Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%

                                                         cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .  ] 1523
 1 Target                                             100.0% 100.0%    -------------------------------------GT-----CTTTGGTGG------------TCAAGACA-GCTGGAGACGGCCCCAGTTTCAGAGCGCTGGGCCTCCCC-GCCCATCTGTACTGCATCCTCTCTGGGCCCTGCAGAGCC-----GAGAG-------------------------------------------------------------------------------AAGGAGCCTGCAGCCAGGCTGGAGGGGCT----CTGAGAAGTGGCATCAGCTTCGCTGTAGAGAAATCTGGAG-ATGGCTCCCATTGCCTGGCACGGCC-------TAATCAGAGAGAACTGCATGGTGGATAAACACTTGGCTTGAGGCTAATTTCATCAAACCTAAGATAAGGCTGGAAGTGGGCTGGACCCAGTG----------GGGCCTAATTGCCAGAG--TGCGCTGGGCGGGCAC-CGAGGCAGGCTCAGCCA--------------AAGTGCACGTTCAACAGCAGTGGCTTCCCTTTGTGGAAAGA-A---AAGATGCCACGTGACTGTGT-CAGGGGTG---TTCTAGGGTGGG-GCTCAGGCCC----------CGAGGGCCTCAC-----------TGTCCGAGCATT--TTTGTTCCTGCTCAGTGGTGAGTGGCTCACCCT---GGCACATAGCCACTCTGTGGAGGGGGCCGCATCTCTGCCCAGCTCAGCCACAGGCCCTGGGAGGGCCTCTGGCCTGG-------GCTTTGT-----------------------------------CCCATGGCCCCTGGGAGGGCCATCAGCCCAGGCTC--TGTCCCATGGGGGCCCTTTGAGCTGCAGTGTGTC-CCCTCATGGCTGTCCTGGGTGCAGTGAGTGGGCACCCCCAGACTTGGGGCTACCCTCACACCTCGCACCAGGCACCCCAGGGCT-TCATCTGGTGTGTGCTG-GGCCCAGTGCATGTGGCTTTAG-CTGGGCCCTTCATGCCACGCTGGCCTCATCCCAGCCTTGGTGTGGGCACACAGCCTG-TCCCTGGGGTCCTGACCCACCTTCAT-----GCCAAGCC----------------------------GTGGGTGTAGGGCGTGTGGCAGCCA-GGGCTCT-GCCCTGGGGACAGGGACAAAGGGGCTGATGGGGCCACCTGACTGGTGACTCCCCTGGCTCAGAGG-----GGATCCCAGGGGAGCTGGCACCACCACCCCTGGCCACCCCAGATCGTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 2 Papio_anubis-NC_044976.1-206447_207403              95.3%  82.2%    ---------------AGTGGAGGCCCAGTGGCCC-TGGC-----CTTTGGTGG------------TCAAGCCA-GGTGGAGATGGCCCCAGTTTCAGAGTGCTGGGCCTCCCC-GCCCGTCTGTGCTGCATCCTCTGTCGGCCCTGCAGAGCC-----GAGGG-------------------------------------------------------------------------AAG---AAGGAGCCTGCAGCCAGGCTGGAGGGGCT----CTGAGAAGTGGCATCAGCTTCACTGTAGAGAAATCTGGAA-ACAGCTCCCATTGCCTGGCACGGCC-------GAATCAGA--GACGTGCATGGTGGATAAACACTTGGCTTGAGGCTAATTTCATCAAACCTAAGATAAGGCTGGAAGTGGGCTGGACCCAGTG----------GGGCCTAATTGCCAAAGAGTGTGCTGGGTGGGCGC-CGAGGCAGGCTCGGCCG--------------AGGTACATGTTCAACAGCGGTGGCTTCCCTTTGTGGAAAGA-A---AAGATACCGCGTGACTGTCA-GGGGCGTT---CTAGGGTTGGGC-TCAGGCCCCC----------TGAGGGCCTCAC-----------TGTCCGAGCATT--TTTGTTCCTGCTCATTGGCGAGTGGCTCACCCT---GGCACACAGCCACTCTGGAAGGGC---TGCATCTCTGCCCAGCTTAGCCACAGGCCCTGG--------------------------------------------------------------------------------AAGGGCCACCAGCCCAGACTC--TGTCCCACGGGGACCCTTTGAGCTGCAGCCTGTCCCCTTCACGGCTGTCCTGGGTACAGTGAGTGGGCACCCCCAGACTTGGGGCTACCCTCACACCTTGCACCAGGCAACCCGGGGCT-TCATCTGGTGTTGCTGG-GTCCCAGTGCATGTGGCTTTAG-CTGGGCCCTTCATGCCATGCTGGCCTCATCCCAGCCTTAGTGTGGGCACACAGCCTG-TCCCTGGGGTCCTGACC----TTCAC-----GCTAAGCC----------------------------ATGGGTGTAGGGCATGCAGCAGCCA-GGGCTCT-GCCCTGGGGACAGGGACAAAGGGGGTGATGGGGCCACCCGACTAGTGACTCCCCTGGCACAGAGG-----GGATCCCAGGGGAGCTGGCACCACCACCCCTGGCCACCACAGATCGTGGCCCCAGGAGGAGGCAAGGCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 3 Callithrix_jacchus-NC_048389.1-187975_188734        92.2%  63.6%    --------CCTCCCCAAGGG-----AGCCCCAGG-CAGT-----GGAGGGCGA------------TCCTCAGTGTGGGCTGGCAGGCAGAGGTGGGGG-AGGGGGTGCTGGCAGGCAGAGGGGGAAGC-CTGCAGGTCTGGCTCTGGAGAGGAATGGTGGGGC-------------------------------------------------------------------------AGC---TGTGGCTCTCCGGTCACAGGCCTGGCACTCCAGCCTCGTGCAGTGGCCCTGGTGTTTGGTGGTCAAGCTAAAC-ATGGCTCGCATTGCCCGGCTGCC---------TAATCAGAGGGCCCTGCATGGTGGATAAAGACTTGGCTTGAGCTTCATTTCATCCAACCAAAGCTAAGGCTGGAAGTGGGCTGGACCCAGCG--------CGGGGCCTAATTGCCAAAGGGCACACTGGGTGGGCAC-CGAGGCAGGCTTGGCCA--------------AGGT-GTGGTTCAACAGCTGCAGCTTCCCTTTGTGGGAAGA-A---AAGATGCTGTGTGACTGTAT-CTGGGGTGTT-CTGGGGTTGGGC-TCAGGCCCCG----------CAAGGGCCTCAC-----------TGTCCAGGCAGT--TTTGCTCCTGCTCAGTGGAGAGTAGCTCACGCT---GGTGCACAG-CCTCTCCATGGAGGG--GCCCCATCTGCCCAGCTCAGCCACAGGC--------------------------------------------------------------------------------CTGGGGAGGGCCACCAGTCCAGGTTG--TGTCCCACGGGGCCCCTTTGAGTTGCAGTGTGTC-CCCTCACTGTTGTCCTGGGTGCAGTGAGTGGGCAGCCTCAGACTTGGAGCTGCCCTCACACCTCATGCCAAGCCCCC-----------------------TGGGCCCCAGTGTATGTGGCTCTAG-CTGGGTCCTTCATGCCATGCTGGCCTCATCCCAGCCTTGGCCTGGGCACACAGCCTG-GCCCTGGGGTCCTGACCTACCCCC-------------------------------------------ATGAGTCTAGGGCAGATGGCAGCCA-GGGCTCT-TTCCTGGGGACAGGGATGAAGGGGGTGATGGGGCCACCTGACCAGTGACCCCCTTGGCTCAGAGG-----GGACCCCAGGGGACCTGGCACCATCATCCCCTGCCACGCCAGATCATGGCCATGGGAGGCAAGGTTGGTCC-CAGGAGGCTGGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 4 Aotus_nancymaae-NW_018508829.1-108192_108949        92.5%  63.3%    