Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%

                                                              cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .  ] 1593
 1 Target                                                  100.0% 100.0%    ------------------------------CCCAACCACCCTGATGTTAGGAGTTATGAAAATGCAGCCTTCAGCTGAGCTGCGGCCTTTATTGTCTGTAATTGGTTTCTGTTTCCGGAAA--GCCTGCTGGGCCGGGGGAGAGAAACTCTGCCCGTCAGCAGGTCCTGGTTCCGGGT-GGTGCTGGCTGAGCCAGCAAACCAGGCCCTGGGGCCTTGCTGCT-TTGCTGCAGCTTGGAAAGCGGGTTCTGTGGGTGCAAGTGCCAGGCC-CTGGGGTCTCTGACA--CGCACATACACGCACACACACGCACACGCATGCACGTGCATAAATACACGCACACACGTGCACATACACATAT--GCACACAGGCACACACATGCACACACACACGCATACACATGCTCACAG--CCT----------G--------ACAGCTCCGCCGTGTCCAGCCCCTGCCAG-C-----------TCC-----TGCCAGCTCCTGCCAGCTGCTGCCTGTTCTCACTGTAGGTGGCTGGTCATGCCT---GGCTGGAGCAAGGGAAGCTGGCC-TGC--TC-----A-----CAGGACAGGGT-------GTGTGC---GTGAGTTAGGGGCTG--------------------------------------------------GGTGCTTGCAGACACTCTGGG--GACTGCCC-GG-------------GGCTTGTGAAGGCCC-CAGTGGGGACACAGTCTGCCTGGGCTGT-------------GGGGGCTGGCAGGTGG--------CTGAGTCTGCATGTCT----G-CGCCCCTTCTCCCTGCCTGCCTGGGGCCA-------TCCCCA-----------GCCACATTTTGGGCTCAGGGGCAGCTCTGGGGCCAGCAGGTCCCTCCACAGAGTTGAGGCTGTG-------------------CCAGGGCCCGGGCAGCAGGGTGGCTTAGGGT-GC---AGGCTCCAGAGTGGCCTCTGAGTGGGAGGAGACAGATGCCCCTCACTGAATCCAGCACGAGTGTGCGTGGTTTCTGGGGCCTGAAGGTCCAACCAG---------------------------------------------------ACCTCCCT---------AAGGGAACCCCAG----GCAGGCGGAAGCAGGGACAGTCT---------GCAGGGCTG-GCTCTGGA-GAGGAA--TGGCGAGGT----------------------------A-GCTGTTG----CTGTCAGGTTACCGGCCTG--------GCACTCCAGCCCT---ATGTA---GTGGAGGCCCAG-------------------------TGGCC----------CTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 2 Piliocolobus_tephrosceles-NC_045434.1-205339_206146      96.8%  78.5%    -------------------TGCGGCCCTTGCCCAGCCACCCTGATGTTAGGAGTTATGAAAATGCAGCTTTCAGCTGAGCTGCGGCCTTTATTGTCTGTAATTAGTTTCTGTTTCCGGAAA--GCCTGCTGGGCCGGGGGAGAGAA--ACTGCCCGTCAGCAGGTTCTGGTTCCGGGC-GGTGCTGGCTGAGCCAGCAAACCAGGCCCTAGGGCCTTGCTGCT-TTGCTGCAGCTTGGAAAGTGGGTTCTGTGGGTGCAAGCGCCAGGCC-CCAGGGTCTCTGACA--CGCACATAGGTGCACACACAT------ACATGCATGTGCATACATATGTGCACACACGGGCACATACACATAT--GCACACAGGCACGCACATGCACACGTGCACACACACACACGCTCACAG--TCT----------G--------ACAGCTCCGCCGTGTCCAGC------------------------C-----TGTCAGCTCCTGCCTGCTCCTGCCTGTTCTCGCTGTAGATGGCTGGTCATGCCT---GGCTGGAGCAAGGGAGGCTGGAC-TGT--TC-----A-----CAGCACCGAGT-------TTGTGC---GTGAGTCGGGGGCTG--------------------------------------------------GGTGCTCGCAGACACTCTGGG--GACTGTCT-GG-------------GGCTCGTGAAGGCCC-CGGTGGGGAGACAGTCTGCCTGGGCCGT-------------GGTGGCCGGCAGGTGA--------CTGAGTCTGCACATCT----G-CATCC-CTCTCCCTGCCTGCCTAGGGCCA-------TCCCCA-----------GCCACATTCTGGGCTCAGGGGCAGCTCTGGGGCCAGCAGGCCCCTCCACAGGGTTGCGACTGTG-------------------CCAGGGCCCGGGGAGCAGGCTGGTTTAGGGT-GC---GGGCTCCAGAGTGGCCTCTGAGTGGGAGGAGACAGATGCCCCTCACTGAATCCAGCAAGAGTGTGCACGGCATGGCCGGGCGCGGTGGCTCAAGCC---------------------------------------------------TGTAATCCCAGCACT--TTGGGAGGCCGAG----ACGGGCGGAT-----------CA---------TGAGGTCAG-GAGATCGA-GACCATCCTGGCTAACA----------------------------C-GGTGAAACCCTGTCTCTACTAAAAAATACA--------AAAAACTAGCCGG---GTGAGGTGGTGGGCGCCTAT-------------------------AGTCC----------CAGC----TACT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 3 Cebus_imitator-NW_016107460.1-181530_182386              94.2%  65.5%    ----------------CCACATAGCCCTCGCCCAACCACGCTGATGATAGGAGTTATGAAAATGCGGCGTTCAGCTGAGCTGCCGCCTTTATTGTCTGTAATTAGTTTCTGTTTCCGGAAA--GCCTGCTGGGCTGGGGGAGAAGAACTCTGCCCGTCAGCAGGTCCTGGTTACGGGT-GGCGCTGGCTGAGCCAGCAAACCAGGCCCAGGAGCCTTGCTGCT-TTGCTGCGTCTTGGAAAGAGGGTTCTGTGGGCGCGACCACCAGGCC-CCAGGGTCCCTGACA--TGCTCACATGCACGCACACACACGTGCACACACACATGTGCGCACA--------CGCGTGTACA------------------------GGCACACACGTGCACACACACATACATGCTCACAG--CCT----------G--------ACAGCCCCTCCGCGTCCAGCCC----------------------T-----TGCCAGCTGCTGCCTGCTCTGGCCTGTTCTCACCGTATATGGCTGGTCATGCCT---GGTTGGAGCAAGGGAGGCCGGAT-GC---TC-----A-----CGGCGTGGGGT-------GTGTGC---CTGAGTTAGGGGCCA-------GATGCTCGCAG-------------------------------------------ACACTCT-CTGGGACTGCTG-GGG----GCTCATAGGCCCCTCCTGAAGGC-CCCAGTGGGGACAGTCTGCCTGGGCCTT-------------GGGGGCTGGCAGGGAC--------CTGAGTCTGCAACTCA----G-CACCCCCTTTCCCTGCCTGCCTGGGCTGGGCC----ATCCCC-----------AACAAAATTCGGGCTCAGGGGCAGCTCTGGGGCCAGCAGCCCCTTCCACAGGGTTGAGGCTGTG-------------------CCAGGGCCCGGGCCACAGCCTGGCTTAGGGTTGT---GGGTTCCAGAGTGGTCTCTGAGCAGGAGGAGTCAGAGGCCCCTCACGGAATGCAACATGAGCGGGTGCGGCTTCTGGGGCCTAAAGGTCCAGCCTG---------------------------------------------------ACCTCCCCGAGGGAG--CCCCAGGCAGTGG----AGGGTGGTCCTGAGTGTGGGCTG---------GCAGGTGGAGGTGGGGGA-GGGGGTGCTGGCAGGTG----------------------------GAGGTGGGGGAGGGGGTGCTGGCAGGCGGANN--------NNNNNNNNNNNNN---NNNNNNNNNNNNNNNNNNNN-------------------------NNN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 