RNAcode could not find significant results in the alignment.
GCAGCTGCTGCACAAGCTCAACGTGAACCTGCCCCGGCAGAGGGTGAAGCAGATGTTCAGGGTGAGCTGGGGGGAGCCCTACCTGGGCTCCAGAGCCAGGGCTGCACGGGGGCTGTGCTTGTGTGGCTGGGAGCCTGCCAGCCCTGACTGAGCTGGAGGGGACCCTGGCAGTGCCCTCAAGCTGCACAGAGTAGCTGGCTGCTGAGGATGGGGCTGTCTGACCAGCCACCCCACAGCCTATGGCAGGCAGGCAGGTGGGTGCCCAGGTGCTGCCTCTTTGCAGCTGGGCCGGGGGCTGCTCTGCCAGCTCTGGGGAAAGTGGTCGGGGCACCTGGCACAGGCCCTGCCAGGTGAGTGGACTGGGCATTCAGGGCAGGTGCCCAAATGAAGCTGCACCCCCTTCCCAGGCCCCAGCCCCGCAGCCTCGAGGGGGGTACACCAGCCCTGGCAGGGCCCAGTCTGATGCGCAGCAGCTCGTTACTTTCCCCATGCCGCCCTCGCCCAACCACCCTGATGTTAGGAGTTATGAAAATGCAGCCTTCAGCTGAGCTGCGGCCTTTATTGTCTGTAATTGGTTTCTGTTTCCGGAAAGCCTGCTGGGCCGGGGGAGAGAAACTCTGCCCGTCAGCAGGTCCTGGTTCCGGGTGGTGCTGGCTGAGCCAGCAAACCAGGCCCTGGGGCCTTGCTGCTTTGCTGCAGCTTGGAAAGCGGGTTCTGTGGGTGCAAGTGCCAGGCCCTGGGGTCTCTGACACGCACATACACGCACACACACGCACACGCATGCACGTGCATAAATACACGCACACACGTGCACATACACATATGCACACAGGCACACACATGCACACACACACGCATACACATGCTCACAGCCTGACAGCTCCGCCGTGTCCAGCCCCTGCCAGCTCCTGCCAGCTCCTGCCAGCTGCTGCCTGTTCTCACTGTAGGTGGCTGGTCATGCCTGGCTGGAGCAAGGGAAGCTGGCCTGCTCACAGGACAG
Sequences in the aligment must have a pairwise distance to any other sequence of 10.0%.
Sequences can only have pairwise distance to the input sequence of 60.0%.
Sequences are searched in the RefSeq Representative Genome Database.
Reference sequence (1): Target Identities normalised by aligned length. Colored by: consensus/70% |
cov pid 1 [ . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . . . : . . . . 4 . . . . : . . . . 5 . . . . : . . . . 6 . . . . : . . . . 7 . . . . : . . . . 8 . . . . : . . . . 9 . . . . : . . . . 0 . . . . : . . . . 1 . . . . : . . . . 2 . . . . : . . . . 3 . . . . : . . . . ] 1399 1 Target 100.0% 100.0% -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCTGCTGCACAAGCTCAACGTGAACCTGCCCCGGCAGAGGGTGAAGCAGATGTTCAGGGTGAGCTGGGGGG-AGCCCTACCTGGGCTCCAGAGCCAGGGCTGCACGGGGGCTGTGCTT--GTGTGGCTGGGAGCCTG-------CCAGCCCTGACTGAGCTGGAGGGGAC-CCTGGCAGT--GCCCTCAAGCTGCACAGAGTAGCTGGCTGCTGAG---GATGGGGCTGTCTGACCAGCCACCCCACAGCCTATGGCA-GGCAGGCAGGTG--GGTGCCCAGGT-GCTGCCTCTTTGCAGCTGGGCCGGGGGCTGCTCTGCCAGCTCTGGGGAAAGTGGTCGGGGCAC--CTGGCACAGGCCCTGCCAGGTGAG--------TGGACTGGGCATTCAGGGCAGGTGCCCAAATGAAGCTGCACCCCCTTCCCAGGCCCC----------AGCCCCGC-AGCCTCGAGGGGGGTACACCAGCCCTGGCAGGGCCCA------GTCTGATGCGCAGCAGCTCGTTACTTTCCCCATGCCGCCCTCGCCCAACCACCCTGATGTTAGGAGTTATGAAAATGCAGCCTTCAGCTGAGCT-GCGGCCTTTATTGTCTGTAATTGGTTTCTGTTTCCGGAAAGCCTGCTGGGCCGGGGGAGAGAAA--CTCTGCCCGTCAGCAGGTCCTGGTTCC-GGGTGG-----------TGCTGGCTGAGCCAGCAAACCAGGCCCTGGGGCCTTGCTGCT-TTGCTGCAGCTTGGAAAGCGGGTTCTGTGGGTGCAA-GTGCCAGGCCCTGGGGTCTCTGAC--ACGCACATACACGCACACACACGCACACGCATGCACGTGCATAAATACACGCA--CACACGTGCACATACA--CA----TATGCA----CA----CAGGCA--------CACACATGCACACACACACGCATACACA--TGCTCACAGCC------TGACAGCTCCGCCGTGTCCAGCCCCTGCCAGCTCCTGCC---AGCTCCTGCCAGCTGCTGCCTGTTCTCACTGTAGGTGGCTGGTCA--------------------------------TGCCTGGCTGGAGCAA--GGGAAGCTGGCCTGCTCACAGGACAG------------------------------------------- 2 Callithrix_jacchus-NC_048389.1-186478_187407 95.5% 69.8% --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGACGGCAGCCTGAGCGTCAGCGAGGTCCTGCGGCTGCTGCACAAGCTCAATGTGAACCTGCCCCGCCAGAGGGTGAAGCAGATGTTCAGGGTGAGGCTCACGG-GGTCCTGCCCGGGCTCCGGAGCCAGGGCTGC--ATGGGCTGTGGTG--GTGTGGCTGGGGGCCAG-------CCAGCCCTGCCTGAGCTGGAAGGAC--CCTGGCGGT--GCCTTTGAGCCGCACAAAGTGGCCA-CTGCCGAG---GAGG-GGCCGCCTGGCCAGCCATCCCACAGCCTATGGCA-GGCGGGCAGGTGGGGGTCCCCTGGT-GTCTCCTCTTGGCAGCTGGTTTGAGGTCTGCTCTACCAGCTCCAGGGAAAGTGGTCAGGGCAC--CTGGCACAGGCCCTGCCAGGTGAG--------TGCACTGGCA-TTCAGGGCAGGTGCCCAAATGAAGCTGCAGCCCCTTCCCAGGCCCC----------CAGCCTCACAGCCTTGAGGGGGGTACA-CTGGCCTACTGGGG------------CACAGTCCGATGCGCTTGTTACTTTCCCCACGTGGCCCTCGCCCAACCACCCTGATGATAGGAGTTATGGAAATGCAGCATTCAGCTGAGCT-GCCGTCTTTATTGTCTGTAATTAGTTTCTGTTTCCGGAAAGCCTGCTGGGCTGGGGGAGAGGAA--CTCTGCCCGTCAGCAGGTCCTGGTTAC-GGTGAC------------GCTGACTGAGCCAGTAA-ACCAGGCTCGGGGCGTTGCTGCT-TTGCTGTGTCTTGGAAAGAGGGTTCTGTGGGTAAGA-GTGCCAGGCCCTGGGGTCCCTGAC--ATGCACACATGCACGCACACACATGTGCACACACACATGCACACACATGTATA--CAGGCACACACACACA--CA----CGCTCA----CA----GCCTGA--------CAGCCCCTCCACATCCAGCCCCTGCCAGCTCCTGCCTACTC------TGGCCTGTTCTCACTGTATATGGC---------TG---------GTCATGCCTGGCTGGAGCAAGGGAGGCTGGATG---CTCACAG------CATG-GG------------------GTGTGTGCCTGAGTTAG--GGGCCGGATGCTTG------------------------------------------------------- 3 Aotus_nancymaae-NW_018508829.1-107396_108119 94.2% 