TGGGTGGCGCTGGCTGA---------------GC-CAGC-----AAATC-AGG------------CCCAGGGGCCTTGCTGCTTTGCTGAGTCTTGGAAAGAGGGTTCTGTGGGTGAAAGCACCAGGCCCTGGGGTCCCTGACATGCACACATGCACACACAC-------------------------------------------------------------------------ACA---CGGGCACACACACAGGAGTGCCTGGCGCTCCAGCCCCGTGCAGTGGCCCTGGTGTTTGGTGGTCAAGCCAAAC-ATGGCTGGCATTGCCCAGCACGGCC-------TAATCAGAGAGCCCTGCATGGTGGATAAAGGCTTGGCTTCAGCTTCATTTCCTCCAACCGAAGCTAAGGCTGGAAGTGG-CTGGACCCAGAG--------CGGGGCGTAATTGCCAAAGGGCACGCTGGGTGGGCAC-TGAGGCAGGCTCGGCCA--------------GGGT-GCGGTTCAACAGCCGTGGCTTCCCTTTGTGGGAAGA-A---AAGTTGCTGCGTGACTGT---CCGGGGTGTT-CTGGGGTTGGGC-TCAGGCCCCC----------CGAGGGCCTCAC-----------CGTCCGGGCAGT--TTTGCTCCTGCTCAGTGGAGAGTGGCTCACGCT---GGTGCACAG-CCTCTCCATGGAGGG--GCCTCATCTGCCCAGCTCAGCCAC--------------------------------------------------------------------------------------------------AGGCCCAGACTG--TGTCCCACGGGGCCCCTTTGAGCTGTAGCATGTA-CCCTCATGGCTGTCCTGGGTGCAGTGAGTGGGCAGCCTCAGACTTGGGGCTGCCCTCACACCTCATGCCAGGCACCCTGGGACT-TCGTCTGGTGTGTGCTGGGCCCTGGCGTATGTGGCTCTAG-CTGGGTCCTTCATGCCATGCTGGCCTCATCCAAGCCTTGGCCTGGGCACACAACCTG-GCCCTAGGGTCCTGACCTACCTCT-------------------------------------------ATGGGTCTAGGGCAGGCGGTAGCCG-GGGCTCT-GTCCTGGGGACAGGGATGAAGGGGGTGATGGGGCCACCTGACCGT-GATCCCCCTGGCTCAGAGG-----GGACCCCAGGGGACCTGGCACCACCATCCCCTGCCACGCCAGATCAGATGGGAG----GCAAGGTTGGTCC-CAGGCGGCTGGTGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 5 Saimiri_boliviensis-NW_024100927.1-186978_187691    92.4%  61.9%    -GAGGGGTGCTGGCAGGTGGAGGTGGGGGGGTGC-TGGC-----AGGTGGAGG------------TGGGGGAGGGGTGCTGGCAG-GTGGAGGTTGGG-GAGGGGTGCTGGCAGGCGGAGGGGGAAGC-CTGCAGGTCTGGCTCTGGAGAGGA-AGGTGGGGC-------------------------------------------------------------------------AGC---TGCGGCTCTCCGGTCACGGGCCTGGCGCTCCAGCCCTGTGCAGTGGCCCTGGTGTTTGGTGGTCAAGCCAAAC-ACGGCTTGCATTGCCTGGAACAG---------TCTAAT--------------------CAGAGAGCGCTGCGCAGTTCATTTCATCCAACCGAAGCTAAGGCTGGAAGTGGGCTGGACCCAGCA--------TGGGGCCTAATTGCCAAAGGGCACGCTGGGTGGGCAC-CAAGGCAGGCTCGGCCA--------------AGGT-GCGGTTCAACAGCTGCTGCTTCCCTGTGTGGGAAGA-A---AAGATGCTGTGTGACTGTAT-CTGGGGTGCG-CTGGGGTTGGGC-TCAGGCCCCC----------TGAGGGCCTCTC-----------TATCCGGGCACT--TTTGCCCCTGCTTAGTGCAGAGTAGCTCATGCT---GTTGCACTAGCCTCTCTGCGGAGGG--GCCTCATCTGCCCAGCTTAGCCACAGGC--------------------------------------------------------------------------------CCTGGGAGGGCCACCGGCCCAGGCTG--TGTCCCACAGGGCCCCTTCGAGCTGCAGCGTGTC-CCCTCATGGCTGTCCTGGGTGCAGAGAGTGGGCAACCTCAGATTTGGGGCTGCCTTCACACCTCATGCCAGGCACCCTGGGGCT-TCGTCTGGTGTGTGCTGGGCCCCAGCGTATGTGGCTCTAG-CTGGGTCCTTCATGCCATGCTGGCCTCATCCCAGCATTGGCCTGGGCACACAGCCTG-GCCCTGGGGTCCTGACCTCCCTCC-------------------------------------------ATGGCTCTAGGGCGGGCGGCAGCCA-GGGCTCT-GTCCAGGGGACAGGGATGAAGGGGGTGATGGGGCCATCTGACCGGTGATCCCCTTGGCTCAGAGG-----GGACCCCAGGGGACCTGGCACCACCATCCCCGGCCACACCAGATCATGGCCATGGGAGGCCAGGTTGGTCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 6 Sapajus_apella-NW_022437067.1-183102_183442         76.2%  45.1%    ------------------------------------------------------------------GAGGGAGGGGTGCTGGCAG-GTGGAGGTGGGGGAGGGGGTGCTGGCAGGCGGAGGGGG-AAGCCTGCAGGTCTGGCTCTGGAGAGGAATGGTGGGGC-------------------------------------------------------------------------AGC---TGCGGCGCTCCGGTCACGGGCCTGGCGCCCCAGCCCTGTGCAGTGGCCCTGGTGTTTTGTGGTCAAGCCAAAC-ACGGCTCGCATTGGCTGGTACGGCC-------TAATCAGAGAGCCCTGAGTGGTGGGTAAAGACCTGGCTTGAGCTTCATTTCATCCAACCAAAGCTAAGGCTGGAAGTGGGCCGGACCCAGCG--------CGGGGCCTAATTGCCAAAGGGCACGCTGGGTGGGCAC-CGAGGCAGGCTCGGCCA--------------AGGT-GCAGTTCAACAGCTGCGGCTTCCCTTTGTGGGAAGA-A---AAGATGCTGTGACTGTAT---CTGGGGTGTT-CTGGGGTTGGGC-TCAGGCCCAC-----------GAGGGCTTCGC-----------TGTCCGGGCAGT--TTTGTTCCTGCTCAGCGGAGAGCAGCTCACGCT---GGTGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCTCTCCGTGGAGGGGCT-TCATCTGGTGTGTGCTGGGCCCCAGCGTATGTGGCTCTAG-CTGGGTCCTTCATGCCATGCTGGCCTCATCCCAGCCTTGGCCTGGGCACACATCCTG-GCCCTGGGGTCCTGACCTACCTCC-------------------------------------------ATGGGTCTAGGGCAGGCGGCAGCCA-GGGCTCT-GTCCTGGGGACAGGGATGAAGGGGGTGATGGGGCCACCTGACTGGTGATCCCTTTGGCTCAGAGG-----GGACCCCAGGGGACCTGGCATCACCATCCCCTGCCACGCCAGATCATGGCCATGGGAGGCAAGGTTGGTCC-CAGGTGGCTGGTGGCTGCTGCTGTCCATGGTGCTGAGCTGGTGCCAGTCCCTGCTCAGCTGAGGCACATCCCCAGGCTCAGGCGGTGCCCTCCTGTGGACTAGGACATGGGGCTGCCTGAGAGGCACGGCCTGCTCCCTCAACCCTGCTCTGGGCTCCTCCCAGG-CCCCCTTGGAGTCCCTGGGTGGGCTGCTGAG     
 7 Delphinapterus_leucas-NW_022098043.1-176520_176752  77.0%  34.3%    -----------------------------------------------------------GCTCAGTGCCAAGTGGGCGCTGTCCATGGTGGCCCCTGAGCACCTGGGCCTCCCTGCCCATCTGCACGGGGCCCTCTGTGGGCGCTCGGGAGCCCAGGGAAGGAGG-----GCTG--------ACCTCCAGCCG------------------------------------------------------GG------------CAGAGTGGCTCTGATAATTAGTA----ACAATTTTATGGTCGAGAAATCTCAATATTGTTTCCACTGCCTGGAACTGCCCTA----ATCAAAGGAGAGATCTGTATG-GTGGGTAACGAGTGGCTTGAGCGTAATTTCATTAAGCCTAAAATAACCGTGGAACATAGGCCAGGCCGCACCCTGGGCG---------------------------------GCTCTGAGGCCTGGCCCAGCAGCACAGCTCCGGCCGGCGTGAGCTTTTAGCCGCCACGGTTTCCCTTTGTGGAGAGG-A---GAGCGGCTGCATGACCACATAGACAGGCATTTCTGGGGCCGAGG------GCTCAGAGCCGCCTTTCGGG--CCCCTGAGGGCCTCGTCGTCACAGAGCATTTTCAGCCACCGCCTCGGCATGCTG-------------------------------------------------CCCAGCCCGGAGC-------CCGCGGA--GAGGCCAGATCACCCCGCATCTCT--GC-----------------------CCAGCTGCAGCCTCGGCCCCTGGGA-GGGCCTCCAGCC--CGACTCCGTCCCAGAGGGGCCCTTTGACCTGCAGCGAGTGCCCTGCCTGGGTC-----------CGTCCCACCAGCTCTAGACACAGGG-CTGCCCCCAAACCTGGCACA---GACACAGGGATCCTTATCTGGCATCCGCT-GGCCCCGTG-CAGGTGGCCCTGGGCTGGGCCCCTCATACCAAGCTGGCCCTGTCCTGGCCTTGGTGTGAGCACCCGGCATGGGCACCCGGGTCCTGGAGGGAGATGCTCGG-----------------------------------GCTGTGCT--------------------------------------------------GG-----GC-GCCCACCTAGGGGCCAAGCCACAGGGCCGGGGCAG-----------------------GCAGGGCAGCCTTCCCAG----GAGCCCTACTGTCTCTGGGGCCGGGGACATGGGGGTGGCTGTAGCCTGCA---------CCTGGCTCGCTGGTGATACTTCTGGTTCAGAGGGGGCCTCATTCCCATCTCCAG---------------------------------------------------------------------------CCACCCCAGA-----------------T------TGTG--     
