCAGTTGCCCGTATCATTTTTGTGGGCACCCTGGTTGCCCCCACCACCACCCCGGGACCCTGGGCTCCAAGTCTCAGTCTCTGACCTGAGAAATGGGAGGATGGGATGAGTACTTGTGTCCCAAGCCCTGCTTGCCACCACACACCACAGCATTTGATCAT------CTCTTGTTCTGGCTTATGCCC-------TCTCCATTAGGGTCACATTTTCTAAAAGAACCATGGATGCCTTTGGGTAAAACTCCAAG-------------GAAAATGTGCACATGGTGG---GAAAAACAAACTAACTAACTGAAGAGCTTATAATGAAAGGTCCCATGTTCAACT-----CCGTATTCTGT-ACCCACAAGTAACAGCCATG-TTCCACCAGATGAATGTATGCCAGGCTTTTGTCTCCTTC-TCCATGGGACCAATGTTGGGACCCA-GGCCATCCAAGG---GCAGTGTTCCAGTGTCTAGGTC-AAAAGTTCATATTTCTTACCATCTGTCTATTGTTCTACATCATGTCTCAGCTTAGTCT---------------------------------------------------------------------------------------------------------------------------------------GCATCATTTTTGAACCATAGATTTCTCAGAT-GTGCTTTTT-GTTTTCCTGGAGTTTCTAATTGCCTTTCTTTCTTTCCTTACTGAGAGAT---GAAATACATGTCTTCTTTCCCTGACCCTGA-GGTCTCACAACC-----CCAACCCACTCACTTGTTTTTCAAAGTCACTGGTG-----GGCCCCTCCTAGAGCAGCTGGCAGCCCCATCCATCCAGGCCTCTTAATGAAAATCCCTCCTTGATCAGTGGCACTGAG------------------------------------------GCCCTGACATCATCCCAGCTCCCCCTGCTTTGGGGTCACAGGTACCCAGTGATCCTGTCCATTGAGAACCACTGCAGTGTTGTCCAGCAGAAGAAGATGGCCCAG-- 21 Meles_meles-NC_060066.1-192846_193664 77.8% 41.5% ------------------------------------------------------------------G-CGTGGGGCTGCTGGAAGGAAGTGGGAGTGCGCCGTGGTAGCCCGGGCC--CCCGAATGGCAG--GTGAGGAAGGCATCTCAGGGCAG-GGGAGCTGAG---GCAGAC-------------------------AGGTGTCTGGAGCC------------GCGGAGAA-----CCCAGGGTCTCA--GCT-------CA-------------GGGCTTGCAAGTTCTGTGCAC--------CGGCACGAT-CTTTGCAGGCAGAG-----------AGTCCTTCCCTGGCGCCTTGGACTTTAG-GCTTCAGTCTC-----TC------ACCTGA-----GAAATGGGG--AGATGAATACTTTTGACCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTCCTGTTTGCCCTCTCCACATCACGGGACTTGT----------CTCTTGCTCTGATTCATGCCC---TCTAGGTCGGGGCCACCTACGTTTTCTAAAAAGATCATGTTA-CCTATTGGCAAAAATCCAAG-------------TAAAATGTGCACTTGGTT----AAAAAATAAATGAAACAGCCGCAGAGCATATAATGAAAATTCCTAG-TTGCCCT------CCCTGTTCTGCACTGCACGGTAACACCCATG-TTCTGCCCCATGGC-ATGGGCCCGGCTGATGTCTCCTTT-CTTATGGGGCCAGTGTTGGGGCCCCGGGGCCGTTCACAGGACCATGTCTCCGGTATCCAGGTCGACCAGA--TTCTTTTTC--CGTCGGTTCACTGCTCCGCGTCGCCCCT--CCGTTGAGCCCATCATTTTTAAACC---------------------------------------------------------------------------------------------------------------------------ATGACTTGCTGAC----TTGCTTGAATGTGCCCCCTG-GTTTTCCTGGAGTTTCTAATTGCCTTTGTTTTTTCTCACCCGGACATGA-----ACTGCCTTCTT----TACCCGTCCC------------AGCCACCTTCCCTCCCAC-TCGGTGCTTTTCAAAGCCACTGA----AGGGCCCCTTCCCAGAGTGGTGGGCAGGTCCATCTGTCCTGGCTG-ATGGG-AAGATCTCTTCTCACTCCCTGGTACAGGTGACTTGA-GGTCTTGGGCAGGTGGGGCCTGGCCCTCCCCCAGCTTCACTCT-------GTTCTTTGCGCATCGGGGCCCACAGGTTCCCAGTGATCCTGTCCATCGAGAACCACTGCAGTGTTGCCCAGCAGAAGA------------- 22 Hipposideros_armiger-NW_017731634.1-178375_179112 75.9% 