66.1% --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAGCCTGAGCGTCAGTGAGGTCCTGCGGCTGCTGCACAAGCTCAACGTGAACCTGCCCCGCCAGAGGGTGAAGCAGATGTTCAGGGTGAGGCTTCGCAGGGTCCTGCCCGGGCTCCGGAGCCAGGGCTGCACTGGGGCTGTGGTG--GTGTGGCTGGGGGCCAG-------CCAGCCCTGCCTGAGCTGGAGGGAC--CCTGGCGGT--GCCTTCGAGCTGCACAAAGTGGCCAGCTGCCAAG---GAGG-GGCCGCCTGGCCAGCCATCCCACAGCCTATGGCA-GGCGGGCAGGTGGGGGTCCCCTGGT-GCCTCCTCTTTGCAGCTGGGTCGAGGTCTGCTCTACCAGCTCCAGGGAAAGTGGTCAGG-------------------------------------------------------GCAGGTGCCCAAATGAAGCTGCAGCCCCTTCCCAGGCCCC----------CAGCCTCACAGCCTTGAAGGGGGAACA-CTGGCCTGGTGGGG------------TGCAGTCTGACACGCTTGTTACTTTCCCCATGTGGCCCTCGCCCAACCACCCTGATGATAGGAGTTATGAAAATGCAGCGTTCAGCTGAGCT-GCCGCCTTTATTGTCTGTAATTAGTTTCTGTTTCCGGAAAGCCTGCTGGGCTGGGGGAGAGGAA--CTCTGCCCGTCAGCAGGTCCTGGTTAT-GGGTGG-----------CGCTGGCTGAGCCAGCAAATCAGGCCCAGGGGCCTTGCTGCT-TTGCTGAGTCTTGGAAAGAGGGTTCTGTGGGTGAAA-GCACCAGGCCCTGGGGTCCCTGAC--ATGCACACATGCACACACACACACGGGCACACACACAGGAGTGCCTGGCGCTC--CAGCCCCGTGCAGTGG--CC----CTGGTG----TT----TGGTGG--------TCAAGCCAAACATGGCTGGCATTGCCCAGCACGGCCTAATC------AGAGAGCCCTGCATGGTGGATAAAGGCTTGGCTTCA------GCTTCATTTCCTCCAACCGAAGCTAAGGCTGGAAGTGGCTGGACC------CAGAGCG------------------GGGCGTAATTGCCAAAG--G-GCACGCTGGGTGGGCACTGAGGCAGGCTCGGCCAGGGTGCGG------------------------- 4 Cercocebus_atys-NW_012001716.1-205368_205923 93.1% 58.9% -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCACCTGGGTCACTGGCCTGCGCTACCTCATGGCCGGCATCAGCGA---------------------CGAGGAC------AGCCT--GG--------CTCGCCGCCAGCGCACCAGGGACCAATATCCTTGGGCACTGAGCAG--GCAGGGCAGACCCAGGGACCGGCCTCTTGGCTGCCCACCCTGGGAGGGCC-CCTGCCCTT--TGCC----GGGTCACATGTTGGGGAAGCGGCCAGTAGGCTGGGGTCCCCTATTCCTTCCTCCCTAGGCCAGAGGGT-G--GGGGCGGTGGAGCTGGACCCGTGGATCCCTGTTGGCCCCTAACTCGGCACCAAAG-TGGCTGAAGCA-GACGTTTGATGAGGCCGA--CAAGAACGGGGATGGCAGCCTGAGCATCGGCGAGGTCCTGCAGCTGCTGCACAAGCTCAACGTGAACCTGCCCCGGCAGAGGGTGAAGCAGATGTTCAGGGTAAGGCGAGCCTCGAGGGGAGCA------------CCCCAGCCC------TGGCGGGGCCCAGTTTCTTGTTACTTTCCCCGTGTGGCCCTCGCCCAGCCACCCTGATGTTAGGAGTTATGAAAATGCAGCCTTCAGCTGAGCT-GCGGCCTTTATCGTCTGTAATTAGTTTCTGTTTCCGGAACGCCTGCTGGGCCGGGGGAGAGAAA--CTCTGCCCGTCAGCAGGTCCTGGTTCC-GGGTGG-----------CGCCGGCTGAGCCAGCAAACCAGGCCCTAGGGCCTTGCTGCT-TTGCTGCAGCTTGGAAAGTGGGTTCTGTGGGCGCAA-GCGCCAGGCCCCGGGGTCTCTGAC--ACACACACAGGTGCACACACATACATGCACGTGCATAAATACGTGCACACACA--TGTGCACA--CACACA--TA----TGCACA----CA----GGCACG--------CACATGCACACGCGTGCACACACACACACATGCTCACAGTC------TGACAGCTCCGCCGTGTCCAGCCCCTGTCAGCTCCTGCC---TGCTCCTGCCTGTTC----------TCACTGTAGATGGCTGGTCA------T--------------------------GCCTGGCTGGAGTGA--GGGAGGCTGGACTGTTCACAGCACGGGGTTTGTGCGT-------------------------------- 5 Galeopterus_variegatus-NW_007727608.1-240063_240782 91.3% 50.1% ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGACGGCAGCCTGAGCATCGGGGAGGTCCTGCAGCTGCTGCACAAGCTCAACGTGAACCTGCCCCGCCAGAGGGTGAAGCAGATGTTCAAGGTGAAGCCCGGGCCGGCCACGATGCTCGGCGTC-CCCACCAGGGC------------------TCCAGCCGGGGCCGCGCGGGGCTGCGGTGGTGCCTGGGCTGGAGGGGCC-CGCGGGGTG--GTCTG----------------------TGCAGCTGAGGAGAGGGCAGCATGACCAGCCCCGT--GGAGCTGTGGAG-GGGTGGGTGGTCAGGGGCCACTGG--GACGCCACTCTGCGGCTGTGCT--GGGCCTCTCTGCCAGCTCCCAGGGAAGGGGGCCAAGCAC--CAGGCAAG------------------------TGGACTGGC-ATTTGGGACAGGCGCCCACATGAAGCCACGTCCCCTTTCCAGCCCCCCGT--------GACCCCACAGGCTTA-ATGGGGTGCACCAGTCCT-------------------GCAGGCAGCAGCTCTCCTTACCTGCCCCATGCCGCCTCTGGCCCCAACCCCCTGGTGCTAGAAGTTATGAAAATGCATCCTTCAGCTGAGCC-ATGGCCTTTATTGTCTGTAATTAGTTTCTCTTTTTCCGGAACCCCTGCGGGCCGAGGAGAGG-A--CTCTGCCCGTCAGCAGGTCCTGGTTTGGGGAGGG-----------CAGAGCCTGAGCCAGCAAACCCAGCCCTGGGGCCTCATTGCT-TTGCTGCAGCCAGAAAGAAGGTTCTGGGGGCGTGCG-CACCAGGCCCCTGCACCCCCCGAC--ACACGTGCATGCACACGCACGCATGCGCACATGCTCATGGCCTGGCAGCCCGC--TGTGCCCGCATGATGG--AT-----GGGCA----GT----TG------------TGCCCCCTGGAGCACGTGGATCTGCACAAGTGAGGGTGGTGAGCAGGTGCTTGCTGAGGACTGGGGGCCATGGAGTCCCGCCAGAA---GGCCCCGGTGGGGACGAAGCTC-GTTGGCTCACACCTGCTCACCAGCACCCGCTTTTG------------------CTGCCTGCCTGGGGCTG--AGCCA----TGTCCACCACCACCCCAGCCTCTGGGGCAGCTC--------------------------- 6 Tupaia_chinensis-NW_006198262.1-184156_184681 93.3% 47.7% --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGAGCATCGGCGAGGTCCTGCAGCTACTGCATAAGCTCAACGTGAACCTGCCCCGGCAGAGGGTCAAACAAATGTTCAAGGTGAGGCTGAATGCGCGGCTGGGGCCAGGCCCTTGTTGGGCTTGGGAGTC------CCTA--CTAGGGCTACCTGGGGA--CCACGGTTGTGCTGCCG-GGTTGGAGGGGT-------------------------ACCAGGGTGGCCTGCAGCAGATG--ACAGAAGGCAGCTGACCAGCCATCCAGGACTGGAGGACA-CGGGGGGTCGTCAGGG--CCCAGC--GTACCGCCTCTATAGCTGTGCCAGGGGCTGCTGTGCCAGCTTCAGGGAAGGGGCTTGCCACAC--CAGGCACAAGCCCTGCCCAGGTG-------AGTGGACAGAC-ATTTGAGGCAGGTGCCCAAATAAAGCCAACCCCCTTCCTGCCCCCCA----------CAATCCTACAGCCTTAATAGGGGAGCACCTGCACAGGCAGGGCCCTGTCTGGCAGGCAGGCAGCAATCTCCATACCTGCCCTAGGCCAGCAATGGCCCCCACCATCCTGAGCTAGAAGTTATGAAAATACATTCCTCAGCTGAGCA-GCGGCCTTTATTGTCCATAATTAGTTTCTCTCTTTCCGGAACTCCTGCTGGGCTGGGGAGAG-G--AATCTTCCGTCAGCAGGTCCTGGTTCTAGGCAGG-----------GGTGGGCTGAGCCAGCAAAGCCAGTCTTTGGACTTCACTGCC-TTGCTGAGCCTGGAAACAGGGTTGCATGAGCGTAAG-CACC-AGGCCCCCAGTGGATGCACACAGGCACACATGCACACAGGCACACACGCACACAGGCACGCTTACGCGCATGCA--CTTGTGGCCTGATAGC--TC------TGCC----AT----GTCTGG--------CTCCTGGTGGC------TCCTGTCTTAGATTTCAGATAGCC----------------AGGCTGTCGTGCCCAGCTGAAGCCAGGGA---AATTGGTT--GGTTCAGAGCAGGCAGGTCTGTGCATGAGCAAGGGGCAGCGAGCAGAG------------------AGCCCTTAGACTGC-------------TCAGTGAGGACTGCAGGGGGCTCACAGGG-------------------------------- 