 8 Hipposideros_armiger-NW_017731634.1-173075_173288   76.9%  29.5%    ---CTCTTTCTGGAGAGAAGTGAGTCGAGGGCTGTTGGCCTGGAACCACAGACCCCAGACCCTGGCTGGCGGGCCAGTGGAGACAGCCTGGTTCCTGAGTGCCCGGAGCTCCCTGCCCGTCAGCACAGCCGCCCTCAGCAGGCGCTCGGAACCCAGGGAG-GGAG-----GCTG--------ACCT-CGGCCA--------------------------------------------------------------------GGCAGAGTGGTTGACAGTCAGCA----TCAGTTTGCTTGTGCAGAAACGTCAGCATTGCTTCCACCCCTGGA-----GTTGC----CTGATCAGAGAGGCACGTGTG-GTGGGCGAAAAGTGGCTTGAACGTAATGTCATTAAGTCTAAGACGACAGTGGGGTATGGGCGAGGCCTCGCTGCCTACCCAGCACCCTGGGCTGGCTGCCAGCCCGGCTCT------------------------------------------------------------------------------------------------------GCTGGAGGCATTTCTGGGGCTGGCG------GGTTGGCTCCGCTT--TTAGGT---------------------CTCTTCATTCTCAGTCACCGCCAGGGGCAGCAGTTGGGTAGCAAGTAGGCAGGTACTCTGTTGTGCTGTGCTG---------CCTGGTACAGGG--------CCCCCGG--GAACCCAGATCGCCCTGTGGGCCAGATGCCCAACAGAACGGGCATCTCTGCCCAGCTCCAGTTACATCCCCTGGGA-GGGCTACCAGCC--TGGCTCTGTCCTGAAGGGGCCCTTTGACCTGCGCTGTGTACCCTGGCTTGTCT-----------GTCCTGCCAG--CGTCGGACACAGAGCTTCCCTCACACCTAGCACCAAGCACACCAGGGCCTTCGACAGACGTCAGGTGTGTCCCCAGCAC-GTGGCTCTGAGCTGAGCTCCTCACCCCAAGCTGGCCCCATCCCAGCCTTGGCACAGGCCCCCAGCATGAGCACTCAGGTTCTGGACTGAGACGCTGGG-----------------------------------GCCCCACC--------------------------------------------------GG-----GC-ACCCACCTCACTGCCATGCCACAGTGCCAGGGGCAAGCTGCAGCCAAGGGCACAGGTCAGGACCCAGCTTTCCCGG----GAGCCCTACTCTCAATAGGGACGGGGACACAGGGGTGGCTGTCGACACTT---------GAC---TCTCTGGAGATGCT-----------------------------------------------------------------------------------------------------------------------------------------------------     
 9 Molossus_molossus-NW_023425372.1-173365_173595      79.4%  32.1%    -------------------------------------------CCCCAGACCCTGGGCAGCTCAGACGCAAATGGCCATTGTGAGCGGGGGCTCCTGAGTGGCTGGGCCTCCCTGCCGGTCAGCCCGGCCTCCTCTGCCAGCTCGGA----GCCCAGGGCGGGAG-----GCTG--------ACCTCCGGTGA--------------------------------------------------------------------AGCAGTCACTCCGGTCGGCTGCC----TCAACTTGACTGTGGAGAAATCTCACTGTTGTGTCTGTCCCCCTGAAATGGCCTG----ATCACAGGGA---GATGTGTG-GTGGGCGGAGTCTGAACTGAT-------------------------GGGGGGTGTGTGGGCGGGGTCCAGCGTGGCCCTCCGGCCTCGGGGGCCTAAGGAATCCCTGGGC--------------------------------------CAGCTCCCAGCGGGGCTCCGCCTGGCCTGTTTGTGGGAAGA-A---AATCAGCATCGG--ACCACGTGGGGGGTGTTTCTGCGGC------TGGAGGTTCAGCTCCGTCCTTTCGGGTCTCAC-----------------GGAGCATTTTTATTCACCGCTGGGGACAGCAGCGGGGTGGTGAGCAAGCCGCCACTC-TGCATGGACTCCTGGCTGTGCGGCCCAGACAGAGC------------------CCAGTGGAGCAACCACCACCCTGTGGGCCGGACAGAATGGGCATCTGTGTCCAGCTCCAGCCATGCCCCCTGGGA-GGGCTGTCAGAC--AGGCTCTGTCCCAGAGGGGCCCTTTGACCTGCCCGAGCCT-GGTCTGTCCATC-----------TGTCCTGGTAGCTCTCGGACACAGGGCTTCCCTCAAACCCAGCACCAGACACACCAGGGCCTTTGTCTGGCATCTGCTGGGCCCCAGTGCATTGGGATCTGGGCTGGGGTCTTCCCACCAAGCTGGTCCTGCCCCAGCCTTGGCATGGGTACCTGCA-TGAGTACTCAGGTCCCGGAGCGAGATGCTGGG-----------------------------------GCCCC-------------------------------------------------------------------ACCGCAGTGCCAGGCCACAGGGCCGCGGGAGG-CAGCTGCCCAGGGCAGAGGTTGGA-CCCAGCTTTCCTGG----GAGCCCTACCCTTGTTGGCG-ATGGGACATGGGGATGGCTGGGGCCGCCT---------GGC---TCATTGATGATGATCCCGATTCAGAGGG---------------------------------------------------------------------------------------------------------------------------------------     
10 Ceratotherium_simum-NW_004454172.1-184133_184384    81.6%  33.3%    -------------------------------------------------GTCCACAG--------TGGTTGGGCCGTCAGAGACAGCTCTGGGCCTGAGCTCCTGGGCCTCCCTGCCCATCTGCACAGCGCCCTA---TGCTGGCACTCCGGAGCCCAGGGCGGG-----GCTG--------ACCTCCAGCCA------------------------------------------------------GG------------CAGAGCAGCTCTGATAATTAGCA----TCAATTTGGCTGTGGAGAAATCTCAATATTGTTTCCACCACCTGCAATT-GTCTA----ATCAAGAGAGAGATCTGTGTG-GCAGGTAAAGAGTGGTTTGAACATAATTTCATTAAGTCTAAGATGACAGTAGAATGTAGGCCAGGCCCAGTGTGGCCCTCAGGCTTCATTGCCTAGTAAGCACCCTGGGCCAGCGCCGTGGCCTGGCTCAGCAGAGGAGTCCAGGGCGGGGCGTGCGTTCAGCCGCTGCTGTTTCCATTTGTGGAAGGA-A---AAGCAGGCGCTCGACCACCTCAGGAGGCATTTCTGGGGCTGGGGGTTAGGGGTCAGATCCATCCTTTCGGGTTGCCTGAGAACCCTGTCG--------------------TCATAAAGCATTTCATTCGGGTGGTGAATGGGCAGCTACCCTGCCCTGGATTCCTGGCTGTGCCGCCCAGT--AGAGC-------CCG-GTG--GAGGCCAGATCACCCTGTGGGCTGGACGCTCGACAGAATGGGGAGCTCTGTCCGGCTCCAGCCATGCCGCCTGGGG-GGGCTACCACCC--AGGCTCTG-TCCCCAGGGGCCTTTTGACTTGCAACACATGCCCTGGCCCAGTC-----------TGTCCAGCCAGCTCTCAGAAGCAGAGCTGCCCCCTGAGACAGCACCAGATACACCGGGGTCTTCATC--TG-----GCACCTGCTGGGC--------------------CCCTCACACCAAGCTGGCCACCTCTGAGGCTTG-------------GCTTGGGCACTCGGGTCCTGGAGTGAGACACTGGG-----------------------------------GCCCCGCT--------------------------------------------------GG-----GT-GCCCATCTCCATGCCAAGCCACAGTGCCCGGGGAAGGCAGCAGCCAGGAGCACGGTCAGGG-TCCAGCCTTCCCGG----GATCCCTACTCTCAGTGGGGACAGGGACGTGGGGGTGGTTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