4 Callithrix_jacchus-NC_048389.1-186968_187792             91.5%  61.9%    GCGCTTGTTACTTTCCCCACGTGGCCCTCGCCCAACCACCCTGATGATAGGAGTTATGGAAATGCAGCATTCAGCTGAGCTGCCGTCTTTATTGTCTGTAATTAGTTTCTGTTTCCGGAAA--GCCTGCTGGGCTGGGGGAGAGGAACTCTGCCCGTCAGCAGGTCCTGGTTACGGTG-ACG-CTGACTGAGCCAGTAAAC-CAGGCTCGGGGCGTTGCTGCT-TTGCTGTGTCTTGGAAAGAGGGTTCTGTGGGTAAGAGTGCCAGGCC-CTGGGGTCCCTGACA--TGCACACATGCACGCACACACATGTGCACACACACATGCA--------------------CACA------------------------CATGTATACAGGCACACACACACACACGCTCACAG--CCT----------G--------ACAGCCCCTCCACATCCAGCCC----------------------C-----TGCCAGCTCCTGCCTACTCTGGCCTGTTCTCACTGTATATGGCTGGTCATGCCT---GGCTGGAGCAAGGGAGGCTGGAT-GC---TC-----A-----CAGCATGGGGT-------GTGTGC---CTGA-------------------------------------------------GTTAGG-GGCCGGATGCTTGCAGACACTCACTGGGGACTGCTG-CGG----GCTCAGAGGCCCCTCCTGAAGGC-CCCAGTGGGGACAGTCTGCCTGGGCCTT-------------GGGGGCTGGCAGGGAC--------CTGAGTCTGCACCTCA----G-CACCCCCTTTCCCTGCCTGCCTGGGCTGGGCC----ATCCCC-----------AACCAAATTCAGGCTCAGGGGCAGCTCTGGGGCCAGCAGGCCCTTCCACAGGGTTGAGGCTA-------------------------------------TGCCAGGCTTAGCGT-GC---GGGCTCCAGAATGGTCTCTGAGCAGGAGGAGACAGAGGCCCCTCACTGAATCCAACATGAGTGGGCACGGCTTCTGGGGCCTAAAGGTCTAGCCTG---------------------------------------------------ACCTCCCCAAGGGAG--CCCCAGGCAGTGG----AGGGCGATCCTCAGTGTGGGCTG---------GCAGGCAGAGGTGGGGGA-GGGGGTGCTGGCAGGCA----------------------------GAGGGGGAAGCCTGCAGGTCTGGCTCTGGAGA--------GGAATGGTGGG-G---CAGCTGTGGCTCTCCGGTCA-------------------------CAGGC----------CTGG----CACTCCAGCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 5 Saimiri_boliviensis-NW_024100927.1-185794_186670         92.5%  65.6%    --------------------------CTCGCCCAACCACCCTGACGATAGGAGTTATGAAAATGCAGCGTTCAGCTGAGCTGCCGCCTTTATTGTCTGTAATTAGTTTCTGTTTCCGGAAA--GCCTGCTGGGCTGGGGGAGAGGAACTCTGCCCGTCAGCAGGTCCTGGTTACGGGT-GGCGCTGACTGAGCTGGCAAACCAGGCCCGGGGGCCTTGCTGCT-TTGCTGTGTCTTGGAAAGAGGGTTCTGTGGGCGCGAGCGCCAGGCC-CTGGGGTCTCTGACA--TGCACACATGCGCGCATACACACGTGCACACACACACGTG--------------------TACA------------------------GGCACACACG--CTCGCATACACACATGCTCACAG--CCT----------G-----------ACACCTCCGTGTCCAGCCC----------------------C-----TGCCAGCTCCTGCCTGCTCCAGCCTATTCTCACCGTATATGGCTGCTCATGCCT---GGCTGGAGCAAGGGAGGCTGGAC-GC---TC-----G-----CGGCGTGGGGT-------GTGTGC---CTGAGTTAGGGGTCA-------GATGCTCGCAGTGTG---GGTGTGTACCTGAGTTAGG-GGTCGGATGCTCACAGACACTCTCTGGGGACTGCTG-GGG----GCTCATAGGCCCCTCCTGAAGGC-CCCAGTGGGGACAGTCTGCCTGGGTCTT-------------GGGGGCTGGCAGGGAT--------CTGAGTCTGCACCTCA----G-CACCCCCTTTCCCTGCCTGCCTGGGCCGGGCC----ATCCCC-----------AACCAAATTTGGGCTCAGGCA--GCTCTGGGTCCAGCAGGCCCTTCCACAGGGTTGAGGCTGTG-------------------CCAGGGCCCGGGCCGCAGGCTGGCTTAGGGT-GC---GGGCTCCAGAATGGTCTCTGAGCAGGATGAGACAGAGGCCCCTCACTGAATCCAACGTGAGTGGGTGCAGCTTCTGGGGCCTAAAGGTCCGGCCTG---------------------------------------------------ACCTCCCCGAGGGAG--CCCCAGGCAGTGG----AGGGGGATCCTGAGTGTGGGCTG---------GCAGGTGGAGGTGGGGGA-GGGGTGCTGGCA-GGTG----------------------------GAGGTGGGGGGGTGCTGGCAGGTGGAGGTGGG--------GGAGGGGTGCTGG---CAGGTGGAGGTTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 6 Aotus_nancymaae-NW_018508829.1-107846_108119             91.1%  47.9%    ----------------------------CGCCCAACCACCCTGATGATAGGAGTTATGAAAATGCAGCGTTCAGCTGAGCTGCCGCCTTTATTGTCTGTAATTAGTTTCTGTTTCCGGAAA--GCCTGCTGGGCTGGGGGAGAGGAACTCTGCCCGTCAGCAGGTCCTGGTTATGGGT-GGCGCTGGCTGAGCCAGCAAATCAGGCCCAGGGGCCTTGCTGCT-TTGCTGAGTCTTGGAAAGAGGGTTCTGTGGGTGAAAGCACCAGGCC-CTGGGGTCCCTGACA--TGCACACATGCACACACACACACGGGCACACACACAGGAGTGCCTGGCGCTCCAGCCCCGTGCAGTGGCCCTGGTGTTTGGTGGTCAAGCCAAACATGGCTGGCATTGCCCAGCACGGCCTAA--TCA----------G--------AGAGCCCTGCATGGTGGA----------------------------------TAAAGGCTTGGCTTCAGCTTCATTTCCTCCAACCGAAGCTAAGGCTGGAAGT---GGCTGGACCCAGAGCGGGGCGTAATTG--CC-----A-----AAGGGCACGCT-------GGGTGGGCACTGAGGCAGGCTCGG-------CCAGGGTGCGGTTCAACAGCCGTGGCTTCCCTTTGTG-GGAAGAAAAGTTGCTGCGTGACTGTCCGGGGTGTTC-TGGGGTTGGGCTCAGGCCCCCCGAGGGCCT-CACCGTCCGGGCAGTTTTGCTCC----T-------------GCTCAGTGGAGAGTGG--------CTCACGCTGGTGCACA----G-C-----CTCTCCATG----------GAGGGGC----CTCATC-----------TGCCCAGCTCAGCCACAGGCCCAGACTGTGTCCCACGGGGCCCCTTTGAGCTGTAGCATGTACCCT--------CATGGCTGTCCTGGGTGCAGTGAGTGGGCAGCCTCAGACTTGG---GGC-TGCCCTCACACCTCATGCC-------------AGGCACCCTGGGACTTCGTCTGGTGTGTGCTGGGCC-CTGGCGTATGTGGCTCTAGCTGG---------------------------------------------------GT--C------------CTTCATGCCATGC----TGGCCTC--------------AT---------CCAAGCCTTGGCCTGGGC-ACACAACCTGGCCCTAG------------------------------GGTCCTGACCTACCTCTATGGGTCTAGGGC--------A-------GGCGG---TAGCCGGGGCTCTGTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 