7 Lagenorhynchus_obliquidens-NW_020837953.1-174820_175600 89.6% 44.9% -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGCAGCCTGAGCATCGGGGAGGTCCTGCAGCTGCTGCACAAGCTGAACGTGAACCTGCCGCGGCAGAGGGTGAAGCAGATGTTCAAGGTGAGGCCGGCGGGGCCGCCAGG----------------------GTCCTGGGG--ACAG--GCGTGTGTCCGGCAGCA-----GGCCGGCCCTGTCCAAGCTGCAGGAGGTCCCAGGCAGT--GCCG-------------TCCAAGCTGCAGGAAATGGCAGGGAAGCAGCTGTCC----------TGCACCTGTCCGG-GG-CGGTCAGTCAGATGCCCCAAGCTGCCCCCTGTTCGCAGCTGTGCCGGCACCA----------CTGCAG--CAGCTCCTGGGGCCTCCCCAGGCCGGCGGACCGGACATG-TG---GGCAGGCGCCGGGTCAGCGAGGGGAAGCACCCGCAGGAC-CTGCACCCCACGTCCCACACTG-----CCCCGCGATTCCCCAGACTTA------------GTGGGGTGCACGGGCCCTGCCTTTTGGGCAGCAGCTCTGGTTACCCACCGCGCA---GCCTGTGGTCCCCAGCCACCCCGGTGTTAGCAGTTATGAAAATGCA-TCCTCAGCTGAGCG-GCGGCCTTTATTGTCTGTAATTAGTTTCTCTCTTTGCGGAACCGCTGCTGGGCCGGGGGAG-GA---AGGCGGTGTCAGCAGGTCCTGGATCCGGGTGGG------------GACGGGCGAGCAAACTC-CACCTCACTCAGGCCTCACTGTC-TTGCTGCCACCTGGGAAGAGGGTTCCACGAGCTTGA-ACCAGGCCCTGTGCCCCAACACAC--ACACACACACACACACACACACATACAGACAAACACACACAGACACACACACA--CACACACACACACACACACG----CACGCAGC--CAAC--CGCTCC--------AGAGGCTCGG----CGCCCGGCTGCCCCCT---TCTGGGCTCTCG--CGAGGGACGGGAGGTTGT--GCTTGGCTGGAGCGAGG--GGAGCTGGCCGGCCCGG---AGCGCGTGGGTCCGTGCGTGAATGGCGGGGGCGGGGTGGTGTGAGCAGAGTGCTCTCGGACTGCTGGGTGAGTACT--GGGGGGCTCACAGCGCCC--------------------------------------------------- 8 Globicephala_melas-NW_022134856.1-175232_175584 88.3% 45.8% ------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACGTTTGACGAGGCCGACAAGAACGGCGACGGCAGCCTGAGCATCGGGGAGGTCCTGCAGCTGCTGCACAAGCTGAACGTGAACCTGCCGCGGCAGAGGGTGAAGCAGATGTTCAAGGTGAGGCCAC-GGGGCCGCCAGG----------------------GTCCTGGGG--ACAG--GCATGTGTCCGGCAGCA-----GGCCGGCCCTGTCCAAGCTGCAGGAGGTCCCGGGCAGT--GCCA-------------TCCAGGCTGCAGGAAATGGCAGGGAAGCAGCCGTCC----------TGCACCTGTCCGG-GG-CGGTCAGTCAGACGCCCCAAGCTGCCCCCTGTTCGCAGCTGTGCCGGCACCA----------CTGCAG--CAGCTCCTGGGGCCTCCCCAGGCCGGCGGACCGGACATG-TG---GGCAGGCGCCGGGTCAGCGAGGGGAACCACCCGCAGGAC-CTGCACCCCACGTCCCACACTG-----CCCCGCGATTCCCCAGACTTA------------GTGGGGTGCACGGGCCCTGCCTTTTGGGCAGCAGCTCTGGTTACCCACTGCGCA---GCCTGTGGTCCCCAGCCACCCCGGTGTTAGCAGTTATGAAAATGCA-TCCTCAGCTGAGCG-GCGGCCTTTATTGTCTGTAATTAGTTTCTCTCTTTGCGGAACCGCTGCTGGGCCGGGGGAG-GA---AGGCGGTGTCAGCAGGTCCTGGATCCGGGTGGG------------GACGGGCGAGCAAACTC-CACCTCACTCAGGCCTCACTGTC-TTGCTGCCACCTGGGAAGAGGGTTCCACGAGCTTGA-ACCAGGCCCTGTGCCCCAACACAC--ACACACACACACACACACAGACACACACACACACAGACACACACACACACAGA--CATACACACACACACAGACA----CACACACA--CAGA--CACACA--------CACACACAGACACACACAGACATACACACACACACAGACACACAG--ACACACACACACACACAGACACACAGACACACAGACACACACACACACACACACACACACACACAGCCAACCGCTCCAGAGGCTCGGCGCCCGGCTGCCC------------------CCTTCTGGG------------------------------------------------------------------------------- 9 Dipodomys_ordii-NW_012267222.1-170926_171296 87.0% 41.2% -----------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGACGTTTGACGAGGCCGACAAGAACGGGGACGGCAGCCTGAGCATCGGCGAGGTCCTGCAGCTGCTGCACAAACTCAACGTGAACCTGCCCCGCCAGAGGGTGAAGCAGATGTTCAGGGTGAGTCTCCAGGGCACCACCCAGGATCGCTGTGGGCTGCTAGGTTACCCTGGCCCTGCGGGGCCCTGCAGGGCTCCCAAGAGGGGCTGGCAGGGCCTGGCA-----GG-----------------------------------------------------GGAGAGGCGGCTTGACC--------CTGGCCTGT-GTG-GGCCAGGCAGCTGC------GAGCTCGGTGCCAGAGCTTAGCTCTGCCAGAAACCGCTCTGCTAGCTCCAAGGAAGGGGCTGA-GCGCT---GGGCACAGCCCCGTGCAGT-------GG-GGCAGGCTGGGCCCTTGGAATAGGCCCCCAAGGCCCACAGCCGTACCCC--------------------CTTCCTGGTATCGCAGGACCCCCATCT-CAGGCCCATCAGGAGCCT--TCCAGGTGGGC-AGAAGTTCTCCTCAGCCCCCCATGCTCCTGGGGCCCCCAACCACCCTGGTGTTAGAAGTTATGAAAATGCATCCTTCAGCTGAGCA-GCAGCCTTTATTGTCTGTAATTAGTTCTCTTTCTGGAACCTCTGCGGGGGAGAGAAACTCTG----------CCGTCAGCAGGTCCTGGTTTGGGGCAGG-----------GATGGGCTGAGCCAGCAAACCAAGTCCCACAGCCTTGCGCC--TTGCTACAGCCTGGGAAAGAGGCTATATAAGCTTGGGCTCCAGATTCCCCAACACATATGCACAGGAGCACATATGTCTGCATACACGTGGACATGTGTGCGCACGCGCGCGCACACACACGCGCACACGTGCACACA----CGTGCACACACACGCACACACGCACA--------C--GCATGCGTACACACACGCACACACGCGCGCGCGCACACACACGCACACACACGCACACACACACATGTGTACATACACA---CACACA----CGCAC---------GCACACGCGCACACACACATG---CACACACATGCACA---------CGCGCACAC--------ACATGCACAC--GCATGCGTACGCAC-------------------------------------------------- 