11 Castor_canadensis-NW_017871110.1-170245_170486      92.8%  45.6%    ------TTCCTGACCCA------------------TGGT-----GATTGGCCA------------TCCGGAGATGGCCCTGAGAT----------------GTCCGGTCTACCTGCCCATCTGTACAGCAGCCGCTGCAGGCACTCCAAGCGAAGGAAAGGAG-------------------------------------------------------------------------------ACACGGCCTCCAGCCAGGCTCAGGTCGCTGTGATAATTAGCAGT----GATTTGGTTGTAGAGAAATCTCGATATTGCTTCCGGCTGCCTGGAACTGCC-------TAATTGGGGCAGAGATCTGTGTAGTGGATACAGTGGTTTCAACATAATTTCATTACATCTAAGATAACACTGGAATGTGGGCTGCCCAGCACACTCGTCCTCGTGCCTAATTGCCCAGAAGCACCCATGGGCTGGCT-GAGGCCTGGCTGAGCAG--------------AGG----GCTTGGTGACAGGTGCCATCAGCTGCAAGGGTTT-C---CAGCTGCTGTGTGACTGTGT-CAGGAGGATCTCTGAGGCTGGAG-TCAGGCCTCC----------TGAGAGCCTCTG-----------CTTCACAGAACT--TCATTGGCTGCTGAGGGGCAGGGGCTCCACTCT---TAGCTACAGGCAGATACCTGTCCTGGCTCCTG----GCCGTGCTGCCCAGCACCCTAGGGCACAGCCACTTAGGTGG-------GCTCA-T-----------------------------------CTCAGGGAGAGTGG---CAGGGAGCGTGGCTCCTC--TGTCTCAGAGGGGCCTTTTGACTTGTGATGTGCATTG-GCCCTGTTGCCCTGG--GTAAGAGTGGTCAAGCCTCAGAATTAGGGCTGTCTGCCAATCTAGCACTAGATACACTGGGGTC-CCAGTGAGTGTCTGCTG-GGCCCAGTGCATGTGACTCTGG-CCCAG-----------------------------CCTTGATGTAGGCTCATGGCACAGGCACTGGAGTCATGCCACCAAGAAAGCTT--GGGACAGC----------------------------ACAAGTCAGGGCCTGCCTGCCCTGGGGCCCCCTCTCACTGAGGATAGGAATGTTGGGGTAGTGTGTTTGCCTTGCTCACCAGTGGTTCTGGCACAGAGA-----GGACCTTGGGAGACCTGTCCTT--------CAGCCACTCCAAGTTATGTGGCCCTGAGAGAG-------------------------------------------------------------------------------------------------------GCTATTCTATGACT------------------------------------------------------------------------------------------     
12 Manis_pentadactyla-NW_023457939.1-177151_177372     76.3%  32.9%    ------------------------------------------------------------------------------------------------------------------------------GCCTCCCTGCCTGTCTGCACGGCCGCCCACGGAAGGAGG-----GCTG--------ACCTCCAGTGA------------------------------------------------------GG------------CAGAGTAGCTCTGATAA--AAAC----ATCCATTGGTCGTCAAGAAATCTCAATATTGTTTCCACCACCTGGAATT-GCCTA----ATCAAAGGAGAGATCTGTGTA-GTGGGTCAAGAGTGGCTTGAACATAATTTTATTAAGTCTGAGAGAACAGCGGAATGTAGGCTAGGCCCAGTGTGGCCACAGACCTCATTGCCTAGTAAGCAC-CCTGGCCGGCTCT--GAGGCTGGCTCAGCAGGGCAG-CTCGGGCAGCGTGTGTCCTCGG----AGAGGCTTCCATTCACGGAAAGA-A---AAGCAGCTCCACGGCCACATGGGGAGGCGTTTCTGGTTT------TGAGGGTTCAGATCTGTCC-TTTGGGTCTCCTGAGAGCATTAGTGTCATAAACCT-TTCATTTCCTGCTGAGGGCCAGCAGCTGGGCAGTCATCTGGCAGCT-CCCTGCCCTGGACTCCTGGCTGCACTGCCTGGCACAGAGCC-------TG-GCA--TGAGGCCAGCCACCCTGTGGGCTGG-ATACTGACGAAATAGGCATTTCTGCCCAGCTCCAGCCACACCCCCGGGGA-GGCTACC-AGCC--TGCCTGTGCCCCAGAGGGGCTCTCTGACCTGCA--GTGTGACCCGGCCCTGTC-----------TATCCTGCCAGCTCCCAGATGTGGGGCTGCCT-CAAATCTAGCACCAGCCACACCAGGATTTTCATCTGACATCTGCTGGGCCCCAAAGCATGTGGCTCTGG-GATGGCCCCTCATGCCAAACTGGCCCTGCACCAGTGTTG-------------GCATGGGCACATTGGGTCCTGGAA-----------------------------------------------------T--------------------------------------------------GA-----GA-AGCTG-CCTCGTGACGAGCCGCAGT--------------GCTGGCATGTGTGCAGGTCGGG-GCCCAACCTTCCCA----GAGCCCAGCTCCTGCTAGGGATGGGGATGG-GGAGGCTGTGGCCACCTGG---------CTT---ACACTGGTGGTGCTCCCAGTTCAGAGGGGCCCTCAGGGACCTGGCACC---------------------------------------------------------------------------CACCCCGGCCAC----CC---C------------------     
13 Bubalus_bubalis-NC_059161.1-175794_176033           75.4%  31.0%    -----------------------------------------------------------GCTCTGCCCATAGTGGCTGTTGTCCCTGGTGTCCCCTGAGCACCTGGGCCTCCTGGCCCATCTGCATGGGGCCCTACGTGGGCACTTGGGGGCCCAGGGAAAGAGG-----GCTG--------ACATCCAGCCA------------------------------------------------------GG------------CAGAGCCACTCTGATAATTAACA----TCAATTTTATTGTCGAGAAATCTCAATATTGTTTCTACTGCCTGGAACTGCCCTA----ATCAAAGGATAGATCTGTGTG-GTGGGTAAAGAGAGGCTTGAGCATAATTTCATTAAGTCTAAAATAACAGTGGAATGTGGGCGAGGCTGGTGTGGCCCCTGGGCCTCCTGCATGATGAGCACC----CTGGGTGGCTCCAGGCCTGGCCCAGCAGTGTGGCTCCGGCCAGTGTATGCCTTCAGCCACGGCAGTTTCCTTTTGTGGAGAGG-A---GAGCAGCCACGGAACCACGTCGGAAGGAATTCCTCGGGCCCAGG------GGTTGGGGCCATCCCTTTGG--GTCCAGAGGGCCTCATCATCCCAAAGGGTTTTCAGTCGTGCCTTGGGTGTGCTG-------------------------------------------------CCCAGCTCAGAGC-------CCTCAGG--GAGGCCAGATGACCCTATGGGTGG--ATGCTCAGAATATGGGCATC-TCTCCCAGCTTCAGTCTCAGCCCCAGGAA-GGGCTCCCAGCC--TGGCTTTGTCCCCAAGAGGCCCTTTGACCTGCAGGGCGTGTCCTGCCAGCTCT-----------GA--------------GATGCAGGG-CCGCCCTCAAACTGGGCAGA---CACAGGG----TCCTCACTGGCATCTGCT-GGCCTCAGCACAGATGACTCTGGGCTGGG------------------TCCTGTTCCAGCCAAGGCATGGGCACCCCACCTGGGTGACTGGT-TCTGGAT-----GGACACA-----------------------------------GGCTTGCT--------------------------------------------------GG-----GT-GCCCACCTTGGTGTCAGGCCACAGGGTCAGGAAAGG----------------------CAGGGATAGACTTCCCGA----GAGCCCCACTCTCTCTGGGCTCGGGGACTTGGGGGTGGCTGTGGCCCCCT---------GGC---TCGTGGGTGATTTTCCTGATTCAGAGGGGCCTCTTTC--------CAG---------------------------------------------------------------------------CCATCCCAGA-----------------T------GGTGT-     