7 Galeopterus_variegatus-NW_007727608.1-240505_240782      79.2%  34.0%    -----------------------------GCCCCAACCCCCTGGTGCTAGAAGTTATGAAAATGCATCCTTCAGCTGAGCCATGGCCTTTATTGTCTGTAATTAGTTTCTCTTTTTCCGGAACCCCTGCGGGCCGAGGAGAGGACTC---TGCCCGTCAGCAGGTCCTGGTTTGGGGAGGGCAGAGCCTGAGCCAGCAAACCCAGCCCTGGGGCCTCATTGCT-TTGCTGCAGCCAGAAAG-AAGGTTCTGGGGGCGTGCGCACCAGGCCCCTGCACCCCCCGACACACGTGCATGCACACGCAC----GCATGCG------CACATG----CTCATGGCCTGGCAGCCCGC----TGTGCCCGCATGA-TGGATGGGCAGTTGTG--CCCCCTGGAGCA--CGTGGATCTGCACAAGTGAGGGTGGTGAGCAGGTGCTTGCTGAGGACTGGGGGCCATGGAGTCCCGCCAGAAGGCCCCGGTGGGGACGAAGCTCGTTGGCTCACACCTGCTCACC------------------------------------------------------------AG----CACCCGCTTTT------------GCTGCCTGCCTGGGGCTGAGC--CATGTCCACCACCACCCCAGCCTCTGG--------------------------------GGCAGCTCTGCGGTCGGTGGGCCCTTCCACAGCGGTGGGGCTGTGCCAGG-ACCTGGGCAACAGGGTGAGGTAGGATGT--GGGGTCCCAAGCAGCCCTTGGAGGTGGGG---GCACAAATGCGCCTCACTGGATCGGGCACGA-GGTACAGGCTCCTGGGGCATGAAGGTCCCAACTCC------AAGTCCTGGCTGGAAATG--CTCCGTGGTAG-GAGCTCCAGGAAACCCTTTTGTGAAGATGCACCTTTTGTGAG-----GACGCTGGGCCTGTGGGCACACAGCAGGCACCCGTGGTC---------CCTCTGGCCATGTC-C-----------AGCCAGATTG---------CCT-----------AGGGGAAGCC-CTGGGCAGCGAG-AGAGACCCTGAGCCT-----------------GGGGCTGGCAGGTGTTGCTAAGTCCCAG-GCCTGGCTCTGGAGAGGGTGGGGGACTG------------TTG--CCCTGAATCCATGGC-----------CTCAGACCCCAG--ACCCTGTGTGGCACAGACCT---------------GGTGGCCTTTCTTCACAGTGGTCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 8 Bubalus_bubalis-NC_059161.1-174692_175427                76.2%  30.4%    ---------------------------CGGTCTGCTGCCACTGCTGTTAGCAGTTATGAAAATG-CATCCTCAGCTGAGCGGCTGCCTTTATTGTCTGTAATGAGTTTCTCTCTTTCCGGAACCCCTGCTGGGATAGGGGAGGAAGGCAGGTGGTGTCAGTGGGTCCTGGTTCTGGGTGGGGCTGGGCCAGCAAAGCCTGCCCTCACT-CAGGACTCGCTGTC-TCACTGCTGCTGGGGAA-AGGGTTCTGTGAGGTTGAATGAGGTGCC-ATGCCCCAACACACATGCACACACACACACACACACACAGACAAACACACAGAGACA----CACGTGCACACATGCGTACA----CATGCATGCACACATGCACACACATGTGCA--CACGCAAACACACATGCA------CACA------CACAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGCTGCCCCTCCAGGTGCAAGCCCTGGCGGCTCCC-TCCTGGGCTCCTGTGATGGACAGGAAGT--CA--------TGCTTGGCTGGAGCAAGGG---GA-GCTG---GCCAGCTCAGAGTGTGTGGGTCTGTGTAAATAGCAGGGGTGGGAGGGGGGCATGGTGAACTGGATGATCTCAGATT-CTGG--TTGAGGACTGGGGGGTCTCACATGGCCCATCCTGAAGGCCCAGCGGGGACACAG-----CCTGCCTGGGCAGTGAGGAACTGGCAGGTGGCTCAGGCT---------TG-CAGAGCCATAC-CCCCACCCCATTCTCTGCCTGC---------TCTG-----CCTCTGGGAGCAGCT-CGGGGGTCAGCAGTCCCTGCCCGAACATG----AGGCTGTGCCAGGGGCCAGG------------------CA-ACAGGGCTCACATTGGCCTTGGAGACAGGACAAAAGATGAGTGC-ACCTCATGGA-----------GTGGGCACAGGCTTCTGGCACCTTAAGGTCA-------------------------AGTCCTGGCTTGAAAACGC-CCCCACTGGGAGCTCCAGAG--AGCCCACATCCCCAGCCCCTCTGGGA---------------------------------GCAAGAGGGGCCCATGCAGAGCACCCTGAGCAGCCCCAGGCCAGTT------GGTATCTGGGCACTGTCTAGACCACTTTGAGAAGGAC-TGGAGAGGTGGACTGGC------------------------------------------------------------------AAGAGAGA-------------------------------------------     
 9 Globicephala_melas-NW_022134856.1-175232_175584          78.3%  30.0%    --------------------GCCTGTGGTCCCCAGCCACCCCGGTGTTAGCAGTTATGAAAATG-CATCCTCAGCTGAGCGGCGGCCTTTATTGTCTGTAATTAGTTTCTCTCTTTGCGGAACCGCTGCTGGGCCGGGGGAGGAAGG----CGGTGTCAGCAGGTCCTGGATCCGGGTGGGGACGGGCGAGCAAACTCCA-CCTCACT-CAGGCCTCACTGTC-TTGCTGCCACCTGGGAAGAGGGTTCCACGAGCTTGAACCAGGCCCT-GTGCCCCAACACACACACACACACACACACACAGACACACACACACACAGACACACA----CACACACAGACATACACACA----CACACA----------------------------------------------------------GACACAC------------------------------ACACACAGA-CACACACACACACAGACA--------CACACAGACATAC--------ACACACA--------------------------------------------CACAGACACACAGACACACAC--------------ACACACAC------------------A--GACACACAGACACACAG--------------ACACACA---------CACACACACACACACACACACACAGCC-AACCGCTCCAGAGGCTCGGCGCCCGGCTGCCCCC-TTCTGGGCTCTCGCAAGGGACGGGAGGT--GG--------TGCTTGGCTGGAGCGAGGG---GA-GCTG---GCCGGCCCGGAGCGCGTGGGTCTGTGCGTGAATGGCGGGGGCG----GGGTGGTGTGAGCAGAGTGCTCTCGGACTGCTGG--GTGAGTACTGGGGGGCTCACAGGGCCCCTCCTGAAGGCCCCAGCGGGGACAGAG-----CCGGCCTGGGCAGTGAGGGGCCGGCAGACAGCTCAGGCC---------CG-CAGAGCAGC------CCCACCGTTCCCTGCCTGC---------CCTG-----CTTCCAGGGGCAGCT-CGGGGGTCAGCAGTGCCTTCCAGAACGGT----GAGGGTGTCA---------------------------------GGGGCTCAGATCGGCCTCAGAGGCAGGACGAGAGACGAGTGC-CCCCCACGGAATGGGTGCGA-GTGGGCACAGGCTTCTGGGGCCTGAAGGTCCG---CCAC---------------CAAGACCTTCCTTGAAAATGCCCCCCCGCTGGAGCTCCGGAG--AGCCCACGCCCCCCGCCCCTCCTGTAAGGAGCTCCCCACAAAGGGGCACAAAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