10 Peromyscus_leucopus-NC_051064.1-174210_174556 80.8% 38.1% -------------------------------------------------------------------------------------------------------------------GCCCATGGACTGTGTTGGCCCCTAACTCAGCCCCAAAGTGGCTGAAGCAGACGTTTGATGAGGCTGACAAGAATGGAGATGGCAGCCTGAGCATCGGTGAGGTTATGCAGCTGCTACATAAACTCAACGTGAATCTGCCCCGGCAGAGGGTGAAACAGATGTTCAGGGTGAGTGCTCAGTGTGACGGCTTGAGGC-----CA-------CTGCGGGAACACCTTCTG-GGGCTAGATGGGAAGCTGGGAGTGCCTAGCCAGGCCTGAGCTGTGGGAAGTCCCTACAGAG--CAA--TG---------------------------------------------------------GATGCCTC-ACA-GGGTAGGTAGTCAGGGACTTCA-GGTGTCACCTCCTGGCATCTGTGCCTGGTGCTGCTCTGCTGATTGTGGGGCATAGGCTAT-ATC------------------------------------TAGGTAGTGCACTTAGATTAGGCACTCAAGTGCAGCCACACCCCATTTGTTGGCCTC--------TTAAGATCCCCAGCCTCAA-AGACATACA-TGGTCTAGCAAAGAGCTG--GACTGGCAAGCCCAG-CTCTCAGTAGCCACCCCACTCTGCCTTGACCCCCAACCACCCTGGTGTTAGGAGTTATGAAAATGCATCCTTCAGCCAAGCA--CAGCCTTTATTGTCTGTAATTAGTTCTGTCTTTTGGGAACCTCCATGGGAGAGAAACTCTT----------GCGTTAGCAGGTCCTGGTTTGGGGCAGG-----------AATGGGCTGAGCCAGCAGACCCAGATCTTTGGCCTTGTTTTCCTTGCTGCAGCCTGGAAAGGGGTTTCTGTGGGCATGGATGCCGGGCCTGTCCCTAACACACA-C------ACACACACGCACGCACGCACGCACACACAC--------------------------------------------------------------------------------------------ACACACACACACACACACACACACACACACACACACACGCTCTTGGCCTGACAGCTCTGCCGTGTCT---GGCCCTCAAAGCTTC---------CTGTGTGTGCACTCAGGCTAGACAGGCAGTCATGCTCA---------GCTGCAGCAATGACAGCTGCAGGCTGGGTCTCTGTGTGAATGATAGGCAGTGAGCAGGACA----CTCTCAGACTGCCCACTG---------- 11 Castor_canadensis-NW_017871110.1-168594_169300 91.3% 43.7% ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTCCTGCAGCTGCTGCACAAACTCAACGTGAACCTGCCCCGACAGAGAGTAAAGCAGATGTTCAGGGTAAGTCCTGAGTGCACGGCTCGGGCCCCTCCCCTGGGGTC-CATCCAGGGCTACGGTAG-GCTGCAGGCGTGTGGATGCTAGTGGCCAGCCCTGCTGGGGGTATCAGGGGGCCCCAGGTGGGGACATTGGATCTGCACAGGGTGGTCTGCAACACA--TGAAGGGAGGCAGCTTGGCC--------AGGACCTAT-GCA-GGGTGGGTAGCCAGAGAC----------CCAGGGTTGGCAACTGTGCCAGGAGGTGCTCTGCCAATTCTAGGGAAGAGGGCTGAGCATG---GGGCATACACTCTGTCCA-----------GTTAGGGAG--ACTATGCTCTCAGCACTGAAACATAGCCATATTCCTCTTCTCAGCCCC--------TCATGAGCCCTAGTCTAGAGAGGGTGTCT-TGGCCCAGGCAGGATTCT--TACTAGTGGGCAGCAGCTGTCCTTAGCCACCCCATGCTGCTGGGATCCCCAACCACCCTGGTGTTAGAAGTTATGAAAATGCATCCTTCAGCTGAGCA-GTGGCCTCTATTGTCTGTAATTAGTTCTCTTTCTGGAACTTCTGCGGGGGAGAGAAACTCTG----------CCGTCAGCGGGTCCTGGTTTGGGGCAGG-----------AATGGGCTGAGACAGCAAACCTGGCCCTTGAGATTTGTGCC--TTGCTGCAGCCTGCAAAGGAAGTTCTGTGAGCTTGGGCACCAGACCGGCCCCGACACACAT-G-------CACACAGGCACGTACACATGTATATACACACAGGCT----CTTGGC------GTGACAGCTCCTGACAGCT-CCTGCCT---GTGCTCTCATGCTAGA----CAGGTGGTCATGCA----CTGCTGGAGCAATGACAGCAGCTAGCTTAAGGCCTGTACTGTGTGTGCGTGAGAGGGGCATTGAGCAC---GAGGCTCTCAGATTG---------CCTGCTGAGGACTATG-------GGGCACTC--------------------------------------ACGGGGCCTTCCTGCGGGCACTGGGGAGTGGGGCC-----------TGAGTCTACCTGGG----------- 12 Dipodomys_spectabilis-NW_024870976.1-168281_168688 86.2% 40.4% -------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGCAGACGTTTGATGAGGCCGACAAGAACGGGGACGGCAGCCTGAGCATCGGCGAGGTCCTGCAGCTGCTGCACAAACTCAACGTGAACCTGCCCCGCCAGAGGGTGAAGCAGATGTTCAGGGTGAGTCTCCAGGGCACCACCCAGGATCGCTGTGGGCTGCTAGGTTACCCTGGCCCTGCGGGGCCCTGCAGGGCTCCCGAGAGGGGCTGGCAGGGCCTGGCA-----GGGTGTCCGCCCCA--------------------------------------CCGGGAGAGGCGGCTTGACC--------CTGGCCTGT-GTG-GGCCGGGCAGCTGC------GAGCTCGGTGCCAGAGCTTAGCTCTGCCAGGAACTGCTCTGCTGGCTCCAAGGAAGGGGCTGA-GCGCT---GGGCACAGCCTCGTGCAGT-------GG-GGCAGGCTAGGCCCTTGGAATAGGCCCCCAAGGCCCACAGCCGTACCCC--------------------CTTCCTGGTATCGCAGGACCCCCATCT-CAGGCCCATCAGGAGCCT--TCCAGGTGGGC-AGAATTTCTCCTCAGCCCCCCCTGCTACTGGGGCCCCCAACCACTCTGGTGTTAGAAGTTATGAAAATGCATCCCTCAGCTGAGCA-GCAGCCTTTATTGTCTGTAATTAGTTCTCTTTCTGGAACCTCTGCGGGGGAGAGAAACTCTG----------CCGTCAGCAGGTCCTGGTTTGGGGCAGG-----------GATGGGCTGAGCCAGCAAACCTAGTCCCACAGCCTTGCGCC---TGCTACAGCCTGGGAAAGAGGCTATATAAGCTTGGGCTCCAGATTCCCCAACACGTATGTACATGAGCACATATGTCTGCATGCACGTGGACATGTGTGCGCGCGTGCACGTGCGCGCGCACACACACACACACACA----CACACACACAGAGCTCTTGGCCTGAC--------AGCTCTGCCGTGTCCAGCCCCTGACAAGCAGTCATGCCCGGCT--GGAGCCACAGC-TGCCTGCTCCGAGTCTGCGCACACG---GGCACC----AGAGG---------GGCAGTGAGCTCTCAGACTG----CCCGCTGAGGACAG---------CGGGGACTG-------------CCCCC--CC-------------------------------------------------------------- 13 Equus_asinus-NC_052181.1-184372_184696 80.5% 