14 Manis_javanica-NW_023436200.1-177063_177282         77.6%  32.4%    ------------------------------------------------------------------------------------------------------------------------------GGCCCGCTCTGTGCCGGCTCCGGA-----GAATAGCCAG-----AAGG--------TCCAGGGGTGT------------------------------------------------------GG------------GCCTGGAGCTGACACCA--CACC----AGGCAGTTCAGACCCTGGCAGCCATGTCCCTGTGCCCGGGCCTCCCTGC-CTGTC----TGCACGGCCGCCCAGGGAAGG-AGGGCTCAAGAGTGGCTTGAACATAATTTTATGAAGTCTGAGAGAGCAGTGGAATGTAGGCTAGGCCCGGTGTGGCCACAGACCCCATTGCATAGTAAGCAC-CCTGGCCGGCTCT--GAGGCTGGCTCAGCAGGGCAG-CTCGGGCAGCGTGTGCCCTCGGCCGCCGAGGCTTCCATTCATGGAAAGA-A---AAGCAGCTCCACGGCCACATGGGGAGGTGTTTCTGGTTT------TGAGGGTTCAGATCTGTCC-TTTGGGTCTCCCGGGAGCATTAGTGTCATAAACCTTTTCATTTCCTGCTGAGGGCCAGCAGCTGGGCAGCCATCTGGCAGCT-CCCTGCCCTGTACTCCTGGCTGCACTGCCTGGCATAGAGCC-------TG-GCA--TGAGGCCAGCCACCCTGTGGGCTGA-ATACTGAGGGAATAGGCATTTCTGCCTAGCTCCAGCCACACCCCCGGGGA-GGCTACC-AGCC--TGGCTCTGCCCCAGAGGGGCTCTCTGACCCTCA--GTGTGACCCGGCCCTGTC-----------TCTCCTGCCAGCTCCCAGATGTAGGGCTGCCT-CAAACCTAGCACCAGCCACACCAGGATTTTTGTCTGACATCTGCCGGGCCCCAAAACATGTGGCTCTGG-GCTGGCCCCTCATGCCAAGCTGGCCCTGTCCCAGTGTTG-------------GCATGGGCATGTAGGTCCTGGAGTGAGAAGCTGGG-----------------------------------GCCCACTA--------------------------------------------------GG-----CC-CCCTC-CTCAGTGAAGAGCTGCAGT--------------GCCGGCATGTGTGCAGGTCGGG-GCCCAACCTTCCCA----GAGCCCAGCTCCTGCTAGGTATGGGGATGG-GGAGGCTGTGGCCACCTGG---------CTT---ACACTGGTGATGCTCCCAGTTCAGAGGGGGCCTCAGTGACTCGGC----------------------------------------------------------------------------------------------------------------------     
15 Propithecus_coquereli-NW_012152752.1-176115_176213  68.0%  22.6%    ----------------------------------------------------------------------------------------------------AAGTGGCCCTTCTCCACGGTGGTCAGGCC---------AG---CCGGTCTGG---GAGCACCTGGTCTG--------GGAGCACTTGGCCTCCCCGCCCACCTGTGCGGCCACCCTCTGTAGGTGCTCTGGGGCCGAGGGAGGGAAGAC-----GTGGCCTGCAGCCCAGTTCG------AGGG----TCTCTAACAATGTAGTAGAATCTCAATGTTGCCCTGAATTGCCTGATCG--------------GAGGGGAGTTCTGTGCAGTGGGCAAAGAGGCAGCTTGGACATAGTTTCATTGAATCGAACAGAGCATTGCAGATGTGGGCTGGGCCCAACGTGGGCCCAATTGCCCGAGAGT---------ACGCGTGGGCCGCTGAGGCCTGGCCCGGCAGCAGGGGCTTGGCTGAGGTGTTCCTGCAGGTGCG-CCG-------TTTCCACTGGTGGGAGGAACAGCCCTGTGACCACGC-TGGGGGCATTTCCGGGGCTG----------------------GATTCAGGCTTCCCAAGAGCCTCAGCATCGTAGCACCTTCCTT--CCTGCGTGGGG--------------CC-AGCAGGCAGATGCCGCCCTGGA--CTGCGGGCGTGGTGAGCAGTG-----------------------G-AGCTGGCCGACCCTGG---------------------GCACAGCCACTCAGGGCCCTGGCCACGGCCCCTGGGA-GGGTCACCCTCCCAGCTCCCTGTCCCAGAGGGGTCCTTGGCGCTCCAGCGTGTGCCCTGACCCAGCT-----------GTCCTGGG-----------TGCAGTGAGCAGC-TGGCTCTCGGCCCAGAC-CCACCAGGTC---TTCTGGCATCTGCTGGGCC---------------------------CCAGCACATGTGGCTCA-----AGC-----------------CTTGGCGTGAGCACTTGGTCCTGCTGGGCG------------------------------------------------------------------------------------------------------------------------TCCACCAGGCCACGGTGCCAGGGAAGTACCGCAGCCAGGAGCGCCCGTCAAGGCCTGGCCTGCCCCA----GAGCCCACTCCACTGGGGA--CAGGGAAGCAGGG--GGTTGTGGC--CAC---------ATT---GCTCTTGAGAGTCTCCTGGCTCAGAGGGGACCTGGCACCACCAGCCCA-----------GACCG-TTGCCACGT---------GGGGAGTC------------------GCTCCCGTGGCTGGCAGGCCAGAGTGTGCTGCTGTCCATGGT------GCTGG-     
16 Leopardus_geoffroyi-NC_059328.1-188049_188299       74.8%  29.0%    ------------------------------------------------GGTAGCTCA--------GACCCCAGCAGCCTTGTCCACGGTAGTCCCTGAGTGCCTGGGCCTCCCTGGCCATCTTTGCGGCCGACCT-TGCGGGGCTCTGGACCCCAGAGAACGAGG-----GCTG--------GCCTCCAGCCA------------------------------------------------------GG------------CAGAGCAGCTCTGATAATTAGCA----TCAGTCCGGTGGTCGAGGAGTCTCTGTATTGTTTCCACCACCTGGAAGT-GCCTA----ATCAAAGGAGAGATCTGTGTG-GTGGGTAAAGAGCGCCTTGAACATAGTTTCATTAAGTCTGAGATAACAGTGGAGAGCAGGCCCAGTGTGGGCCTCGGGCCGCAGAGCAGCT---------------------------------------------------CCAGCCGAGCGTGCCTTCACCTGCTGCAGTCACGGTCTGTGGAAA-------GAGGGGCCGAGGAATTACATCGGGAGGCAATTCTGGGGC------TCAGGGGCCGGGTCTGTCCTTAAGGGTTTCCTGAGGGCTTCATCCTCATAAAATATTCTCATTCACTCCGCGGGCTGGCAGCTGGACAGAGAGCAGGCAGCCACCCCGCGCTGGGCTCCCGGCCGGACCACCCAGCACTGAACTTGGGGATGGGGGG--GAGGCCAAATCACCCTGTGGGCTGGACACTCGACACACTGGGAATCTCTGCCTGGCTCCAGCCACACCCTGGGGAG-GGCTGCTGGCCC---GGCTCTGTCCCAGGGGGGT-----------------------------CCTT-----------TGGCCTGCCGGCTGTCAGACCCAGGGCTGTTCTCAAACCGAGCTCCAGGCACAATGAGGTCTTTGTCTGGTGTCTTTTGGGCCCCTGCGCA-----------------TGTGGCTCTGGGCTCTGGTCCTGTCCCAGCCTTG-------------GCACAGACGCTGGGGTCCTGGGGTGGGATGCTGGG-----------------------------------ACCTTGCT--------------------------------------------------GG-----GT-GTCCACTTCAGTGCCAAGCC--------------------------------------AGG-ACTGGCCTTCGCAA----GAGCAGTACTCTCCCTGGGGACAGGGACATGGGGGTGACTGTGGCCACTT---------GAT---TCTCTGGTGATGCTTCTGGTTCAGAGAGGGCCTCAGGGACGTGGCACC---------------------------------------------------------------------------CACCCCCCAGCC----AC---CCCAGAT------TGTGT-     
