Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%

                                                             cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .   ] 1484
 1 Target                                                 100.0% 100.0%    -------------TGGCCTTGGGGATCTGCAGTGACCTCGGGCTGTGGGGTAGGAGGGA--------TCC-AGGCCCC-CTGCCCGCCTGGCAGAGCTCCCTGGGACTCAGTGAGGACCGAGTAGCACTGT------------GCCCAGCCCTGTGCTGAGTGCTGGGCTGGAAGGAG----------------------------------------------------------------------------------------------------------------------------------------GGGCACAGC---ATAGTCCATCTAGCTGGGGAGGTC-------ACAGCTCCC-CATAAACAGAAACGACCCCCACAGAGGTATGCTGATGGATGGGTATGGGTGCAAACAGTGGCTCAGGCAGCCACTGGGCA----------TGGCTGCTGGAGGGAGCAGGGGCCACCCGAGATGGAGG-CTCTGTGCAGGGGGTGGGTGGGGAGAGTT-GAGGCACACAGGGAAC-GGGTAGGGTCCCACGGTTTGGGGAGAGACATG--GCAGTCCTCAAGGGCTG-----------GGATCAGGGCGCAG-CCAGGGTTTCTGATGGCTTTGCTGATGGTCAGGACCCAGGCATGC---CAGGCAAGGCCTCAGCCCAGCAGTTGCCAAGCGTGTAGCCACTTTGGGCCCGTGG---AGAGAGTCGCGCTGCGGAGCCCCCAGGGGGACCTGAGGTC-----------------------------------------------------------------------ACAAG-----------------------------AGCCTC----GATGCACCTGAGCGCGGAGCTGGGGGTCCCTGGAGCCGCTGTCCCCA--CCT----------------GCGGCGCT-GGAGCCCTGGAGGTGTCCAGGGGCTTCC--TTGGAACGTGGAGACGTGCTGGTTAAACGTGGAGCCCCGGGCCAGC----CGGGCACTGGGGGCTG-------CAGGTG-------------------GAGGGAGGTGGAT------GCTCTCCCTCGTG--G-G------GGCGTGTC-----------------------TTTTCCACAGGAAA--GGG---AAAGGGGGAGGG-ACACGGGTCAGCAGTGGGGGGCT---GTGCAGTCTCGCAGATC--TTCACCCTTGGTTCTTGAACTCTGGACCCTGAGCCCTGCCGAGGGTCCCGCAAAGGTGGGCAAGGAGCTCCCGGCTGCTTGGTCTCCGCAGTGTTGGGGCTG-----CCAGCAGGGG-GACGCTGG------GCCCCCGGGG-----------------------ACCTGACCCGTGCTCCCT----CCCCACCCCGCAGTCTCCATCGACTCCATCC--------------------------     
 2 Chlorocebus_sabaeus-NW_023666054.1-203737_204545        97.0%  78.6%    ----------------------AGAGTGAGTGGGAGCCCTGGCGGGGGGGCAGGTCAGA------GTCCC-CGGGGGGACACGAGGGTAGGGACCTTCCCAGGGCAGCCACTGATGGCTGAGGAGCAACGAGACCCTAAGCCTGGACACCTCTGGGCTCAGTGACCTTGGGGATCCGCAG------------------------------------------------------------------------------------------------------------------------------------TGACCTGTGCT---GAGTGCTGGGCTGGGAGGAGGGGC-------ACAGCTCCC-CATAAACAGAAACGAACCCCACAGGGGTATGCTGATG-------------------GGTGGCCCAGGCAGCCACTGGGCA----------GGGCCGCTGGAGGGAGCAGGGGCCACCGGAGATGGAGG-CTCTGTGCAGGGGGTGCACGGGCAGGGTT-GAGGCACACGGGGAATGGGGTGGGGTCCCACAGTTTGGGGAGAGACGTG--GCAGTCCTCAAAGGCTG-----------GGATAAGGGTGCGG-CCAGGGTCTCCGCGGGCTTTGCTGATGGGCAGGACCCAGGCATGC---CCGGCAAGGCCTCAGCCCAGCAATTGCCAAGCATGTAGCCACTTTGGGCCCCTGG---AGAGAGCCACGCTGTGGAGCCCCCAGGCGGTCCTGAGGTC-----------------------------------------------------