10 Dipodomys_ordii-NW_012267222.1-170926_171296             82.1%  33.7%    ---------------------------------AACCACCCTGGTGTTAGAAGTTATGAAAATGCATCCTTCAGCTGAGCAGCAGCCTTTATTGTCTGTAATTAGTTCTCTTTCTGGAACCTCTGCGGGGGAGAGA----------AACTCTGCCGTCAGCAGGTCCTGGTTTGGGGCAGGGATGGGCTGAGCCAGCAAACCAAGTCCCACAGCCTTG-CGCC-TTGCTACAGCCTGGGAAAGAGGCTATATAAGCTTGGGCTCCAGATTCCCCAACACATATGCACAGGAGCACATATGTCTGCATACACGTGGACATGTGTGCGCACG--CGCGCGCACACACACGCGCA----CACGTGCACACACGTGCACACACACGCACA--CACGCAC--ACGCATGCGTACACACACG--------CAC--------ACACGCGCGCGCGCACACACACGCACACACA-------CG--CACACACACACATGTGTACATACACACACACACGCACGCACACGCGCACACA--------CA-------CATGC-----------ACACACATGCACACGCGCACACACATGCACACG--------CATGCGTACGCACACACGCACACG--CACGCACACACACACAC--GCACACGCGCACACACACAT---GCACACACACACACACACACA-GCTCTTGGCCTGACAGCTCTGCCGTGTCCAGCCCCTGACAGATCC--------------TGCTAGACAAGCAGT--C--------ATGCCCGGCTGGAGCCACAG---------C--TGCCTGCTCCGAGTCCGTGCGCATGGGCACCAGGGGGGGCAGTGAGCTCTCAGACTGC------CC--CTCCCCACTGCAGACCCTGGTGGAGAC-AGTCTGC-CCGGGCAGCGGGGA------CGGGCAGGTGT--------CTTGCATCTGATGAGATGACCTCCCTTCCCCCATGGGACCCAG-----GGCTGGGCCACTGC-ACTTCCTTGTG----------------------AG-----CCTGTGGGGGCAGCCCCTGGCCTCAGCAGGACCTTCCTCGGGCTG----CAGCGGGAGCCGGACCGCAG--------GTGACACGGGAC-ATCAGGCCCCGTGTGTCGGCCTGAGCAAGG----GGCCCAGTCTGAGGTCTTGACTTGGG------CTCTGAGATGGACTCTTGGAGTCCACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
11 Peromyscus_leucopus-NC_051064.1-174210_174556            67.2%  25.2%    ----AGTAGCCACCCCACTCTGCCTTGACCCCCAACCACCCTGGTGTTAGGAGTTATGAAAATGCATCCTTCAGCCAAGC-ACAGCCTTTATTGTCTGTAATTAGTTCTGTCTTTTGGGAACCTCCATGGGAGAGA----------AACTCTTGCGTTAGCAGGTCCTGGTTTGGGGCAGGAATGGGCTGAGCCAGCAGACCCAGATCTTTGGCCTTGTTTTCCTTGCTGCAGCCTGGAAAGGGGTTTCTGTGGGCATGGATGCCGGGCC-TGTCCCTAACACACACACACACACGCACGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCACGCACACACACACACACACACACACAC-ACACACACACACACACACACACGCTCTTGGCCTGACAGCTCTGCCGTGTCTGGCCCTCAAAGCTTCCTGTGTGTGCACTCAGGCTAGACAGGCAGT--C--------ATGCTCAGCTGCAGCAATGA------CAGC---TGC---------AGGCTGGGTCTCTGTGTGAATGATAGGCAGTGAGCAGGACACTCT-------C-------AGACT--GCCCACTGAGGACCAGGGGGTGTTCACTGCCCTCCTGAAGGCCCCTGTGGGGTCA--------GTCAGCTGAGCAGCGGGG-CCTAACAGACGCCTTGCATCTG--------ATGTGAGCACTTT-CCATTCCCTACTGCCTGCACTGGGCTGTCCTTAAC-----CCTTCCAGGATAGCT-CTGGGCTCAGCATGC-TTTTCTCAGGGT-----GAGGATGCACTAAGGACCAG-ACAGCAGGTGGAACAGGAC-TCAGGGCTCAGAGCAGCCTG-----AGAGGAAAGAGGAG------GGAAAACACCCTTGG----------------------TAGGTTGTATATGATTGGAGGCT--------TTAAGCTCCAGGCCTTGGTTGGAGCTACTCCGT-GTGGTAGAACTCAGGA-ATTTGTGCTTTCCAGCCTAT--T-GTGAGAGGTCAGGCCTCTGGGTACTAA--T---TAGTTCCTGGGGTCC----------CTCTGGGTGATCTCAGGCCT------------------ACCTCCTTCATATTGCCTATAGGAAGCT-CTGGACAGAGACAA--AAGACCATGAGCTGAGAGGCTAACAGCTGGGGTGTGT---------------------------------------------------------------------------------     
12 Castor_canadensis-NW_017871110.1-169090_169300           79.9%  31.6%    -------------------------GGATCCCCAACCACCCTGGTGTTAGAAGTTATGAAAATGCATCCTTCAGCTGAGCAGTGGCCTCTATTGTCTGTAATTAGTTCTCTTTCTGGAACTTCTGCGGGGGAGAGA----------AACTCTGCCGTCAGCGGGTCCTGGTTTGGGGCAGGAATGGGCTGAGACAGCAAACCTGGCCC-TTGAGATTTGTGCC-TTGCTGCAGCCTGCAAAGGAAGTTCTGTGAGCTTGGGCACCAGACC-GGCC-CCGACACACATGCACACAGGCACGTACACATGTATATACA------CACAGG----CTCTTGGCGTGACAGCTCCT----GACAGCTCCTGCC-TGTGCTCTCATGCT-----AGACAGGTGGTCATGCACTGCTGGAGCAATGACAGCAGCTAGCTTAAGGCCTGTACTGTGTGTG----CGTGAGAGG-GGCAT----------TGAGCACGAGGCTCTCAGATTGCCTGCTGAGGACTATGGGGCACTCA---------------------------------CGGGGCCTTCCTGCGGG----CACTGGGGAGTG--GGGCCTGAGTCTACCTGGGTAG------TA--GGGGCTGGCAGATGACTCATCTGATGTGAGTGCTCCCC---------TT--------CCCACCTGACTGGGGTGGAACATCCCCACTCTTTCAGACCTCTGGGGGCAGC-TCCTGGGCTCAGCAGATCCTTCCTCAGGGTGAGACTGCAACAGGGACCAGGTGACACAG---GA-CATAGGAACCTTGTTGGATCTGGTATGTGTGTGCAAGTGTGAGCAGAAG----GTCCCAGCTTG-------AGGTCTTGGCGTGAAGA--TTCTCTATGGTGGTTGTTCTTGGAGCCATGCTCT----CCCACCTTGTTGTAAG-----GATGCTTGGCCTCTGGGCATTCAATTGGCTATTAGGGTC---------TCTCAGGCCTGGCT-GTGTCCTGGATTCACCAGATGG---------CCTG-----GAGG------AAGCC-CTAGGCAGAGGGAAGACACCCAGATCTG-----------------------------------GGGCTAGCAG-GTGGGTCTCCTGACTGCGTCAGGAGC-------------------ATCTCTGAGGATGGG----------GTCAGGCCTCCTGCGAGCCTCAGCATCAAAAGCAC---------------AAAGCACTTCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