17 Lemur_catta-NC_059130.1-175126_175227               69.2%  24.9%    ---------------------------CGGCCCCCAGCC---------------------------------------CTG------GGCAGCCCAGACCTGGTGGCCCTCGTCCACCGTG-----GGC---------AG---CCCAGCTGC---AGACGCCTGGTCTG--------GGAGCGCCGGGCCCCC------ACCCGTGCAGCCACCCTCTGCAGGTGCTCGGGGCCGAGGG--AGG--GAG-----GCGTGACCTGCAGGGGTTCG------AGAG----GCTCTAACTGTGTAGTGAGATCTCGCTGTTGCCCTGAATCGCCTGGTCG--------------GAGGGGAGATCTGTGTGGTGGGCAAAGAGGTGGCTCGGACACAGTTTCACTGACTCTGACAGGACATTGCAAACGTGGGCTGGGCCCCACGTGGGCCTAGTTGTCCGAGAGG---------ACACGTGGGCCACCGAGGCCTGGCCCAGCAGCAGGGACTCTGCCGCGGTGTTCCCGCAGCCGTG-CGG-------TTTCCACTGGTGGGAGGAGCCGCCGAGGGACCTCGT-T-GGGGGCGTTTCTGGGGCT----------------------GGTTCAGGCTTCCCAAGAGCCTCAGCATCACAGCACCCTGGTT--CCTGCGCAGGG--------------CC-AGCAGGCAGATGCCCCCCCTGG-ACTGTGGGCATGGTGAGC------------------------------------TGACCCTGG---------------------GCACAGCCA-CGCAGGGCCCAGCCACGGCCCCTGGGA-GGGCGACCCTCCTAGCTGCCTGTCCCAAAGGGGTCCTTGGAGCTTCAGCGTGTGCCCTGACCCAGCT-----------GTCCTGGG-----------TGCAGAGAGCGGC-TGGCTCTCGGCCCAGAC-CCACCAGGTC---CTCCAGCCTCTGCTGGGCC---------------------------CCAGCACCTGTGGCTTG-----AGC---CTTGGCTTGGG-CACCTGGCGGGGCACTTGGGTCCTGCTGGGGA------------------------------------------------------------------------------------------------------------------------TCCACCAAGCCACGGTGCCAGGGGAGCAG-GCAGCCAGGAGCACCCCTCAGGGCCCGGCCTGCCCCA----GGGCCCACCCCGCTGGGGA--CAGGGGTGCAGGG--GGTTGTGGC--CAC---------GTT---GCTCTGGAGAGTCTCCTGGCTCAGAGGGGACCTGGCAGCACCACCCCG-----------GCCAC-CCAGACCG-TGGCCACGTGGGGAGAG------------------TCTCTCCCGGGCTGGCAGGCCAGCGTG---------------------------     
18 Equus_przewalskii-NW_007674960.1-187988_188105      74.1%  31.4%    ----------------------------------------------------------------------------------------------------------------------------------------------CCTGCACAGCCGCCCAGGGGAGG-----GCCG--------ACCTCCAGCCA------------------------------------------------------GG------------CAGAGGAGCCCTGATAATTAGCG----TCAATTTGGTTGTGGAGAAATCTCAATATTATTTCCACCACCTGGAATT-GTCTA----ATCAAGAGAGAGATATGTGTA-GTGGGTAAAGAGTGGTTTGAACATAATTTCATTAAGTCTAAGATGACAGTGGAATGTAGGCCAGTCCCAGCGTGGCCCTTGGGCCTCATCGCCTAATAAGCACCCTGGGCCAATGCAGAGGCCTGGCTCAGCAGAGGGGTCCAGCG---GGCGTGTGTTCAGCGGCAGCTGTTTCCATTTGTGGAAGGA-A---AAGCAGGCGCTCGACTATCTTGGGAGGCGGCGCTGGGGCTGGGGCTGGGG-GTCAGATCCATCC-TTTGGGTCTCCCGAGAGCCCCGTCA--------------------TCATAAAGTGTTGCATTCGGGTGGTGAGCAGGCAGCTACCTGGCCCTGGACTCCTGGTTATGGCACCCAGCACAGGGC-------CTG-GTG--GAGGCCAGACCACCCTGTGGGCTGGACACTTGACAGATTGGGCATCTCTGCCCAGCTCCAGCCACACCCCCTGGGA-GGGCTACCAGCC--AGGCTTGG-TCCCGAGGGACCTTTTGACCTGCAACACATGCCCTGGCTCGGTC-----------TGTCCAGCCAGCTCTCAGAAGCAGGGCTACCCTCTGAGACAGCACCAGACACACCAGGGTCACTTCCTCTG-----GCACCTGC-TGGG--------------------CCCTCATGCCAAGCTAGTCCCCTCCCAGCCTTG-------------GCATGGGTGCTCGGGTCCTGGAGGGAGATGCTGTG-----------------------------------GCCCTGCT--------------------------------------------------GG-----GT-GCCCGTCTCAATGCCAAACCACAGTGCCCAGGGAAGGCAGCAGCCAGGAGTACTGTCAGGG-CCCGGCCTTCCTGG----GAGCCCTGCTCTCCCTGGGGATGGGGATGTAGGAGAGGCTGTGGCCACCT---------GGC---TCACTGGTGATGCTTCTGGTTCAGAGGGGGCCTTAGGGACCTGGCACC---------------------------------------------------------------------------CACCTCTAGCCA----CC---CCAGATT------GTGT--     
19 Artibeus_jamaicensis-NW_023552099.1-176004_176101   72.6%  25.7%    -----GACTCTGGAGAGAAGTGAACAGGGGGCTGTTGGCCTGGGGCTG------------------------------CTTAGACAGCTGGGTCCCGCTCAGCTGGGCCTCCCTGCTCATCGGCATGGCCGCCCTCTGCGGGCGCTTGGAGCCCAGGGT-GGCAG-----GCTG----ACCTCTGTCCGGCTG------------------------------------------------------GA------------CAGGGCGGCTCTGATGGATGGTG----TCACCTTGGCTGTGGAGGAGTCTCAGCATGTCTGCCCCCAGAAATGGCCCGACCAGGGGGGAGATCTGTGTGGCTGTGTG-GTGGGCGGAGAGGGTCTTGAATGTAACGTCATTCACTCTGAGATGACAGTGTGGCCCGGGCGAGGTGCCCCGTGGCTCTCGGGCCTCACGGCCAGGCGGGCGCTCTGGGCCGGCTC---------------------------------------CCGGCAGCTGCGGGC----CAGTCTGTGCGAG-G-G---AAGCGGCAGG-CCAAGCACGTGGGGGGCGTTTCTGGGGCTGGG-------GGTTGGCTCCGCCCCTTCAGGTCTCACGGAGC-----------------GTTTTTCTTCACTGCCAGGAACCACAGCAGTGGGGGG--TGGGCAAGC-------------------------------------------------CCAGTG--GGGGCCACACCACCCCGTGGGCCGGACTGAATGCCCA----------GTGCCTAGCCCCAGCCATGCCCCGGCAG---GGC----TGTC--AACCCCCCTGCCCCAGGGGCCCTTTGACCCACACTGGGGG----------------------------------GGCCCTTGGACGCAGGCTGCCCTCAAACCCGGCACTGCACACACAGGGCCTCGGGGGGGGCATCTGCCGGTCCCCTGTG-------------------CTCGTGGCTCTGGGTTGGCCCTGTCCCAGCCTAGGCCTGGGTCCCTGGCATGGGCTCTCAGGTCCTGGAGCAAGAATGCGGG-----------------------------------GCCCTGCC--------------------------------------------------CG-----GT-GCCCACTGTGCCGCAGCGCCC---------GGAGCAGCAGCAGCCAGGAGCACAGGACGGG-ACCTAGCTTTCCCG----GAGACCCACTCTCTTCGGAGACGGGGACACAGGGATGGCTGTGGCCACTT---------------GCCTCGGTGATGCTCCTGGTTCAGAGGGGGCCCCAGGGACCTGGCACC---------------------------------------------------------------------------CACCCCAGGGCC----AC---CCAGACT------GTGTG-     