------------------ATGAC-----------------------------AGCCTC----GATGCACCTGAGCACAGAGCTGGGGGTCCCTGGAGCCGCTGTCCCCA--CCT----------------GTGGCACT-GGAGCCTTGGAGGTGGCCCGGGTCTTCC--TTGGAACGTGGAGATGTGCTGGTTAAACGTGGAGCCCTGGGCCAGC----CGGGCACCCGGGGCTG-------CAGGTG-------------------GGGGGAGGTGGAT------GCTTTCCTTTGTA--GGG------GCTGTGTC-----------------------TTTTCCACAGGAAA--GGG---AAAGGGGGATGG-ACACGGGTCAGCAGTAGGGGGCT---GTGCAGTCTCGCAGATC--TTCACCCTTTGTTCTTGAACCCTGC--CCTGGGCCCTGCCGAGGGTCCCGCATAGGTGGGCAAGGAGCTCCCAGCTGCTTGGTCACTGCTGTGTTGGGGCTG-----CCAGCAGGGG-GACGCTGG------GCCCCAGCTG-----------------------GCCTGACCTGTGCTCCCT----CCCCACCTCGCAGTCTCCATCGACTCCATCCAGGAGGTGA-----------------     
 3 Cebus_imitator-NW_016107460.1-179890_180544             83.3%  49.1%    CCTCCCGCAAGAACGAGAAGGCCAAGAGTGAGTGAGACCCTGCTGTGGGTCAGGCTGGG------GTCCC-TGGGGGC-ACACGGGGTACGGAGCCTCTCAGAGCAGGCGCTGGTAGTTGAGGGGTGGTGAGACCATAGGCCTGGACAGCTCTGGCTCA-GTGGCCTTGGGGTTCGGC-ATGACCTCTGGGCCATAGGGT-GGGAGAGACACAGGACCCCTGCCTGCCTGGCTGAGCTCCCTGGAATT--CAGTGCGGACTGAGT----ATGGCCGTGCCCAGCCCTGT--GCTCCTCCTTGGGCTGGGAGGAGGGGCATAGC---ATAGTTCGTCTAGCTGGGGAGGTC-------ACAGCTCCG-CATAAACGGAAACGACCCCCAGATTGGGGAGAGACGTGACAGTCCTCAAGGGCTG------------------------------------------------------------------------------------------GGAGCA-----------GGGCGCAGCC--------------------------------------AGGGTCTCTGCTGGCTT------------------------------------------TGCTGATGGG---CAGGACCCAGGTGTCC---TGGGCGAGGCCTCAGCCCAGAGGTTGCCAAAGGTGTAGCCACCTTGGGCCCCTGG---AGGGAGCCGTGCCTCGGAGCCCC-CAGGGGACCTGAGGTC-----------------------------------------------------------------------ACGAG-----------------------------AGTCTC----GATGCACCTGAGCGCAGAGCTGGGGTCCCTGGAG--GCGCGGTCTCA--CTG----------------GCGGTGCT-GGAGCCCTGGAGGTGGCTAGGGGATTTC--TCGGAACGTGGGGACCTGCTGGCTAACCGTTCAGCTCTGGGCTTGT----TGGGCACTGGGGGCTG-------CAGGTG-------------------TTGGGGGGTGGCGGAT---GCTCTCCCTTGTG--GGTGGAGGGGCTCTGTC-----------------------TTTTCTGTAGGAGCAGGGCAAAAAGGGAGGGACT-TGGTCAGTGCGGGGGGGGGGGCT---GTGCATTCTCACGGATC--TTCACCCTTTGTTCTTGAGCCCTGGCCCCTGAGCCCTGTGGAGGGTCACACATAGGTGGGCGAGGAGCTCCCACCTGCTCAGTCACTGCTGCCTTGGGGCTG-----CCGGCAGAGG-TACGCTGG------GCCTCGGGCG-----------------------TCCTGACCAGTGCCCCCT----GCCCACATGGCAGTCTGCATCGACG--------------------------------     
 4 Saimiri_boliviensis-NW_024100927.1-184277_184812        83.5%  51.9%    ------------------------------------------------------------------------------------GGGTAGGGAGCCTCTCAGAGCAGCTGCTGGTGGTTGAGGGGTGGTGAGACCCTAGGCCTGGACACCTCTGGCTCA-GTGGCCTTGGGGATCGGCAGTGACCTCTGGGCTATAGGGT-GGGAGGGACCCAGCCACCCTGCCCGCCTGGCTGAGCTGCCTGGAATT--CAGTGGGGACTGAGT----ATGGCTGTGCCCTGCCCTGT--GCTGAGTGCTGGGCTGGGAGGAGGGGCATAGC---ATAGTTCATCTAGCTGGGGAGGTC-------ACAGCTCCC-CATAAACAGAAACGACCCCCACAGGGGTGCGCTGATGGGCAGGCATTGGCCCAGGCA---------------------------------------------------------------------------------GCTGCTGGGACGGGGGGGTT-GGAGGGAGCAGGGC---------------CTGCCTGAGAGGGAGACTGC--AGCGGGTAGGCAGGCGGGGTTG----TGGCACACGGAAACAGCGTGGGGTCCCCCAGGTTGGGGAGAGACATGACAGTGTTTAAGGGC---TGGGAGCAGGGCGCAGCCAGAGGTTGCCAATGGTGTAGCCACCTTGGGCCCCTGG---AGAGAGCTGTGCCTCGGAGCCCC-CAGGGGACCTGAGGTC-----------------------------------------------------------------------ACAAG-----------------------------AGCCTC----GATGCACCTGAGTGCAGAGCTGGGGTCCCTGGAG--GCGAGGTCCCA--CCT----------------GCGGCACT-GGAGCCCTGGAGGTGGCCAGGGGATTTC--TCTGAACATGGGGATGTGCTGGCTAAACGTTCAGCTCTGGGCTTGT----TGGGCACTGGGGGCTG-------CAGGTG-------------------TGTGTGTGGGGGGGTGGACGCTCTCCCTTGT---GGGTGGGGGACTGTGTC-----------------------TTTTCTGTAGGAGCAGGGGAAAAAGGGAGCGGCT-TGGTCAGCGGGG-GTGGGGGGCT---GTGCATTCTCACACATC--TTCACCCTTTGTTCTTGA--------------GCCCTGCGGAGGGTGACGAAGAGGTGGGTGAGGAGCTCCCACCTGCTCGGTCACTGCTGCCTTGGGGCTG-----CCGGCAGAGG-AACGCTGG------GCCCTGGGCG-----------------------TCCTGACCAGTGCTCCCT----GCCCACCCGGCAGTCTCCATCGACTCCATCCA-------------------------     
 5 Galeopterus_variegatus-NW_007727608.1-237960_238498     75.4%  30.1%    --------------GGCCGTAGACGTCTGCAGAGACCTCTGGACCTGGGGGTGGGGAGGGTCAGGGGCCC-ACAGCCCGCTGCCCTCCTGGCAGAGCTATCTAGGACTCAGGGGGAC-CGAATGG--------CCCCAGTGCTGTG--CCAAATGCTGGGACGGGGTGAGGGGCAATCGGTCT-------AGCAGGGACT-TGAGAGCTCCCTG------TGAACAGAGTAAGACCCTGGCTGGGGCA--T-GTTGCGGGTGGGC------TGGGGTGCCAAGTGCTGG--CCCGGGCAACC------------TGGCATGGGGGCACTTGGCATGGGGTG-----------------------------TGGAGGCTGCGGGGGC---------------------TGCCTGAGCTGGGAGGCTTTGTGCAGGGAGGACAGGTAG--------------GGTTGC-GGAAGGGAGGGAACCA--GATGGTTCCC-AGGGATCAGGTGGAGACGCTTGGGAGTCT-T---------------------------CCCAGTCCAGGAGA----------------------------------------------------GGGACATTTCCGGTGGCTCTGCTGACAGGCAGGATCCAGGTGTACC--AGGGTGGGGCCTCAGCCCAGTGGTTGCCAAGGATGCTGCCACCACAGGGC--CCCAGGAGAGAGCCACACTGCAGGAGCCCCCGAG-----------------------------AGGGTGTCCTGGAGTGGGGGCTC-----CTGACCCCAGTAGTCAGCGTAGGAGCGGGGCAGGGACTGCCCTCTGGGCTGGGGGGGTGGAGCCAC----TTGGAAGCTGCCCAGTCAGGAGGAGCCCCAGCGCCCAGGCTGGAGCA--TCT----------------GCTCTGTGCCAGGCACTGTTCCTGGTACTGGGCTTCCTGTGGGGACTTGGCAGATGTGGAGCTGGTGTTCTAGCCACGAGATGAGCAGTTCCACACGACGTGCTGAACCCTGTAGAAAATACAG-------------AG-----------------GCTGGCAGCACGGAGTGGGTGGGT-AGATGCGAGGT--------------CAGGGAGGCCCCCTGGGGAAGGGGTGCTTGGGCAGAAAC-TGCAGGCTGGGACCTGAGGACA----------CGGAACTAAGATGGGCCCTCCAGCCTCCCCCA--------CCCTTGGCATGTGGGGAGACCCAGTTGGGTGCTTAGA--GCCCACCCTGGACTTGG-AGGGTCCCGGTGGGCT------------------------------------------------------------------------------------------------------------------------------------------------     