13 Dipodomys_spectabilis-NW_024870976.1-168281_168688       72.1%  24.8%    --------------CCCTGCTACTGGGGCCCCCAACCACTCTGGTGTTAGAAGTTATGAAAATGCATCCCTCAGCTGAGCAGCAGCCTTTATTGTCTGTAATTAGTTCTCTTTCTGGAACCTCTGCGGGGGAGAGA----------AACTCTGCCGTCAGCAGGTCCTGGTTTGGGGCAGGGATGGGCTGAGCCAGCAAACCTAGTCCCACAGCCTTG-CGCC--TGCTACAGCCTGGGAAAGAGGCTATATAAGCTTGGGCTCCAGATTCCCCAACACGTATGTACATGAGCACATATGTCTGCATGCACGTGGACATGTGTGCGCGCG--TGCACGTGCGCGCGCACACA----CACACACACACACACACACACAGAGCTCTT--GG----------CCTGACAGCTCTGCCG------------------------TGTCCAGCCCCTGACAAGCA-------------------------GTCATGCCCGG--------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGAGCCACAGCT---GCCTG------------------CTCCG---------AGTCTGCGCACACGGGCACCA----------------------------GAGGGGCA---------------------------------------------------------------GTGAGCTCTCAGACTGCCCGCTGAGGACAGCGGGGACTGC------CC--CCCCCCACTGCAGACCCTGGTGGAGAC-AGTCTGC-CCGGGCAGCGGGGA------CTGGCAGGTGT--------CTTGCATCTGATGAGATGACCTCCCTTCCCCCATGGGACCCAG-----GACTGGGCCACCCC-ACTTCCTTGTG----------------------AG-----CCTGTGGGGACAGCC-CCGGCCTCAGCAGGACCTTCCTCGGGCTG----CTCTGGGAGCCGGACAGCAG--------GTGACACGGGAC-ATCAGGCCCCGTGTGTCGGCCTGAGCAAGG----GGCCCAGTCTGAGGTCTTGACTTGGG------CTCTGAGATGGAATCTTGGAGTCCATGCTCTTCTGCCCTGTTGTGGGGGCACAGTGAGCACTTGATTGGTTCCAAGGCCTGGTTCTACCAGGGGGCTAGAGGAAGTCCCCCT--AGCTGGCAGTCGGAGGGCAGGGTTGT-----------------GCTCCAGGGCTAG----------TTCTAGAGAGCTACAGGGTG----------------------GG-GGAGGTTGCTGCTCTGGGGCCATTGACCCCAGACCCCAC---------------------ACCTCTGAGG-----------------------------------------------------CCTAGTGGCCTTGGTCCACTT------------     
14 Ceratotherium_simum-NW_004454172.1-183036_183290         67.7%  24.0%    -----------------------CCGGGCCCCCCGTAACCCTGGTATTAGAAGTTATGAAAATGCTCGCTTCAGCGAAGCGGCGGCCTTTATTGTCTGTAATTAGTTTTTCTCTTTCCGGAACCCCTGCTTGGCCGGGGGGAGGAAC---ACGGCGTCAGCAGGTCCTGATACAGGT-GGGGATGGGTGAGTGGGCAAACCTGGCCCT-TGGGCCTCGTTGTC-TTGCTGCAGCCAGGAAAGGGGGTTCTCTGAGCTTGAGCCAGGCCTG-CACC-----------CCGACACGCACGCACACACACGCAGGTGACCACTCCACCAGG----CACGGCCCCTGGCGGCTCCC----GAC---------------------TGTGTT--TCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGACAGGG--T--TG--------TGCCCGGCTGGAGCGCAGG---GA-GCCA---GCTGGCTCAGAGCGTGTGGGTCTGTACATGAATGAGGGGAG--------------CTAGCAGGATGCTCTCAGACTGCTGG--CCGAGGACTAGGGGAGCTCACAGGGCCCTTCCTGAAGGCCCTGGCAGGGCAGAG-----CCTGCCTGGGCAGTGGGGACCTGGCAGACGGCTCAGGCC---------TG-CAGATCAGCCC-AAG---GT--GTCCCTGCCTGC---------CCCA-----TCTCCAGGGGCAGCT-CTGGGGTCAGCAGGCCCTTCCAGAATGGT----GAGGCAGTGCCAGGGGCCGGGAAATAGTCTGGTTTAGGAC-GCAGGGTCCAGATTGGCCTCTGAGGCAGGAAGAGAGAGGAGCGC-CCCTCATGGAAGGGGGTGGGAGTGCCTGCAGGCTCCTGGGTCCTGAAGGTCCA------------------------AAGTCCTGCTTTAACATGCTTCCCGCTGGGAGC-TCTGGGAAGCCCACACCCACCTGCTCCTCCTGGAAGGACTTTGGGCCTCTCATGCGCCCTCCGGGCACATGAGGGGCTCCCTGAGGAGCCCTGTGTCCAGGCCCAGGCCCAGGCCTGGCCATGTCCGGGCTCCGACCAGATCACCTTGAGGAAGCC-CGGGGCAGTGGGGAGAGA--TCCTGCAGCCTGAGGCTGACGGGTGGGG---------------CAGGCTCCGGGCTGGATCTGGAGAGAAGTGA----------------------------------------     
15 Equus_asinus-NC_052181.1-184425_184696                   69.1%  25.1%    ---------------------------GCGGCCAGCCACCCTGGTGTTACAATTTATGAAAATGCATCCTTCAGCTGAGTGGTGGCCTTTATTGTCTGTAATTAGTTTTTCTCTTTCCAGAACCCCTGCTGGGCAGGGGAGAGGAAC---ATGGTGTCAGCAGGTCCTGATTTGGGGCGGGGAGGGGTGAGCAGGCAAACCTGGCCCT-TGGGCCTCATGGTC-TTGCTGCAGCATGCAAAGAGGGTTCTGTGAGCTTGAACCAGGCTCC-ACACCCCAACACACACATGCACACACACACACACACACAGGTGACCGCTCCACCAGG----CATGGCCCCGGGCAGCTCCC----GCC---------------------TGTGTT--TCAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAGACGGGTGGT--CG--------TGCTCGGCTGGAGCGAGTG---GA-ACCA---GCTGGCTCAGAGTGCTTGGGTCTGTGTGTGAATGAGGGG-G--------------CCAGCAGGATGCTCCCAGACTGCTGG--CTGAGGACTGG-GGGCCTCACAGGGCCCCTCCTGCAGGCCCCGGCGGGGCTGGG-----CCTGCCTGGGCAGCGAGGAGCTGGCAGACAGCTCAGGCC---------TG-CGGATCAGCCC-CCA---ACCTGCTCCCTGCCTG---------CCCG-----CCTCCAGGGGCAGCT-CTGGGGTCATCTGGCCCTTCTGGAATGGT----GAGCCTGTGCCAGGGGCCAGGCAATAGTCTGGTTTAGGGC-ATGGGGTCCAGATTGGTCTCCGAGGCAGGAGGAGAGATGAGCGC-CCCTCATAGAATGGGGTGGGAGTGCCCGCAGGCTCCTGGGGCAGAAGGTC-CC------------------------AACTCCTGCTTGAACAGGCTTCTTGCCAGGACCTTGGGGGAAGTCCATGCCCACCTGCCCCTCCTGTAAGGATGATGGGCCTCTCCCACAAGGG---------------GCCCCCTGACGAGCCCTGTGACCAGCCCCA---------------------------------GATTACCTCAAGGAAGCC-TTGGGCAGTGGGGAGAGA--CCCTGCAGCCTGAGGCCAAG--GTGGGG---------------CAGGCTCCAGGCTGGCTCTGGAGAGAAGTGAGCAGGGGGCTGTTGGCCTGGAGCTGTGGACCCCAGACCCT     
16 Lipotes_vexillifer-NW_006774135.1-185073_185440          81.6%  35.3%    ----------------------------GCCTGCGGTCCCCAGGTGTTAGAAGTTATGAAAATG-CATCCTTAGCTGAGTGGCGGCCTTTATTGTCTGTAATTAGTTTCTCTCTTTGCGGAACCGCTGCTGGGCCGGGGGAGGAAGG----CGGTGTCAGCAGGTCCTGGATCCGGGTGGGGACGGGCGAGCAAACTCTACCCTCACT-CAGGCCTCACTGTC-TTGCTGCCACCTGGGAAGAGGGTTCTGCGAGCTTGAACCAGGCCCT-GTGCCCCAACACACACACACACACACAGACACAGACACACATACGGACACACACACA----GACATACACACACAGACACA----CACACAGACACACACACAGACACACACAGA--CACAGACACACACAGAGACAGACACACACACAGACACACACAGACACACACACAGAGACAGAGACACACACACACAGA-CACACAGACACACAGACACAGACACACACACAGACACACACACAGACACACACACACAGAGACACACACACAGAGACACACAGAGACACACACAGAGACACAGACACACACACAGACACACACACAGA--GACACACACACAGACACACACAGACACACA--GACACACACACACACAGACACACACACAGACACACACA---------CACACAGACACACACACACACAGAGCCAACCGCTCCACGAGGCTTGGCGCCCGGCTGCTCCC-TTCTGGGCTCTCATGAGGGACGAGAGGT--TG--------TGCTTGGCTGGAGCGAGGG---GA-GCTG---GCTGGCCCAGAGCATGTGGATCCGTGCGTGAATGGCGGGGGCG----GGGTGGTGTGAGCAGAATGCTCTTGGACTGCTGG--GTGAGTACTGGGGGGCTCACAGGGCCCCTCCTGAAGGCCCCAGCGGGGACAGAG-----CCGGCCTGGGCAGTGAGGGGCCGGCAGATAGCTCAGGCC---------CG-CAGAGCAGC------CACACTGTTCCCTGCCTGC---------CCTG-----GTTCCAGGGGTAGCT-CGGAGGTCAGCAGTACCTTCCAGAACGGC----GAGGCTGTGT---------------------------------CAGGGGCTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