34.0% -----------------------------------------------------------------------------------------------------------------CTCTGCTGGACCCACGTTGGCCCCTAACTCGACCCCAAAGTGGCTGAAGCAGACTTTCGCCGAGGCGGACAAGAACGGCGACGGCAGTCTGAGCCTGGGCGAGGTCCTGCAGCTGCTGCACAAGCTGAACGTGAGCCTGCCTCGGCACAGGGTGAAGCAGATGTTCAAGGTGAGGGTCGGGGCACGAGCCGGCAGGGACGGCACCCCTGGGCCTGTGCACGGG--GTCT--GCCAGATGCCTCCAGGT-----GC-TGCCTCT------------------TTGCAGCTGT--GCCG-------------ATATCACTGCAGTAGCTCCCGGGGCCT--------------------------CTCCAG-GC-AGGTGGACTGGGCATTTGAGGTGGGTGCCAGGTGAGAGA-----GGGCACCA----------CCCAAA--GGGGGCTTCCCCCTTTCCCACTC-------------------------------------TTCCCCATGACTCCCCAGCCTTAA-TGGGGCCCTCTGGCCC----T------GGTGGGGTCCCTGGTAAGGTC------------CCGGGCACCGGCATACCCGTCTTTTGGGCAGCATCTCTGATTACCTACCCTGTGCGGCCTCTGGGCGGCCAGCCACCCTGGTGTTACAATTTATGAAAATGCATCCTTCAGCTGAGTG-GTGGCCTTTATTGTCTGTAATTAGTTTTTCTCTTTCCAGAACCCCTGCTGGGCAGGGGAGAGGA---ACATGGTGTCAGCAGGTCCTGATTTGGGGCGGG------------GAGGGGTGAGCAGGCAAACCTGGCCCTTGGGCCTCATGGTC-TTGCTGCAGCATGCAAAGAGGGTTCTGTGAGCTTGA-ACCAGGCTCCACACCCCAACACAC--ACATGCACACACACACACACACACAGGTGACCGCTCCACCAGGCATGGCCCC--------GGGCAGCTCCCGCCT----GTGTT-------------------------------------------------------------------TCA--TGATAGACGGGTGGTCGT-------GCTCGGCTGGAGCGAGTGGAACCAGCTGGCTCAGAGTGCTTGGGTCTGTGTGTGA-----------ATGAGGGGGCCAGCAGGATGCTCCCAGACTGCTGGCTGAGGACT--GGGGGCCTCACAGGGCCCCTCCTGCAGGCCCCGGCGGGGCTGGGCCTGCCTGGG--------------- 14 Ceratotherium_simum-NW_004454172.1-183036_183290 82.0% 34.2% -------------------------------------------------------------------------------------------------------------------------------------------ACTTGACCCCAAAGTGGCTGAAGCAGACGTTCGCCGAGGCCGACAAGAACGGCGACGGCAGCCTGAGCCTCGGTGAGGTCCTGCAGCTGCTGCACAAACTGAACGTGAACCTGCCCCGGCACCGGGTGAAGCAGATGTTCAAGGTGAGAGTCCCCGCTGGGGCTCGAGCCCCGCAGGCGCGGCACCCCTAGGCCCGT--GGGG------------GGCGGTT-----GGGCGGATGCC-TCCAGCTGCTCCCTCTTTCCAGCCGT--GCCA-------------GCAC-CACGCAGCAGCTCCCGGGGCCTCCC--------------------------CAG-GC-AGGCGGATGGAGCATTTGGGGCGGACACCGGGTTAGTGA-----GGGAACCA----------CCCAAAGGAGGCTGCACCCCCTTTTCCACCCTTCCCCACGGCTCT-----------------CCAGC-CTTAATGGGGCGCACCGGCCCTGG-CGGGGTCCCTGGTGGGG------------TCCCGGGCGCACACATGCC------------CGTCTTGCCCAGAGGGTGCATGAGAGGCCCAGAGTCCTGATTACCTGCCCTACGTGGCCTCCGGGCCCCCCGTAACCCTGGTATTAGAAGTTATGAAAATGCTCGCTTCAGCGAAGCG-GCGGCCTTTATTGTCTGTAATTAGTTTTTCTCTTTCCGGAACCCCTGCTTGGCCGGGGGGAGGA---ACACGGCGTCAGCAGGTCCTGATACAG-GTGGG------------GATGGGTGAGTGGGCAAACCTGGCCCTTGGGCCTCGTTGTC-TTGCTGCAGCCAGGAAAGGGGGTTCTCTGAGCTTGA-GCCAGGCCTGCACCCCGAC-ACGC--ACGCACACACACGCAGGTGACCACTC----------CACCAGGCACGGCCCC--------TGGCGGCTCCCGACT----GTGTTTCA--TGA---TAGACA--------GGGTTGTGCCCGG-----------------------------------------------------------------CTGGAGCGCAGGGAGCCAGCTGGCTCAGAGCGTGTGGGTCTGTACATGAA----------TGAGGGGAGCTAGCAGGATGCTCTCAGACTGCTGGCCGAGGACTA-GGGGAGCTCACAGGGCCCTTCCTGAAGGCCCTGGCAGGGCAGAGCCTGCCTGGGCAGTGGGGAC----- 15 Propithecus_coquereli-NW_012152752.1-174536_174877 73.7% 31.9% GGGCCCACGGCGGTCCCCGTGGGGTCGCACGTTCCGGCGCGTGGGCCGGG--GTCCCCCACTCCTTCCTCCCCAGG----------------CTGGGGGTGGGGCGCGTGCTGGGCCT-GTGGACCCACGATGGCCCCTAACTCAGCCCAAAGTGGCTGAAGCAGACCTTCGACGAGGCGGACAAGAACGGGGACGGCAGCCTGAGCATCGGCGAGGTCCTGCAGCTGCTGCACAAGCTCAACGTGAACCTGCCCCGGCAGCGGGTGAAGCAGATGTTCAGGGTGAGGCCGCGGCAGATACGGGGCAGCTGACTGCACCCTGGGCCCGTGGGGCGGGCGG----------TGGGC-----------CGGCTGCCA--------------------------CT--------------------CGCAGGAAGGGGCC-G-------A----------GCACCGCCTGGGCCGGCATTCGGGGCGGGCGCCGAGTGAAGCCGC----------------------------------------------------------------------------------------------------------------------------------------------------------ACCCCT--------CCCTGGCCCCCCAGTCTTAATGGGGACACACTGGCCCGGGCGGGGCCCTGTCTG---TCAGGCAGCAGCTCTGCTTGCTGCCCCACGCGCCTCCTGCCCACAGCAACCCTGGTGTTAGAAGTTATGAAAATGCATCGTTCAGCGGAGCC-GCGGCCTTTATTGTCTGTAATTAGTTTCTCTTTCCGGAAGCCCCGCGGTGCGGCGAGAGGAGC----TCCGCCTGTTCGCAGGTCCTGCCGGGCGGTGGG------------GAGGGCTGAGCCGGCAGACCCAGCCCTCAGGCCTCGACCCT-TGGCACAGGCTG-CAAAGAGGGTCCCGCGAGCTCAGCCAGCCCCTGCACGCCCCGATCCAC--ATGCACACACACACTCCGCA---------------AGGCCGGCCCTGCGCCCT--CGCAGTGGGTGGTCGCGCCT----GGCTGG----------GGCGAG--------GGCAGCACGTGGCGTGTGCGGAGTGAGGGGAC---GGTGCTCTCAGGGGCTTGCTGAGTGCCGCA-------GAGTCTCGCAGG-----CCCTCTTGAAGGCCCCGGGGGGGACAGGGTCTGCTGGGCAG--------TGGGGGCTG--------------GCGGGCGGCTGGCATCGGCAC----------CCTGGCACCCCTGCCTGCCCAGGCTGAGCCACACTCCC----------------------- 16 Arvicola_amphibius-NC_052052.2-172755_173128 84.6% 