38.8% ------------------------------------------------------------------G-GGAGGAAAAGCAA---GACTGATTTAGGAACTAGA--AGCAGAGTGGCCCCTCCCAAAAGAGCTGGCTCTGTCTTGGCTGCAGGGAG-GAAGTG------------G-------------------------GGGTGAGCAGTCTCTGCAGAGCAGCCTAGCCCCT-----GGG-GTGGCAGGTGAGG-----GGCA---TCTGGGGACAGGG-CTGGGACTCACAGCCC----------CCAG-----CTGCCAAGAAGGCAGGTG-------CCTGCTGGGGTCTAACAGGGTGTACACG-TCACGGCTGCA-----TA------GCCTGA-----GAAATGGGGCGATGATGAGTTCCTTGGCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTCCAGCTTGCCGTCTCAACATCCTAGGACTTGCCCTG------TCTGTGTTCTGGTCCACATCC---TCTAGGTCTGGGGGATCTACATTTTCTGAAAGCATCACGTTGCCTTTTGTCAAAAAATCCAAG--------------TAAAATGTGCATATGGTT--AAAAACAATCAAA---CAACTGAAGAACTCAT-AGCAAAAGCCC-TTCCCACAAT-------------------ACGCCGGCACTGCTGACC-TTCCTCCAGATGGT-GTGTAT---------------CGG-CTGCCTCCTCCATTGTGGGGACCCCAGGGCCACCCACAGGACAGGGTCTCTAGTAGCTAGGTCGGTGGGGTTACCTTTCTCACAGTGCACCAATTGCTCCACATCGCACCCCAGTTTAGTCCACATCACTTATGAA-------------------------------------------------------------------------------------------------------------------------------CTGTGACTTGCTGACTTATTTGAATGTTTCCTTTT-GTTTTTTTGGAGTTTCTAATTGCTTTT--GATTTTCTTATTGAAGAAA----GAAGTGCATATCTCCCTTACCTGTCCCTGA-GATCTGCCAGCTCCTTTCCCACCCACTAAGTTGTTTTTCAAAGCCATTGA----TGGGCCCCCTTC-CGCGTGGCTGGCAGCCCCATCTAGCCTGGGCTCCTGGTGGAGACCTCTTCTCACTCACG-----------------------GTGTAGGTGACCTGGGGTCTTCCCCTGGCCTCACCCT-------GCTCTTC-CCACCTTGGGGCCACAGGTACCCAGTGATCCTGTCCATCGAGAACCACTGCAGTGTCGTGCAGCAGCAGAAGATGGCCCAGTA 23 Balaenoptera_acutorostrata-NW_006725355.1-192396_192766 77.6% 44.3% -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCT-----GCT-GG------------------GG---TCTCAGGACGGGGCTTGCACCTCCCGTGCC----------AGCATAAT-CTTTGTGGGCACAAGGTT-------CTCCCCCCGGC--------------------CTCGGTCCC-----CT------GACTGG-----GAAACGGGG--AGGGGAGCACCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCCAGGCCGTGCCTCTCCACATCGCAGGACTCGCCCAT------CTCTTGCTCTAGTTGATGACT---TCTAGGTCTGGGTCGTTTACATTTTCTAAAAGGATTATGTTGCCTTTTGGCAAAAATCCAAGT--------------AAATGTGCACATGAC-TG---AAAAAATAAACCAAACAACTGAAGAACTTGTCATGAAAATCCCCACGCTGCACCACGTAGGTAATAAT-------------------GATGTTCCC-CCAGATGGT-GTGTACCAGGCTAT-GTCTCCGT--CCTGACTGGGCCCACATTGGGCCCCAGGGCCATGCACAGGACAGTGTCTCCAGTATCTCGGTGAATGGGAGTATCTTTCTCACAGTCTATCCATTGCTCCACACTGCACCTCAGTGAAGTCCACATCATTTTTTTCTGGCCGTGCTGCGTGGCTTGTGGGATATTAGTTCCCCCACCAGAGGGGAACTCACCCTAACCCCGTGCTTCCTGCAGTGCAAGTGCAGAGCCCTAACCCTGGACCACCAGGGAGGTCCCCCACATCGTTTTCAAACCATGACTTGTTTGAACGTTTCCTTTTGTTTTTCCTGGAGTTTCTAATTGCCTTTGTTATTTTCTTATTAGGAGAA----GAAGTGCATTCCTTCTTTACCCATCCCTGA-GGTCTCCCAGCTCCTTTCCCCCACGCTCACTTGCTTTTGAAAGCCATTGG----TGGGCCCCCTCCCAGAGTGGCTGGCAGCCCCGTCTATCCTGGGCT-CCTGTGAAGATTCCTCCTCATTCAGTGGTGCAGGTGACCTGC-AGTCCTACGTAGGTGGGACCTAGCCTTCCCCTGGCCTCATTCT-------GTTCCTT-CCCTCTTGGTGCCACAGGTATCCAGTGATCCTGTCCCTCGAGAACCACTGCAGTGTCGTCCAGCAGAA--------------- 24 Miniopterus_natalensis-NW_015504651.1-681919_682798 76.8% 