17 Lagenorhynchus_obliquidens-NW_020837953.1-175272_175600  71.4%  26.4%    --------------------------GGTCCCCAGCCACCCCGGTGTTAGCAGTTATGAAAATG-CATCCTCAGCTGAGCGGCGGCCTTTATTGTCTGTAATTAGTTTCTCTCTTTGCGGAACCGCTGCTGGGCCGGGGGAGGAAGG----CGGTGTCAGCAGGTCCTGGATCCGGGTGGGGACGGGCGAGCAAACTCCA-CCTCACT-CAGGCCTCACTGTC-TTGCTGCCACCTGGGAAGAGGGTTCCACGAGCTTGAACCAGGCCCT-GTGCCCCAACACACACACACACACACACACACACACATACAGACAAACACAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGACACAC--------------ACACACA---------CACACACACACACACACGCACGCAGCC-AACCGCTCCAGAGGCTCGGCGCCCGGCTGCCCCC-TTCTGGGCTCTCGCGAGGGACGGGAGGT--TG--------TGCTTGGCTGGAGCGAGGG---GA-GCTG---GCCGGCCCGGAGCGCGTGGGTCCGTGCGTGAATGGCGGGGGCG----GGGTGGTGTGAGCAGAGTGCTCTCGGACTGCTGG--GTGAGTACTGGGGGGCTCACAGCGCCCCTCCTGAAGGCCCCAGCGGGGACACAG-----CCGGCCTGGGCAGTGAGGGGCCGGCAGATAGCTCAGGCC---------CG-CAGAGCAGC------CCCACCGTTCCCTGCCTGC---------CCTG-----CTTCCAGGGGCAGCT-CGGGGGTCAGCAGTGCCTTCCAGAACGGT----GAGGCTGTCA---------------------------------GGGGCTCAGATTGGCCTCGGAGGCAGGACGAGAGACGAGTGC-CCCCCACGGAATGGGTGCGA-GTGGGCACAGGCCTCTGGGGCCTGAAGGTCCG---CCAC---------------CAAGACCTTCCTTGAAAATGCCCCCC-GCTGGAGCTCCGGAG--AGCCCACGCCCCCTGCCCCTCCTGTAAGGAGGCTGGGCCCCTCCCGCACCCCCTGGGCACCAAAGGGGCTCCCCACAAAGCCCTCTGACCAGCCCCAGGACTAGT------GGTGTCCGGGCGCTGTCCAGGCCGCTTCAAGGAGGAC-CTGCCAGTGGGGCCCTG------------------------------------------------------------------GAGGAAGGCCAGCGGGGGGCTGTG---------------------------     
18 Arvicola_amphibius-NC_052052.2-172755_173128             75.6%  28.4%    --------------------------------TAACCACCCTGATGTTAGGAGTTATGAAAATGCATCCTTCAGCCACGC-ACAGCCTTTATTGTCTGTAATTAGTTCTGTCTTTTGGGAACCTCCGTGGGAGAGA----------AACTCTTACACTGGCAAGTCCTGGTTTGGGGCAGGAATGGGCTGAGCCAGCAAACCCAGATCTTTGACCTTGTTTTC-TTGCTGTAGCCTGGAAAGGGGTTTCTGTGGGCATGGATGCCAGACC-TGTCCCTAATGTGCACACATGTACGGACACACACGCACACACGCATGCACACAAAC--------AT------------------------------------------------GTGTGCACACACGTACGTGCGCGCAC---AC---A------------------------------------------------------------------------------------------------------------------TGCGTGCATACACACGTA-----------------------------------------------------------TGCACACACACATACGC----------ACACACATATGCGTACACACACACACACACAC-ACACACACACACATACACACACGCTCTTGACCTGACAGCTCTGCTGTGTCTGGCCCTCAAAGGTTCCTGTGTGTGCACTCATGCTAGACGGGTGGC--C--------ATGCTCAGCTGCAGCAATGA------CAGC---GAC---------TAGCGGGGTCTCTGTGTGAATGACGGGCGGCTAGCAGGACACTCT-------C-------GACTG--CCCACTGAGGACTGTGGGAATGTTCGCTGCCCTTCTGAAGGCCCCTGTTGGGTCA--------GTCAGCTGAGCAGCGGGG-CCTAGCAGACAGCTTATATCTG--------ATGGGAGTACTCC-CCATTCTTTACTGCCTGCACTGAGCCATTCTTAAC-----CCTTCCAGGACAGCT-GTGGGCTCAGCCTGC-TTTTCTCAGGGT-----GAGGATGCACTAAGGACCAG-GCAACAGGTAGAACAGGAT-TCTGGGCTCAGAGCACCCTG-----GGAGGAAAGAGGTG------GGAAAACATCCTGGG----------------------TAGGCTGTGTGCTATTGGAGGGT--------TTAAGCTCCAGGCCTCGGTTGGAGCTACTCCAT-GTGGTATCACTCCCAA-GTCTGTGCTTCCCAGCCCAT--T-GTAAGAGGTCAGGTCTCTGGGTGCGGA--T---TAGTTCCCGGGGTCT----------GTCTGGGTGATCTCAGACCT------------------ACCTCCTCCAAATTGTC--------------------------------------------------------------------------------------------------------------------------------------------------     
19 Tupaia_chinensis-NW_006198262.1-184403_184681            85.8%  44.4%    -----------------------------GCCCCCACCATCCTGAGCTAGAAGTTATGAAAATACATTCCTCAGCTGAGCAGCGGCCTTTATTGTCCATAATTAGTTTCTCTCTTTCCGGAACTCCTGCTGGGCTGGGGAGAGGA---ATCTTCCGTCAGCAGGTCCTGGTTCTAGGCAGGGGTGGGCTGAGCCAGCAAAGCCAGTCTTTGGACTTCACTGCC-TTGCTGAGCCTGGAAA-CAGGGTTGCATGAGCGTAAGCACCAGGCC-CCCAGTGGATGCACACAGGCACACATGCACACAGGCACACACGCACACAGGCACGCTTACGCGCATGCAC----T------------------------------------------------------------TGTGG--CCT----------G--------ATAGCTCTGCCATGTCTGGCTCCTGGTGG-C-----------TCC-----TGTCTTAGATTTCAGATA-------------------GCCAGGCTGTCGTGCCC---AGCTGAAGCCAGGGAAATTGGTTGGTT--CA-----G-----AGCAGGCAGGT-------CTGTGC---ATGAGCAAGGGGCAGC----GAGCAGAGAGCCCTTAGACTGCTCAGTGAGGACTGCAG-------GGGGCTCACAGGG--TCCGT-------------------------------CCTGTAGGCCC-TGGTGAGGATAAGCTCTGCCTGAGTAGT-------------GTGGGGTTGTCAGACA--------GCT-CCCTGCATGTCA----GCAGCCCCCTCTCTCTGCCTTTCAGGGGTGGGGCCATCCCAATC-----------AGCCTCCTGGACTCAGGGGGGCAGCTCTGGGGTCAATAGGCCCTTCCACAGAAATGAGACTGGGGA--------CCACGC----------------AGCAGACTCACTAACGATGTG---AGGTCTTGAGCAGCTCTCAATGC--AGGAGAAAAGATGCCCCTC-GTGGGATTGCTGGGAGTGTGCACAGGTTCTAGGGCCCAAAGGACCCAGGTGAGCCTTGGTTTGGAATGCTCTGGGCAGGGG----TGGGCTGAGCCAGCAAAGCCACCCTTTGGACTTCATGGCAGCTCAGG----AAGCCCATGCTCACTTGCTTCTTTTG---GAAGGATGCACAGGCTCCCCA-AGTCCCTCTGACCAGCCCCA------------------GGTGTGGCTGGTTCCTGGCTCCATCTAGGTCACCTTGAG--------GAAGCCTTGGACA---GT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