43.0% --------------------------------------------------------------------------------------------------------------------------------------------------CCCAAAGTGGCTGAAGCAGACGTTTGACGAGGCTGACAAGAATGGGGATGGCAGCCTGAGCATCGGTGAGGTTCTGCAGCTGCTCCACAAACTCAACGTGAACCTGCCCCGGCAGAGGGTGAAACAGATGTTCAGGGTGAGTGCCAAGTGTCCAGGCTGCTGTGGGAGCAT-------TTTCTGGGGTGACTGCAG-GCTGCAGATGGGAAGCTGGGAGTGGCCAGCCAGGCCTGAGCTGTGGGAGGCTCCTACAGAG--CCA--TG---------------------------------------------------------GATGCCAT-CCA-GGGTGGGCAGTCGGGGACTTGAGGGTGTCACCTCCTGACATCTGTGCCCGGTACTGCTCTGCTGACTGTGGGCAGGGCACTGA-GCACT---GTGCATAGGCTATTCCTA-----------GGGAGACCACGCGCTTAGAGGAGGCACCCAAATGCAGCCACACTCCGTTTGTTGGTCTC--------CTATGGTCCCTAGCCTTAA-AGACCTGCA-TGGTCCAGCAAAGAGCTG--ACCTGGTAAGC--------------------------AGCAGCTCTTGGTAACCACCCTGATGTTAGGAGTTATGAAAATGCATCCTTCAGCCACGCA--CAGCCTTTATTGTCTGTAATTAGTTCTGTCTTTTGGGAACCTCCGTGGGAGAGAAACTCTT----------ACACTGGCAAGTCCTGGTTTGGGGCAGG-----------AATGGGCTGAGCCAGCAAACCCAGATCTTTGACCTTGTTTTC-TTGCTGTAGCCTGGAAAGGGGTTTCTGTGGGCATGGATGCCAGACCTGTCCCTAATGTGCA-C------ACATGTACGGACACACACGCACACACGCATGCACACAAACATGTGTGCACACACGTACGTGCGCGCACACATGCGTGCATACACACGTATGCACACACACATACGCACACACATATGCGTACACACACACACACACACACACACACACACATACACACACGCTCTTGACCTGACAGCTCTGCTGTGTCT---GGCCCTCAAAGGTTC---------CTGTGTGTGCACTCATGCTAGACGGGTGGCCATGCTCA---------GCTGCAGCAATGACAGC---------------------------------------------------------------------------- 17 Ovis_aries-NC_056065.1-174842_175311 84.7% 39.7% -------------------------------------------------------------------------------------------------------------------------------------TCCCTAACTTGGCCCCAAAGTGGCTGAAGCAGACATTTGACGAAGCCGACAAGAATGGGGATGGCAGCCTGAGCATTGGCGAGGTTCTGCAGCTGCTGCACAAGCTGAACGTGAACCTGCCCAGGCAGAGGGTGAAGCAGATGTTCAAGGTAAGCCCAGACCCAGGTGTGTGTTGGGAGCAGCC----------------------------------------------------CCACCCTGTCCGAGCTGCAGAGGGTGCTGGGCAGT--GCCG-------------TCTGAGCTGAAGCAAATAGCAAGGCAGCAGCTGGTC----------TAGACCTTTGCGG-GGGCGGTCAGTCAGATACCCCAAGTTGCCTCTGGCTGTGCC--------GGTTCC----------CTGCAG--CAGCTCCCAGGGCCTCCCCTGGCCGATGGACTGGGCACA-TG---GCAGG-TGCCTGGCCGGAAAAGGAAACCACTCACAGGGC-CT-GTACCCTCATCCCACCCTA-----CCCCACGACTCCCCAGCCCCG------------ATGGGGGGCAGAAGCCCTGCCTTGCAGGCAGCAGCACTGGTCACCCACTGCCTC-----CCCTGTGGTCCGCTGCCACTGATGTTAGCAGTTATGAAAATGCA-TCCTCAGCTGAGCG-GCTGCCTTTATTGTCTGTAATGAGTTTCTTTCTTTCCGGAACCCCTGCTGGGATTGGGGAGGAAGGCGGGTGGTGTCAGCGGGTCCTGGTTCTGGGTGGG------------GCTGGGCCAGCAAAGCCTGCCCTCATTCAGGACTCGCTGTC-TCACTGCTGCTG-GGGAAAGGGTTCTGTGAGCTTGA-ATGAGGCGCCATGCCCCAGCACAC--ATGCACACATGCACACGCACACACACAAACATACAGAGAGAGACACACACATG--TGCGTACACATGCATGTACA----CATGCACA--CAGA--GAGACA--------CATGTGCACGCACAAACACACATGCACGCACACAGCCAGCTGCCC--CTCCAGGCGCAAGCCCTGGCAGCTCCCTCC------------TGGGCTCCTGTGATGGGCAGGAGGTCATGCT------------------CGGCTGGAGTGAGGGGA-----GCTGGCCAGCTCAGAGTGTGT-------GGGTCTG---------------------------------------------------------- 18 Tursiops_truncatus-NC_047034.1-175197_175549 75.1% 33.6% --------------------------GGAACTTGGGCGGG------------GTCCTCCACGCCTTCCTGCCCCGGGAGGGGAGGGGAGGGGAGGGGAGGGAGGCGCAGCTGGCCTTGCTGCACCTCCGTTGGCCCCTAACTTGGCCCCAAAGTGGCTGAAGCAGACGTTTGACGAGGCCGACAAGAACGGCGACGGCAGCCTGAGCATCGGGGAGGTCCTGCAGCTGCTGCACAAGCTGAACGTGAACCTGCCGCGGCAGAGGGTGAAGCAGATGTTCAAGGTGAGGCCGC-GGGGCCGCCAGG----------------------GTCCTGGGG--ACAG--GCGTGTGTCCGGCAGCA-----GGCCGGCCC-----------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCAAG----------CTGCAG--GAGGTCCCGGGGCCTCCCCAGGCCGGCGGGCCGGACACG-CG---GGCAGGCGCCGGGTCAGCGAGGGGAAGCACCCGCAGGAC-CCGCACCCCACGCCCCACACTG-----CCCCGCGATTCCCCAGACTTA------------GTGGGGTGCACGGGCCCGGCCTTTTGGGCAGCAGCTCTGGTTACCCACCGCGCA---GCCTGTGGTCCCCAGCCACCCCGGTGTTAGCAGTTATGAAAATGCA-TCCTCAGCTGAGCG-GCGGCCTTTATTGTCTGTAATTAGTTTCTCTCTTTGTGGAACCGCTGCTGGGCCGGGGGAG-GA---AGGCGGTGTCCGCAGGTCCTGGATCCGGGTGGG------------GACGGGCGAGCAAACTC-CACCTCACTCAGGCCTCACTGTC-TTGCTGCCACCTGGGAAGAGGGTTCCATGAGCTTGA-ACCAGGCCCTGTGCCCCAACAAAC--ACACACACACACACACACACACACACACACACAGACACACACACACACACACA--CACACACACAGAGC--------------------CAAC--TGCTCC--------AGAGGCTCGGCGCCCGGC----T---GCCCCCTTCTGGGCTCTCG--TGAGGGACGGGAGGTTGTG--CTTGGCTGG-----AGCTAGGGGAGCTGGCCGGCCCGGAGCGCGTGGATCCGTGCGTGAATGGCGGGGGCAGGGTGGTGTGAGCAGAGTGCTCTCGGACTGCTGGGTGAGTACT--GGGGG---------------------------------------------------------------- 19 Microtus_ochrogaster-NW_004949136.1-173232_173581 73.9% 32.3% ---CCATTGTCCAGCTGGGTGGGAAGGGAAGATCAGAAGGGGTGCTTGGG---CTGGGGACTCTTGCCG--------------CCTAAGCTGGAGGGCCGAACAAGTAAGGCCAGGCCCGTGGACTGTGTTGGCCCCTAACTCAACCCCAAAGTGGCTGAAGCAGACGTTTGACGAGGCTGACAAGAATGGGGACGGCAGCCTGAGCATCGGTGAGGTTCTGCAGCTGCTCCACAAACTCAACGTGAACCTGCCCCGGCAGAGGGTGAAACAGATGTTCAGGGTGAGTGCCGAGTGTCCAGGCTTGAGGCCGCTGTG-------GGAGGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCCCAGGGTGGGCGGTCTGTGCCCAGTGCTGCTCTGCTGACTGTGGGCAGGGCACTGA-GCACT---GTGCATAGGCTGTAGCTA-----------GGGAGACCACTTGCTTAGGGGAGGCACCCAAATGCAGCCACACTCCATTTGTTGGTCTC--------CTATGGTCCCCAGCCTTAA-AGACACA---TGGTCCAGCAAAGAGCTG--AACTGGTAAGC--------------------------AGCAGCTCTCGGTAACCACCCTGATGTTAGGAGTTATGAAAATGAATCTTTAAGCCATGCA--CAGCCTTTATTGTCTGTAATTAGTTCTGTCTTTTGGGAACCTCCATGGGAGAGAAATTCTT----------ACGTTGGCAAGTCCTGGTTTGGGGCAGG-----------AATGGGCTGAGCCAGCAAACTCAGATCTTTGACCTTGTTTTC-TTGCTGCAGCCTGGAAAGGGGTTTCTGTGAGCATGGATGCCAGACCTGTCTCTAATGTGCA-C------ACATGTGTGGACACACACACGCATGCACACACATGCGCGCAC----------ACACACACATGCGCA------------------CACATGCACGCACACACACGCATGCACACACACGCGCGTACACACACACACACACACACACACCCATGCGCGCTTGCTCTTGACCTGACAGCTCCGCTGTGTCT---GGCCCTCAAAGATTC---------CTGCATGTGCACTCATGCTAGACGGGCGGTCATGCTCA---------GCTGCAGTAATGACAGCAACTATCGGGGTCTCT------------------------------------------------------------ 