20 Microcebus_murinus-NC_033661.1-173626_173727        69.7%  25.2%    ------------------------------------------------------------------------------------------------GACCCAGTGGCCCTTGTCCACAGTG-----GTC---------AG---GCCGGCTGT---GGACACCTGGTTTG--------GGAGCGCCTGGCCTCCCTGCCCACTTTTGCAGCCACCCTCCGTAGGTGCTCTGGGGCCAAGG-GGGGAAGAT-----GTGACCTGCAGCCGGGCTCA------AGGG----GCTCTAACAGTGCAGTGGGATCTCGGTGTTGCCCCGAATCACCTAATCA--------------GAGGGGAGCTCTGTGTAGTGAACAAAGAGGCGGCCTGGACATAGTGTCACTGAATCTAACAGAACTTTGCAGATGTGGGCTGGCCCCAACGTGGGCCTAAGTGCCCAAGAGT---------GCACGTGGGCCTCCAGGGCCTGGCCCAGCAGCAGGGGCGAGGCCCAGGGGTTCCTGCAGTTGTG-TGG-------TTTCCATGGTGGGAG-GAGCAGCCGTGTGACCACGC-AGGGGGCATTTCTGGGGTGG----------------------GGTTCAGGCTTCCCAAGAGCCTCAGCATCACAGCACCTTCATT--CCTGCGTGGGG--------------CC-AGCAGGCAGATGCCCTGCCCTGGACTGTGGGCGTGGTGAGCAGCG-----------------------GAGGCCAGGTGACCCTGC---------------------TCACAGCCTCTCGGGGCCCCGGCCACGGTCCCTGGGA-GGGTGACTGGCCCAGCTCCCTGTCCCAAAGGGGTCCTTGGAGCTGCAGTGTGTGCCCTGACCCAGCC-----------GTCCCAGG-----------TGCAGGGAGCGGC-TGGCTCTCAGCCCAGAC-CCACCAGGTC---TTCCGGCGTCTGCTGGGCC---------------------------CCAGCACGTGTGAGGGC-----TCAGGCCTTGGCGTGAGCGCCTGGTGTGGACACGTGGGTCCTGCTGGGCG------------------------------------------------------------------------------------------------------------------------TCCACCAGGCCATGGTGCCAGGGGGGTACTGCAGCCAGGAGTACCCGTCAGGGCCTGGCCTCCCCAA----G--AGCCTGCCCCTGGGGA--CAGGGGTTCAGGG--GGTTGTGGC--CAC---------GTT---GCTCTGGAGAGTCTCCTGGCTCAGAGGGGACCTGGCACAGCCACCCTG-----------GCCAC-CCCAGACCGTGGCCACAAGGGGAGTC------------------TCTCCTGTGGCCAACAGGGCGG-C------------------------------     
21 Pteropus_alecto-NW_006429611.1-195173_195259        75.4%  23.7%    ------------------------------------------------------------------------------GAGACGACCCCGATTCCTGAGCGCCTGGGCCGCCCTGCCCTCCGCTCGGCCACCCTCTGTGGATGCTCAGAGCCAGGCAGGGGCTGACCTCGGCTGGCAGACAGGCCGGGGGTCCGCGTCAGCTTGGCCGCGCGACATCTCAGTGTTGTTTCTGCCCCTGGAGCTGCCTGGCTGACCTCAGCTGGCAGACAGGCCGGGGGTCCGCG----TCAGC-TTGGCCGCGCAATATCTCAGTGTTGTTTCTGCCCCTGGA-GCT-GCCCG----ATCAGAGGAGGGATCTGTGTG-GTGGGTGAAGAG-----TGAACGTAGTGTCAGTAAGTCCAAGAGGACAGCGGGCTGTGGGCCCTGGGCCTCGCTGCCTGACGAGCCCCCAGGGC-----------------------------------------TGGCTCCCGGCCGGCCTGTGCTTCCGGCTGCTGCCAGTCCCTGGTGTGAA---------GGGCAGCAGCCC---GCCCACACGGGCGGTTTCTGGGGC---------------------------TCGGGCCTCCTAGGGGCCCCGTCGTCACAGAGCGTGCTCAGTCACTGCTGGGGGCGCAC--------------------------------------------------------------------------------GGAGCCCCACGGAACCCAGACCATGCTGTGGGAGGGATGCCCAGCTCTGCCCATCCCCAGCCACGTCCCCTGGGA-GGGCTGCCAGCA--CAGCTCTGTCCCGAAGTGGCCCTCTGGCCTGCAGGGTGTGCCCTGTCCAGTCT-----------GTCCTGGCCAG---TCTGATGCAGAGCTGCCCTCACACTCAGCGCCGGACACACCAGTGCACGTGGCTGCG-------------------------------------GTCCTCACAGCAAGCTGGCCCTGTCCTAGCCTAGGCGTGCGGCCCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-----------------------------------NNNNNNNNNNNNN-------NNNNNNNN-NNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNACCCTGCCCA----GCACCCAGCCCCAGCACCGGGCGAGGCAGCGGCCGGGGC----------------------------ACAGGGCAGGGCCCAGCTTTCCTGGG---------------------------------------------------------------------------------------------------------------------------------------     
22 Otolemur_garnettii-NW_003852462.1-173747_173833     70.7%  25.2%    -------------------------GGCTGGATCCAGGG---------------------------------------CTG------GCTCTC--AGAGGAGCTGGGAGATGTGGACAGGGGCATTGTC---------TGAAGCCATGGGCCCAAAACCCAGTGCCCTGGCCACAGTGGTCAGGCCTGGCCTCCTGCCCACCTGTTTGGCTGCCAATTATAGGTGCTTTGGAGAGAGGGAGGGG-AGAC-----GTGAGCT-TCAGCAGGTCCT------AGGG----GCTCTAATAATCCAGCAAAATCTCAATACTGTGCCTGTCACCTGTCACTGTGCCT-GTCTCTAATCAGGAGAGATCTATGCACTGAATGAGGGTGGCTTGAACACAGTGTCACTGAATCTAATGTAACATCGTACAGGTGGGCTCAGCAG-----------------------------------------------------------------GAGGTGCCCGGCCAGGGTGTGCTCACAGCCCCTGTGGTTCCCACTGGAGGGAAGAATTCTGAGTAGCAATGTGATCATGT-TGGGGGCGTTTCTGGGGCTA----------------------GGCTCAGGCTTCCTGGGAGCCTCAATTTCATAGCATCTTCATT--CCTGCTCAGGA--------------GACAGCAGGAGGGTGCCCCACCCTGGATTCCTGGTGTGGTTAGCAGGG-----------------------GAGGCCAGCTGACCCTGG---------------------GCACAGCCACTA--CGCCCCAGCCATGGCCCCTGGAA-GGGCAACCAGTCCAGCCCCTTGTCCCAAAGGGGCCCTTGGAGATGCCTGGTTGTCCTAGGTGCAGTG-----------AATGGTTGGCC---TCAGGTCAGGATTGCCCT-TGAATCCAGCATCAGATGCACCAAGGTC---TTCTGGGGTCTGCTGGGCC---------------------------CCTCATGCCAAGCTGGCCCTGTTCTAGCCTTGGCATGAGCACATGA--TAGGCATTTGGGTCCTGCTGCAGTCCA-----------------------------------------------------------------------------------------------------------------CCTCCATGCTAAGCCACAGCGTCAGGGCAGTGTAGCAGCTGGCAGCACAAGTCAGGTCCCCACCTGCCCCG----AAGCCCGC--CACTGGGCA--TGGGGACACAGTGG-GATTGTGAC-TGTG---------TCA---CTCATGGAGATTGTCCTGGCTCAGAGGGGACTTGGCACCAAATGGTGG-----------CCCCT-ATGAGGAAG---------------GC------------------TGTCCCTTG---------------------------------------------     