20 Microtus_ochrogaster-NW_004949136.1-173232_173581        71.9%  26.2%    --------------------AGCAGCTCTCGGTAACCACCCTGATGTTAGGAGTTATGAAAATGAATCTTTAAGCCATGC-ACAGCCTTTATTGTCTGTAATTAGTTCTGTCTTTTGGGAACCTCCATGGGAGAGA----------AATTCTTACGTTGGCAAGTCCTGGTTTGGGGCAGGAATGGGCTGAGCCAGCAAACTCAGATCTTTGACCTTGTTTTC-TTGCTGCAGCCTGGAAAGGGGTTTCTGTGAGCATGGATGCCAGACC-TGTCTCTAATGTGCACACATGTGTGGACACACACACGCATGCACACACATGCGCGC------------------------------------------------------------------ACACACACACATGCGCAC---AC---A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCACGCACACACACGC----------ATGCACACACACGCGCGTACACACACACACAC-ACACACACACCCATGCGCGCTTGCTCTTGACCTGACAGCTCCGCTGTGTCTGGCCCTCAAAGATTCCTGCATGTGCACTCATGCTAGACGGGCGGT--C--------ATGCTCAGCTGCAGTAATGA------CAGC---AAC---------TATCGGGGTCTCTGTGTGAATGACGGGCAGCTAGCAGGACACTCT-------C-------GACTG--CCCACTGAGGACCGTGGGAGTGTCTGCTGCTCCTCTGAAGGCCCTTGTTGGGTTA--------GTCAGCTGAGCAGCGGGG-CCTAGCAGACAGCTTGTATCTG--------ATGGGAGCACTTC-CCATTCTCTACTGCCTGCACTGAGCCATTCTTAAC-----CCTTCCAGGACAGCT-CTGGGCTC---------------AGGGT-----GAGGATGCACTAAGGACCAG-GCAACCCCTAGAACAGGAT-TCAGAGCTCAGAGCGCCCTG-----AGAGGAAAGAGGCA------GGAAAACACCCTGGG----------------------TAGGTTGTGTGTTATTGGAGGGT--------TTAGGCTCCAGGCCTTGGTTGGAGCTACTCCAT-GTAGAATCACTCCGGA-GT--CTGCTTCCCAGCCCAT--T-GTGAGAGGTCAGGCCTCTGGGTGCTGA--T---TAGTTCCCGGGGTCT----------GTCTGGGTGATCTCAGACCT------------------ACCTCCTCCAAATTGCCTATAGGACAGA-GACGAAAGACCATG--AGCAGAG---------------------------------------------------------------------------------------------------------------     
21 Nannospalax_galili-NW_008355419.1-167336_167684          76.4%  28.0%    -------------TCCACACTGCCTTGACCCCCAGCCACCCTGATGTTAGTAGTTATGAAAATGCATCCTTCAGCTGAGC-ATGGCCTTTATTGTCTGTAATTAGTTCTGTCTTTCGGGAACCCCTAAGGAGAAGA----------AACTCAACTGTCAGCAGGTCCTGGTTTGGAACAGGAATGGGCTGAGCCAGCAAGCCTGGCCCTTGGGCCTTAT-TACCTTGCTGCAGCCTGGAAAGGGGTTTCTGTGAGTGTGGATGCCAGTCC-TGCCCTTAACACATACATGTATGGGTGTGCATACACACACTTATGCACACGACACA-----CACACATGCACACACACACG----TACGTGCACACTCATGCACTCACACAGGCTCTTGACCTGACAGCTGTATCTGGCC--CTT---AGAGGTTC--------CTACATGTCAACTCATG-------------C-----------TAGACAGGCAGTTATGCTCGGCTGG---AGCAATGGGTCTC------------TGTGTGAGTGATGGGCAGTGAGCAAGACGTTCTCAGACCGTCCACCAAGGACCACGTGGGTATTTGTTGCCCTCCTGAAGGCTCCAGTGGGGTCACTCTGC----------------------TGAGCGGCAAGGGCTAG-CCATGGCTTGCATCTGATGTAAGCTCTTCCCTTTCCCGGCTGCCTGTGCCAGGACACCCCTATGCCCTTTGCCTCTCTGGGGGCGAGGAAAGCA--------------------GCTCTGGGCTCAA------TAGG---TCT---------TCCTTGGGGTAAGACCTAAGGGTCAGGCATTAGGTGGAACAGGTT-------T--CGGCACCCAGAGATGCCTGGGAGGCCAGAGG-----AGGAACACCTTTGTTGGACTGGGTGTGGGCAAGCGCAGTGTAAGCCGAGGTCTAAGC-TCCAGGGTGAGGCTTGGAGGTG--CTCTGTGTGCTAGCACAGT-CCATGCTTTCCAGCCTGTTGTGAGATGTGTGGGCC-----CCTGG----------------------ATAC-TTCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTCCTGGGGTTC----------CTCTAGATGGTCCCAGCCT-------------------GGCTCCACCAGATCACCTGTAGGCAGCA-CTGGGCAGAGAGGAGAGACCCTGAGTGGAGG----CTAGCAGG-------------------------------------------------------------------------------------------     
22 Microtus_oregoni-NW_024543064.1-171751_172103            80.8%  35.0%    ----------------------------TCGGTAACCACCCTGATGTTAGGAGCTATGAAAATGCATCCCTCAGACACGC-ACAGCCTTTATTGTCTGTAATTAGTTCTGTCTTTTGGGAACCTCCATGGGAGAGA----------AACTCTTACGTTGGCAAGTCCTGGTTTGGGGCAGGAATGGGCTGAGCCAGCAAACTCAGATCTTTGACCTGGTTTTC-TTGATGCAGCCTGGAAAGGGGTTTCTGTGAGCACGGATGCCAGACC-TGTCCCTAATGTGCACACATGTGCGGGCACACACGCACACACAAACACATGCACGCACACACACATGCGCGCACACACACG----GACATACACACACATGCACACACAAACACATGCACGCACACACACATGCGCGCAC---AC---AC----AC--------GGACATACACACACATGCGCACACACACATG-----------CACACACACACATGCGCGCGCACAC---ACACATACAC--A------------CATATGCGTGCACACACACGCAC-ACACACACGCACACACAAACACATGCACGCACACACACATGCACGCACACACACGTACATACACACACATGCGCGCACACACACGGACATACACACATATGCGTGCACACACACAC-ACACACACACACACACACACACGCTCTTGACCTGACAGCTCCGCTGTGTCTGGCCCTCAAAGGTTCCTGCGTGTGCACTCATGCTAGACGGGCGGT--C--------ATGCTCAGCTGCAGTAATGA------CAGC---AAC---------TATCGGGGTCTCTGTGTGAATGACGGGCAGCTAGCAGGACACTCT-------C-------GACTG--CCCACTGAGGACCGTGGGAGTGTCTGCTGCCCCTCTGAAGGCCCCTGTTGGGTCA--------GTCAGCTGAGCAGCGGGG-CCTAGCAGACAGCTTGTATCTG--------ATGGGAGCACTTC-CCATTCTCTACTGCCTGCACTGAGCCGTTCTTAAC-----CCTTCCAGGACAGCC-CTGGGCTCA---------------GGGT-----GAGGATGCACTAAGGACCAG-GCAACACCTAGAACAGGAT-TCAGGGCTCAGAGCGCCCTG-----AGAGGAAAGAGGGG------GGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