20 Nannospalax_galili-NW_008355419.1-167336_167684 82.6% 41.6% --------------------------------------------------------------------------------------------------------------------------------------------------CCCAAAGTGGCTGAAGCAGACGTTTGATGAGGCCGACAAGAATGGGGATGGCAGCCTGAGCATCAGCGAGGTCCTGCAGCTGCTGCACAAACTCAACGTGAATCTGCCCCGGCAGCGGGTGAAACAGATGTTCAGGGTGAGTTCCGAGTATACCAGCTTGGGTCCCTGGCGGGGACACCTTCCAGGATGACTTCAA-GCTACAGATGAGGGGCTGAGATTGACCAGCCAGGCCCAAGCTGGAGGAAGTCCCGGCAGGG--CCA--CG---------------------------------------------------------GATGCTTC-ACA-AGGAAGG---CCAGGGACCTCAGGGTGCCACCTCTTGACTGCTGTGCCCGGGGCTGCTTTGCTGACTGTGGGGCAGGGAACTG-AGCGC---TGG----------GCTAA-----------TAGGTCCTGCCTAGGTAGCCCAGGAACCCAAATGCAGCCACACCCCATTTGTGGGTCCC--------TCATGATCCCCAGCCTTAA-AGAGGTGCA-TGGACCAGGCAGGAGCCT--GACTGGCGGGTGATA-GCTCTTATTACCCATCCACACTGCCTTGACCCCCAGCCACCCTGATGTTAGTAGTTATGAAAATGCATCCTTCAGCTGAGCA--TGGCCTTTATTGTCTGTAATTAGTTCTGTCTTTCGGGAACCCCTAAGGAGAAGAAACTCAA----------CTGTCAGCAGGTCCTGGTTTGGAACAGG-----------AATGGGCTGAGCCAGCAAGCCTGGCCCTTGGGCCTTATTACC-TTGCTGCAGCCTGGAAAGGGGTTTCTGTGAGTGTGGATGCCAGTCCTGCCCTTAACACATA-C------ATGTATGGGTGTGCATACACACACTTATGCACACGACA---------------CACACACATGCACACACACACGT----------------------------------------------------------ACGTGCACACTCATGCACTCACACAGGCTCTTG-----ACCTGACAGCTGTATCT---GGCCCTTAGAGGTTC---------CTACATGTCAACTCATGCTAGACAGGCAGTTATGCTCG---------GCTGGAGCAATGGGT--------------CTCTGTGTGAGTGATGGGCAGTGAGCAAGACG----TTCTCAGACCGTCCACCAAGGACCACGT 21 Lemur_catta-NC_059130.1-173538_173856 78.1% 33.8% ------------------------------------------CCCCCCGG--GCCCCCCACTGCTTCCTCCCCAGG----------------------CCGAGGGCGGGGTGGGGCCT-GTGGACCCACGATGGCCCCTAACTCGGCCCAAAGTGGCTGAAGCAGACCTTCGACGAGGCGGACAAGAACGGGGACGGCAGCCTGAGCATCGGCGAGGTCCTGCAGCTGCTGCACAAGCTCAACGTGAACCTGCCCCGGCAGCGGGTGAAGCAGATGTTCAGGGTGAGCCCTGCGCCGCCCGCTCCGTGCCAGGGTCCACGCTGTGCCGGGGTCCCCGCCGCG--CCGCACCGGGT-----------GGTCTGCCGTAGACACAGGGCAGCTTG------ACCT--------------------TGTGTCCTGGGCCT-GTGGGCCACGCTGCGACTTGTGGGGAGGGGCCAGGCATTTGGGG-GAGGCGCAAGTGAAGCTGC-----------------------------------------------------------------------------------------------------------------------------------------------ACCCCCTCCCCGGCCCC--------CCACAGCCCCACAGTCTTGGGGGGGACGCCCTGGCCGGGGTGGGGCCCTGT-CT---GTCGGCAGCAGCTCTCCTTGCTGCCCCCCACCCCTGCCGCCCACAGCCGCCCTGGTGTTAGAAGTTGTGAAAATGCATCGTTCAGGGGAGCG-GAGGCCCTTATTGTCTGTAATTAGTTTCTCTTTCCGGAAGCCCGGCGGGGCGGTGAGAGGAGC----CCCGCCTGCTTGCAGGTCCTGCTTGGC---GGC------------GAGGGCTGAGCGGGCAGACCCAGCCCTCAGGCCTCCACCCT-TGGCACAGGCTG-CAAAGAGGGTCCCGCGAGCTCAGCCGGCCCCTGCACGCGCCAACCCAC--ACGTGCACACACACGCTCTCGCCTGACGGCTCCGGTGGCCGGCCCTGAACCCG--CGCGGTGGGTGGTCGTGCCT----GGCTGG----------AGCCAG--------GGCAGCACTGGGCGTGTGCGGAGTGAGGGGAG---GGGACTCTCGGGGTCTC----------------------------CCAG-----GCCCTTTGAAGGCCCCGGTGGGGGCAGGGTCTACTGGGCAG--------TGGGGGCTG--------------GCGGGTGGCTGGCACCTGCAC----------ATCAGCACCCCTGCCTGCCCGGGCTGAGCCGTCCCCCCTTCC------------------- 22 Hipposideros_armiger-NW_017731634.1-171048_171637 91.1% 43.8% -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGCTGCAGCTGCTGCACAAGCTGAACGTGAACTTGCCTCGGCAGAGGGTGAAACAGATGTTCAAGGTGAGGCAGGGGGCGGGGTCCGGCCGGGGCTCTGGCCAGAGGGACAGCACCCCGAGAGAG--GGCTCCATGGGCCAGGG------GGTGGAGTGTCCTGGGCCGCAGGAGGTCCCCAGCAAT--GCCA-------------TTTGAGCTGCAGCAGATGGCAGGGGTCGCAGCGTGGCCAGCCGCCCTGGACCTGGGAGG-GC-TGCTCGGTCG-GATGCCACAGTTGCTGCCTCTTGGCAGCTGGGCCGGGCTCC----------CTGCAG--CAGCTCCTGGGGCCCC--CGTGCTGGTGGACTGGGCACTGGG---GGCAGACGTTGGGTCAGTGAGGAAAACTGCCCGAAGGAGGCTGCACCCCATTTCCCACCCCC-----ATAACTGCCCTGCCTTAATGG------------GGCACACCCGCCCTGGCCCTCTCACGGGCAGCAGCTCTTTTCACCCGCCCGGCGCAGCCTGTCTATCCCCAACCACCCTGGTGGTAGGAGTTATGAAAATGCATCCTTCAGCTGAGCG-GAGGCCTTTATTGTCTGTAATTAGTTTATCTCTTCTCAGAACCCCTGCTGGGGCAGGAGCACGA---ACACCAGCTCAGCAGGTTCTAGCTCAGGAGGGGCTAGGGGAGTGGGGGCTGGCAGGGGGCAGCCCCAGCCCTTAGGACTCATGGTC-TTGCTGCAGCCTGAAAAGAGGGTTCCAAGAGCCTGA-ACCAGTCCCTCCGCCCCGAAACGC--ACAGGCACACACATGCACCCACACGTACTCACACAGCCTGACAGCTCTGCCAG--GCGGGGCCCTTA------GT----GGTTCT--------------------------------------------------------GCCGGGGCTCTCA--GGACAGACAGGCGGTC-------GCGCTTGGCTGGAGCAAGGAGAGCTGACTGGCTCAGAGCACGTGGATCTGTGTGTAAATGGGGAG---------AGGTGAGCTGGCTGCTCTCAGACGGCTGGTGAG-AACT--GGGGGGCTCAGGGGGCCCCTCCTGAAGGCCCTGGAGGGAACA--------------------------- 