36.0% ----------------------------------------------------------------------GGGAGCGGGT----GGGAGCAAGTGATCTCCGCAGGGTGGCCTGGCCCCTGGGATGGCAG--GCGGGG-GGGCGTCTCGGGGGC--GAATGCGGGG---ACACAC-------------------------AGGCGTCCTGTAGCTGCCCAGGAGC-GGGTGCCT-----GCCGGGGTCTCA--GGA-------CA-------------GAGCTGACACC-TCACGGGC---------CGGCGCAGT-GTTTGCAGACACATCCGCCCC---ACAATCCCCAGGGGGGCCCCGGGCTTCAG-GCCTCACTCC------TT------GCCTGA-----GAAATGGGG--CAATGAGCACCTTCACCCCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGACCCTCTTGCCGTATCAGTATCACGGGACTTGCCCATCTCC---------TGCCCTGGCTCTGT---TCCAGGTCTGAGTGACCTACATCTTCTGAAAGGATCATGTTGCTTTTTGGTAAAATCCAAG---------------TAGAATCTACACAGGGTTTAAAAAAAAAAAAATCAAGCAACTGAAGAGCCCATAATGAAC---------------A-----------------------------GCCGGTGC-TGCACCCCCCGGGG-GCAGTGTTCTCCCAGGCGGTGCTTCCTGATGGGGCCAACGCTGGGTCCCCAGGGCCTTCCACAGGACAGCGTCTCCAGCATCTGGGTCCATGGGGTTACCTTTCTCACAGTCTGTCCATCGCTGCGCGTTGCACCCCCGTTTTGTCCGCATCGTTTATAAGCC---------------------------------------------------------------------------------------------------------------------------GTGATGTGACGTGTGACCCCCTTGAATGTTTCCCTTT-GTTTTCCAGGAGTTCTCAGTCGCCTTTGTTTTTCTCATGGGGTGGGGGGT----GGGGGAGTGAACACCTTCTCTACCCTGA-GGTCTTCCAGGTTCTCTCACACCTGCTCAGGTGCTTTTCCAAGCTGTTGA----TAGTCCCCT-CCTGGGGTGGCCGGCAGCCCCATGTATCCTGGGCT-CCTGG-TGGAGCCCTTTTTATTCAGTGGTACAGGTCACCTGG-GT-CCCACGCAGGTGGGGCCCAGCCCTCCCCTGGCCTCACCT--------GCTCCTC-CCACGGTGGGGCCACAGGTACCCAGTGATCCTGTCCATCGAGAACCACTGCAGTGTGGTCCAGCAGAAGA------------- 25 Pteropus_alecto-NW_006429611.1-198479_199205 77.7% 37.4% ----------------------------------------------------------------------AGGGGGCT--------------GCAGGCGGGGA--GGGAGGGAGCGGATTAACGAGGGAGGAGTGAGGCTGGCTGAGTGAGGCTG-GCTGAGTG------------------------------------AGGCTGGCTGGGAAAC---AGAAGCAGAGGCCCC-----CCTCGGGGCAGGGGCCC-----GGGA---TACCCAGGTCT---CCGGAGCTGCCGAGGA----------GCCAGGTGCCAGCTGGGGTCCCAGGCA---------GGGCCGGCGCTGTCTTCGCAGGCACG-GGCTCCCCCCA-----AG------GGCCGG-----GCTGGGCTGC-GGGCTTCACTGCCTTGCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCCAGTTTGCCCTCACAGCATCCCAGGGCTTGGCCGT------CTCTTGCTCCGGTCCATGTCC---TTTAGGTCTGAGTGACCTGCTTTTTCTGAAAGGATCACGTTGCCTTTTGGCAAAAAAATCCAA--------------GTAAAATGTGCACATGGT--TAACTGAGG----------------AACGTGTAAGGAAAAGCCCGGTCCACAGCC-CCTGCCGC--GC---GGGACGCGGGACGCCAGGCGGTGCGAGCCAGGTGGT-GCGTGCCAGGCGGTGCCC-CCTTC-GCTGCGGGGCCAGTGCCGGGACCCCAGGG-CCATCCCAGGACGGGGCCTCTGGTGTCGTGGTCCACGGGGTCCCCTTCCTCGTGGTCTCTCCGTCGCTCCACGTTGCGCCCCAGTCCAGCCCCC-----------------------------------------------------------------------------------------------------------------GC----------GCGTCATGGATAAACCACAGTTTGCCGACTTGCGCTGATGTTTCTTT-TCGTTTTTCTGGAGTTTCTAATTGCTGTTGT---TTTTCCTGTTGGGGAA----GAAGCGTGCGCCTCCTCCACTCGTCCCTAT-GACCCCCCGACTCCTTTCCCACCCACTCGGCTGCTTCTCGAAGCCGTCGG----CGGCCCCCCGCCCGGAGTGGCCGGCAGCCCCATCCACCCTGGGCTCCTGGTGCAGACCACTTCTCATTCGCCGGGGTCCTACA---------------------CGGGTGGGGCCCTCCCTGGCCTCACCCT-------GCTCCTC-CCGTCTTGGGGTGCCAGGTACCCAGTGATCCTGTCCATCGAGAACCACTGCAGTGTCATCCAGCAGAAGAAGATGGC------ clustal . : . . . . * . * *. . . . . . * * **** ****** . * |