23 Propithecus_coquereli-NW_012152752.1-174675_174877       81.7%  29.0%    ----------------------------CCCACAGCAACCCTGGTGTTAGAAGTTATGAAAATGCATCGTTCAGCGGAGCCGCGGCCTTTATTGTCTGTAATTAGTTTCTCTTTCCGGAAGCCCCGCGGTGCGGCGAGAGGAGCTCC----GCCTGTTCGCAGGTCCTGCCGGGCGGTGGGGAGGGCTGAGCCGGCAGAC-CCAGCCCTCAGGCCTCG-ACCC-TTGGCACAGGCTGCAAAGAGGGTCCCGCGAGCTCAGCCAGCCCCTGCACGCCCCGATCCACATGCACACACACACTCCGCA----AGGCCGG----------------------CCCTGCGCCCTCGC----AGTGGG--------TGGTCGCGCCTGGCTG--GGGCGAGGGCAGCACGTGGCGTGTGCGGAGTGAGGGGAC-------------GGTGCTCTCAGGGGCTTGCTGAGTGC-----------C--------GCAGAGTCTCGCAGG--CCCTCTTGAAGGCCCCGGGGGGGACAGGGTCTGCTG-------------------------------------------------GGCAGTG-----------GGGGCTGGCGGGCGGCTGGCA--TCGGCACCCTGGCACCC--------CTGCCTGCCCAGG---------CTGAGCCACACTCCCTTCCTGACCCTGGGGCAGCTCTGGGGTC--------AGCAGGCCTTC-GCCCAGGCAACAGGCTGACTTGGGATGC--GG-TGCCGAGAGCGGCCTTGGAGCGGAAGGAGGGACAAACGCCCGTCCTTGAATTGGACGCAGGTGCACAGGCCCC-----------------CCCTC-------CAAGTCTCTGCCTGAAAAAGCTCTGGGAGGGCCACACGCACCTGCGCCTTTTGA------------------AG-----GACCGTGGGCCTCTGGGCACGCACTTCCACCCCCTGGCCCCACGCCTGCCCCAGGCCTGGCC-CTGTCATCGTT------CCAAC---------CAGA-----CCTCCTGAGGAAGCC-CAGGACAGGTGGAGCCGGGGCAGAGGGC---------GTTGC---------------------CGTGG-AGCC-ACGGGCCTCGGACCCCAGCCCTGGGCAGCT------CAAAGTGG-CCCTTCTCCACGGTG--GTCAG---GCCAGCCGGTCTGGGAGCACCTGGTCTGGGAGCAC--------TTGGCCTCCCCGCCCACCTGTGCGGCCACCCTCTGTAGGTGCTCTGGGGCCGAGGGAGGGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
24 Mesocricetus_auratus-NW_024429219.1-173572_173777        60.7%  18.7%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTGACCCC--------------CAACCACCCT----GGTGTTAGGAGTTATGAAAACGCATCCTTC--AGCCAAGCCTTTATTGTCTGTAA---TT---AG-------------------TTCTGTCTTTTG-GGAGCCTCCATGG-----------GAGAGAAAGTCTTACGTTAGCAGGT---CC----------T------------GGTTT-GGGGCAG--AAATGGGC-TGAGCC-AGCAAACCCAGA-----------TCTTTGACCTTGTTTCCCTGCTGCAGCCTGGAAGGCGGTTTCTGTGAGCATCCCTAACACACAGACATGTATGGACACACACACAC-ACACACACACATACACGCACACACTCTTGTCCTGACAGCTCTGATGTGTCTGGCCCTCAAAGGTTTCTGCATGTGCACTCATGCTAGACAGGCAGT--C--------ACGCTCAGCTGCAGCCATGA------CAGC---TAC---------TGGCGGGATCTCTATGTGAATGACAGGCAGTGAGCAGGACACGTG-------T--GCTCAGACTG--CCCACTGAAGACCGTGGGAGTGATCGCCACCCTCCTGAAGGCCCCTGTTAGGGCA--------GTCAGCTTATTAGTGGGG-CCTAGCAGACGGCTTGCATCTG--------ATGTGAGCACTTT-CCATCCCCCACTGCCTGCACTGGGCCGTCCCTAAC-----CCTCCCAGGACAGCC-CTGGGCTCAACATGC-TTTTCTCAGGGT-----GGGGATGCACCAG------------------GAACAGGAC-TCAGCGCTCAGGGCAGCCTG-----AGAGGGAAGAGGAG------GGAAAACACCCTTGG----------------------TAGGTTGTGTACAATTGGAGGGT--------TTAAGCTCCAGACCTTGGTTGGAGCTACTCCAT-GTGGTAGCCCTCAGGA-GTTTGTGCTTTCCAGCCCAT--TGTTGAGAGGTCAGGCCTCTGGGTACTGA--T---TAGTTCCTGGGGTCC----------CTCTGGGTGATCTCAGGCTT------------------ACTTCCTTTAAATTGCCTATAGGAAGCC-CTGGGCAGAGACTAAAAAGACCATGAGCTGAGAGGCTAACAGCTGGGGTGTGTTGGCAGGATGGAGTTCCAGGGTTGAGTCT--GGAAAGGAAGTTGTAGGGCTGTTGCCCTGGAGACATGGACCTTG------     
25 Meriones_unguiculatus-NW_018657773.1-171432_171758       81.9%  33.5%    ----------------------CCTTGACCCCCAACCACCCTGCTGTTAGGAGTTATGAAAATGCACCCTTCAGCCAAAC-ACTGCCTTCATTGTCTGTAATTAGTTTCGTCTTTTGGGAACCTCCACGGGAGAGA----------ACCTCTTACGTTAGCAGGTCCCGGTTTGGGGCAGGAATGGGCTGAGCCAGCAAACCCACATCTCTGGCCTCATTTTC-TTGCCTTAGCCTGGAAAGGGGTTTCTGTGAGCATGAGTGCCCCAGC-ACTCGCACACATGTGGACATGGACACACACATACATGCACACACAGAGACAAAGACACACACACACACACACACACACAC----------ACACACACACACACACACAAACTCTTCTAGCCTGATGGCCCTGCTGTGTC--TGG---CCAGGTTC--------TTGCTTGTGCACTCACGCAGACAG-------------------ACAGTCGTACTTAGTGTGGGAATGACACTGGCTGTGTCTC------------TGTGTGAGTGATGGGTAGTGAACAGGGCACTCTCAGACCACCCGCTGAAAACCACAGGACTGTCCGCTGCCACCCTGAGGGCTCCCGTTGGGGCAGT----------------------CAGCTGAGCAGTGGGGCCTAGCAGATGGCTTGCATCCGAGATGAGCATTTTCCCATCCCCTGCTGCCTACACTGGGTCTTAGCCATTAACCCTTAACCCTTAACATGACCAGGACA--------------------GTTCTGGACTCAG------CATG---C------------TTTTCTCAGGATGCTTAAGGGCCAGGCAGCAGGCAGAACAGGGC-------T--CAGAG-------CAGCGTGAGAGGAAAGAGGAGG--AAAAAGACCCGTGGTGGTTAGGTGTGATTG---------GAGGGTTGAGCTTCATGA-GGTAGCACTCAGAGTCTGTGCT------TTCTGAGTACTGATT-AATTCCTGGGGTCCCTCTCGAGGGC-----------------CCCAGGGAGGGAC-CCCAGGCCTAGCTGC-----TTCAGATT-----GCCTATAGGCTGCCCTGGAC-AGAG---A-TGAAAGGCCA-TGAGCCGAGAGGGTAGCAGGTGGTGTGTGAAGGTGGATG------GAGTTACAGGATTGG----------------------TAGGGAAAGGAAGTTTCGGGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
   clustal