23 Neophocaena_asiaeorientalis-NW_020174791.1-185797_186068 85.7% 40.8% ---------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCAGACGTTTGACGAGGCCGACAAGAACGGCGACGGCAGCCTGAGCCTCGGGGAGGTCCTGCAGCTGCTGCACAAGCTCAACGTGAACCTGCCACGGCAGAGGGTGAAGCAGATGTTCAAGGTGAGGCCGGCGGGGCCGCCAGGGCTCTCGGGCCCCGAGCGAGGGCTCCTGGGG--ACAG--GCGTGTGTCCGGCAGCA-----GGCCGGCCCTGTCCAAGCCGCAGGAGGTCCTGGGCGGT--GCCG-------------TCCAAGCTGCAGGAAATGGCAGGGAAGCAGCCGTCC----------TGCACCTGTGCGG-GG-CGGTCAGTCAGACGCCCTAAGCTGCCCCCTGTTTGCAGCTGTGCCGGCACCA----------CTGCAG--CAGCTCCTGGGGCCTCCCCGGACCGGTGGACCGGACACG-TG---GGCAGGCGCCGGGTCAGCGAGGGGAACCGCCCGCAGGAC-CTGCACC----------------------CCGCGATTCCCCAGACTTA------------GTGGGGTGCATGGGCCCTGCCTTTTGGGCAGCAGCTCTGGCTACCCACCGC-----------------CCAGCCACCCCGGTGTTAGCAGTTATGACAATGCA-TCCTCAGCTGAGCG-GCAGCCTTTATTGTCTGTAATCAGTTTCTCTCTTTGCGGAACCGCTGCTGGGCCGGGGGAG-GA---AGGCGGTGTCAGCGGGTCCTGGATCCGGGTGGG------------GACGGGCGAGCAAACTC-CACTTCACTCAGGCCTCACTGTC-TTGCTGCCACCTGGGAAGAGGGTTCCGCGAGCTTGA-ACCGGGCCCTGCGCCCCAACACAC--ACACACACACACACACACACACACAGACAGAGCCAACCGCTCCACGAGGCTCA--GGCGCCCG---------------------------------------------------------------------GCTGCCCGCTTCTGGGCTCTCA--TGAGGGATGGGAGGTTGT-------GCTTGGCTGGAGCGAGGGGAGCTGGCCGGCCCGGAGCACATGGATCTGTGCGTGAATGGCGGGGGCGGGGTGGTGTGAGCAGAATGCTCTCGGACTGCTGGGTGAGTACT--GGGGGGCTCACAGGGCCCCTCCTGAAGGCCCCAGCGGGG------------------------------ 24 Jaculus_jaculus-NC_059106.1-169164_169599 92.7% 46.4% ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCTGCAGCTGCTGCACAAACTCAACGTGAACCTGCCCCGGCAGAGGGTGAAGCAGATGTTCAGGGTGAGTGCCAAGGGCTCTGGCTTGGGCTCCCGGGGGGAACACCTTTCAGGACTACTGCAG-ACTAAAGATGGATAGCTGGAAGTGGCCATCCTTGCCTGAGCTGAAAGAGTTTCTGGGGGTC--ATG--CCAGCTTTGCAGCTTGCTCTGTGGCCTGTGAAGGGGAAGACAACTTGCTA--------GGTCCTGAG-GAA-GGGTGTACAGCCAGGGACCCTAGGGTGCTACCTCTTGGCAGCTATGCCAGGTGCTACTCTACTGGTTCTGGAAAAGCAGATTGAGCACC---CGACATGGGTTCTGGATA-----------GGTGGAATAGGCACTTGGGGCAGGCACCCAAACCCAGCTGCACCCCATTCCCCAACCCC--------TCATGTATTCCAGTCTTAA-AGAGGTGCA-TGGGCTGGGCAGAAGCTT--GACTGGTGGGCAGCAGCTTTCATTTGCCACCCCATGCTGACTTGACCCCCAGTCACCCTGATATTAGATGTTATGAAAATGCATCCTTCAGCCAAGCA--TGGCCTCTATTGTCTGTAATTAGTTCTCTCTTTCTGGAGCCTCTGTGGGAGAGAAGCTGTG----------CCATCAGCAAGTCCTGCTTTGGACTGA----------------------GCCAGCAAACCTGGCCCTCGGGTCTTGTTTCC-TTATTGCAGCCCGGAAAGGTGTTTCTGTGAGCTCAGGCACCAGTGCTGACCCCAACGCATG-C------TTATATGGGTACACATACACACCCATGCCCCTGCGCACACACACGCAGAGGCTCTGG------GCCAGA--------------CAGCTCTTCCGTGTCT--GACCCCTGGTGGCCTGTGTGCTCATGCTAGACAGGAAGAGCAATGTGCCACTAGTGAGGGCTCTGTGAGTGAGCAGTAATGAGTAGAA---TGC-------TGTGA---------CTGCCTGTTCAGGAGCATGGGGCGG----------CCA---------CATTTCCTCCTGAATGCCCTTGTAGGATAGTCTGCCTGGGCAATGGGGACTGGC--------------------------------------- 25 Microcebus_murinus-NC_033661.1-171731_171991 75.6% 31.0% ----------------------------AGGTTGGGGCGCGTGGCCAGGCGGGGTCCCCCATCCGTCCTGCGCGGG------------------CCGCGGGCGGGCGGGCGCGGGGCC-TGTGGACCACGGTGGCCCCTAACTCGGCCCAAAGTGGCTGAAGCAGACCTTCGACGAGGCGGACAAGAACGGGGACGGCAGCCTGAGCATCGGCGAGGTCCTGCAGCTGCTGCACAAGCTCAACGTGAACCTGCCGCGGCAGCGCGTGAAGCAGATGTTCCGGGTGAGCCCCGCGCCACGCTGGGGTCCCCGCCGCGCCGCCCCGCCTGGTCCTGCCGCAGAC--AC----CCGGG-----------CAGCGGGACTACGCGCGA-----------------CT--------------------CGGGGGGAGGGGCTGAGCACGCGCAGTGGGCTGAGCATGCGTGTGGCCGGCATTTGGGGCAGGGGCCCAGAGAAGTGCA-----------------------------------------------------------------------------------------------------------------------------------------------CCCCCTTCCCCGGACCC--------CCACGGCCCCACAGTCCTAATGGGGACCCACCGGCCCGGGCGGGGCCCTGTCTG---TGGGGCAGCAGCTCTCTT-------------------TGCCCGCAGACACCCTGGTGTTAGAAGTTATGAAAATGCATCGTTCAGCGGAGCCCGCGGCCTTTATCGTCTGTAATTAGTTTCTCTTTCCCGGAGCCTCGCAAGGCGGCCAGAGGAGC----TCTGCCTGTGTGCGGGG----------------------------CCCGGCTGAGCCGGCAGACCCAGCCCTCGGGCCTTGACCCT-CGGCACAGGCTG-CAAAGAGGATCCGCGA-GCTTGGCCAGCCGCTGCGCGCCCAGACCCAC--ACGCGCACACGCTCACGCCCG---ACAGCTCCGCGCGGCCAGCCCTGCGCCCT--CGCAGTGGGTGGTCGCGCCT----GGCTGG----------GGCGAG--------GGCAGCACGTGGCTTGTGCGTGCGGAATGAGGGGAGGGGCTCTCAGGGACTCACCGGGCGCTGCA-------GGGTATCGCAAG-----CCCTCTTTTTTTTTTTGAGACAGAGTCTCACTTTGTTGCCT--------GGACTAAAG--------------TGCCGTGGCGTCAGCCTGGCT----------CACAGCAACCTCAAACTCCTAGGCTAAAGCGATCCTTCTGCCTC----------------- 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