23 Callorhinus_ursinus-NW_020313076.1-188247_188358    72.5%  25.7%    ----------AGCAGCAGGGGTGGGGGGTCGATGCTGGCCTAGAGCTGTGGACCCCA--------GACCCAAGCAGCCGTGTCCACGGTAGACCCTGAGTGCCTGGGCCTCCCCGGCCATCCCCATGTCCCACCCTCCCAGCGCTCTGAAGCCCAGGGAAGGAAG-----GCTG--------ACTCCCCGCCA------------------------------------------------------GG------------CAGAGCAGCTCTGATCATCAGGG----TCAATTTTGTTGCCGAGAAATCTCAAGATTGTTTCCAGCACCTGGAAGT-GCCTG----ATCGAAGGCGAGATCTGT----GGGGGTAAAGAGTGCCTTGAACATAGTTTCATGAAGTCTGAGATAACAGCGGAGAGCAGGCTAGGCCCAGCATGGCCCTCGGACACCCAGCAGAGTGGC-----------------------------------------TCCAACCTGAGGGTGCCTTCACGGGCCGCAGTCACTGTCTGCACAAA-------GAGCGGCCAACGGATTGCTTCAGGAGGCACTTCTGGGGCTGTGC-------------------------------TTTTGGGGCTCATCCTCATAAAATGTTTTCATCCGCCCCGAGGGCTGGCAGCTGAATGGAGACCAGGCAGCCACCCCAGCCTGGACTCCTGGCTGTACCGCCCCGCACAGAAC-------TGGGTGG--GAGGCCAAATCACCCCGTGGGCTGGACACTCAATGCAATGGGCATCTCCGCCCAGCTCCAGCCACGCCCTGGGGAG-GGCTGCCCGCC---------------------------------------------------TGCCC-----------TGTCCTGCCAGCTCTCAGACCCAGGGCTGCCCTCAAACCGAGCTCCAGACACAAGTGGTCTTTGTCT---G-----GTGTCTTCTGGGCCC-----------------CAGCACATGTGGCTCTGGTCCTGTCCCCGCCTTG-------------GCACAGATGCTGGGGTCCTGGAGTGAGGCTCGGGG-----------------------------------GCCTTGCT--------------------------------------------------GG-----GT-ACCCATCGCAGTGCCAAGCTAGGAGC-------------------------AGATGGTAGA-GGTCAGCCTTCCCA----GAGCAGTTCTCTCACTGGGCACAGGGACATGGGGGTGTCTGTGGTCACCT---------GGT---TCCCTGGTGATGCTCCTGGTTCAGAGGAGGCCTCAGGGACCTGGCACC---------------------------------------------------------------------------TAGCCCCTAGTC----AC---CCCAGAT------TGTG--     
24 Marmota_flaviventris-NW_023144724.1-172912_173118   90.7%  40.8%    -------------------------------CCA-TGGA-----GGTCAGCCA------------GCCGGAGATGGCCC---------CAGTGCCTGAGCACCTGCTCTCCCGGCCCACCCGTGCCGCAGACCTCTGCTGGTGCTGGAGCCGC-----AGGAA-------------------------------------------------------------------------GGG---AGCGTGCTTCCAGCCAGGCTCAGGCCACTCTGATAATTAGCATCA-ATTTGTTTGTAAGAAAAAAATCTTGATATTATTTCCAGCTGCCTGGAACTGCC-------CAGTCAGAG------------TGGAGATTGATTCGACTCCAACATCATCTCATTAAACCCAAGAACGC--TGGAATGTGGGGTGACCGGCGCCC---ACCCTGTGCCCGGCCG-CCCAGAGCACCCTTGGGCTGCAG-A-GACCTGGCTCGGCAG--------------AGGG----CTGGGGGAGTGCATCAGCCCTGTGGCTGGCAGC-A---GCACTGCCC-------AGGG-TGGCCATGTTGCTGGGGGTGGGG-TCAGGCCCCC----------TTTTTATTGGGGTGGGGAGGGACCTTAAGAGCATT--TCACTCACTGGTGAAGGACAGAGCTCTGTGCTC---A--CTGGTGACTGGCAGATGTCCTGCCTGGACTT--GAGGCCATGCTGCTCAGCCCAGTGGGCAGTGAGTGATGCTCGCCCTGGGATACGG-----------------------------------CTGCTCGACAGTG----GGTGACCAGCCCAGCTCCTCTCTCAGAAAGGGGCCT-CTGGCCTGTAGTGGGC--ATGGTCTGGTTGTCCTGGGTGAAGC---CGTTAGCTCTCGGACTCAGGGCCGCCCTCCTATCTAGCGTCAGACACGCGAGG--T-CCCGTCTGTGCCTGCCGGGCCTTGGGGCCTGTGGCCTTGG-GCTG------------------------TCCTGGCCTTGGCCTGG-GACGCAGCACAGACACTGGGGTCCCGCTGCACACCCATGTCTGGGCCAGGCCTCAGCCAAGGAGTGGGCAGCAGGGAGCACGAGCCAGGGCCAGCTCGCCCCA--GAGCCCTCTCACGGAGGAGGGGACTGCTGGGC--------------TGCCG-GGCGAGTGTCCTGCATGGAGG-----GCTCCTCGGGGGACCTGTCATCATCTCCTGGCCACACTAGGCTGTATGGCCACACGGGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
25 Canis_lupus-NW_023365093.1-186980_187145            75.2%  28.9%    ----------------------------------------------------------------------------------------------------------------CCGGCCCTCTCCACAGCCACCCTCCGCAGGGCTCTGGAACCCAGGGAAGGAGG-----GCTG--------ACCTCCAGCCA------------------------------------------------------GG------------CAGGGCAGCTTTGCTCGTTAGCA----TCAATTTGGTCGTCGAGAAATCTCAATACTGTTTCCATCGGAAGTGCCT-GATCA----A-----AGGAGAGTCTGTGTG-GTGGGTAAAGGCTGCCTTGAACAGAGTTTCATCAAGTCTGAGATAAGAGCAGAGTGCAGTCTAGGCCCCGCGTGGCCTCCAACACCCTGTGCTGGCTCCGAGGCCTGGCCCAGCTCGGTGGCTC------------------CTGCCTGAGCGCGCCCTCACCTCCCGCGGTTGCTGTCTGCAGGAA-------GAGTGGCTGAGGGATTCCTTCAGGAAGCACTTCTGGGGC------TGAGGGGCTAGGTCTGTCTTTTTGGGTCTCCTGAAGGTCTCATCCCCATAAAGTGTTCTTACTCACCCTGAGGGCTGGCAGCTGGACAGAAAGCCAGCAGCCACCCCATCCTGGACTCCTGGCTGTGCCACCCAGCACTGAAC-------TGGGTGG--GAGGCCAAATCACCCTGTAAGCCGGACACTCAACACAATGGGCATCTCTGCCCAGCTCCAGCCACACCCTGGGAG---CACTGACAGCC--TGGCTCTGTCCCCAGGGTGCCCTTTGACCTGCAGCATGTGCCCTGGCCTGGCC-----------TGGCCTGCTGGCTCTCAGACCCAGGGCTGCCCTCAAACCGAGCTCCAGACACATGTGGTCTTTGGTGTCTT-----CTGGGTCCCAGCACA-----------------CGGGGCTCTGGGCTCTGATCCTGCTCCAGCCTTG-------------GCGAGGATGCTGGGGTCCTAGAGTGAGGCTCTCGG-----------------------------------GCCCTGCT--------------------------------------------------AG-----GT-GCTCACCTCAGTGTCAAGCTA------------------------AGGGCAGATGTTAGAG-ATCAGCCTTCCCAA----GAGCAGTGCTCTCACTGGACACAGGGAAGTGCAGGTGGCTGTGGTACCCT---------GGT---TCCCTGCTGATGATGATGGTCCAGAAAGGGCCTCAGGGACCTAGTGCC---------------------------------------------------------------------------CACCCCCATCAC----CC---CAGATTG------T-----     
   clustal                                                                                                                                                                                                                                                                                                                                                      .                         .                                                                                                               .                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               .