 6 Microcebus_murinus-NC_033661.1-169914_170045            68.0%  28.5%    -------------------------------------------------CACCGTGTGTGCCTGTGTGCCCGCCGAGCAGTGGAGCGATGCATGAGCGCCATGCAG----GA------------------------------G-----------GGGACGCAGATGGTGAAGCTCCGCGGCAGCTCCAAGGGCCTGGCCC-GCT---T-CTACT------ACCTGGACGAGCACCGCTCCTGCATCCG--CTGGCGGCCCTCCCGCAAGAACGAGAAGGCCAAGAGTGA---GTGGCCGCCCCGCAGGTGGGGTGGGCCCAGAG-CCCCCGGGGGGCACAT------------------GGGGTGGGGATCCCTCTGGGGGGGGCTC-CTGG-TGG-CACTGGGGGAGGGCTTTGCCGCAAACACCGGCTC-AGGCCCCGGCGGGGAGGGCTCAGCTCAGGCTGTGGGGGCTGCAGGGGCCGCCTGAGCTGGAGG-CCTTGTGCA-GGG-CACGCGGTCGGGGCC-C---------------------------CAGGGTCAGAGATGG--------------------------------------------GGCATTTCCAGGGCCTCCTCTGGCTTTGCTGATGGGCAGGACCCAGGTGTGCC--AGGCACGGGCCTCAGCCCAGCGGTTGCCAAGGGTGCAACCCCCGTGGGGCCCTGG--G--AGAGCCTCGCTGTGGAGCCCCAGGAGGGCCC--GGCAT-AGGCGAGCCCCAGGGTGACGTGTCCTGGAGCAGGTGGCGCCTCCTGGGCCCCAGAGCCA-GCGTGGGGGCAGGGCCGGGGCCACCCTCTGAGCCAGGTGATGTGGCGCTGC---CTGGAGGCTGCCCAGGCAGGAGGAGCCCCAGCACCCGGTCGGGAGCG--GCT----------------GCTCTGAGCCAGGCACTGTTCCCATACTGGGCATCCT-GCAGA-ACTCGGCTGACGCGGAGCTGATGTTCTAGCGGTGTGGGAGGCAGCGCCACCCAACACGCTGAGTGTCCCCGGCTGGGCACTGGGACCCTCCTGCCCGTGCAGCCTCGAGGCAGCCCCACCTGCAGCAGGCAGCAGGATGGAGGGCGCC-GGGCGCACACGGGCTGGACAGGCCCCTGGGGAAGGGACGACTGGGCGGGACC-TGCAGG----------GGGACA----------CGGGGCTGGGC--CAGACCCCTTGTGCCGCCT--------CCCACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 7 Phocoena_sinus-NC_045763.1-173027_173147                74.5%  27.4%    -------------TGGCCTTGGAGATCCTCGGTGACATCTG------GACGCAGTGGGGTGAG--GGCCC-TGGCCCTGCTGCCCACCTAGCAGAGCCCTCTGGGACTCAGTGGAGACTGAGTAGCCCCAGT-GCCCAGCCCTGCA--CCGGATGCTGAGATGCGCTGAGAGGCGAAAGTCTTTCAGTCTAGCCGGGGAG-ATAAGACCGCTGG------TGAGCA---GCGAGACCCTGCTGGGCAC--C-CTGAGGGTAC-GA------CCCGGTGCTGAATGCTGG--CCCAGGCAGCC------------TGGGGCTTGAGCAGCTGACAGGCGTGT------------------------------GGAGGCTGCAGAGCTGTCTGG-ATGGGTGGTGGCGGGTAATGAGCTGTGAGGATT-------------------------------------------TGGGCAGGGACCAGGCTGGGGGTCCT-GGGGGTCAGGAAGAGACACGTGAGTCCTT------------------------------ACAGGCGAGAGAGG--------------------------------------------GGACTTTACGGCCCCTCCTCTGGCTCTGGCGACTGGAGAGACGCAGGTGTGCC--GGGGCAGGGCCTCAGCCGCATGGTTGCTAAGGGCACTGCTGCCACCATGGGGCCCAGGAGAGAGCCACGCTGTGGAGCCCCCTGGG-----------------------------AGGGTGTCTTGGAGGAGGGGGCT-----GG--------------------------------GACTGCCCTGTGGGCCCCGG--GGAGGTGGAA----CCGCCACTGGCTGCTCAGGCAGGAGCCCCTGTGCTCCATCCGGAGCG--CCT----------------GCTCTGTGCCAGGCACTGTTCCCAGCACTGGGCATCCTTTGGGAACTGAGCCGCCATGAAGCTCGTCTTTTGAGTGCGAGATGGGTGACACCACCTAACGGTAGGATAACTTCACATCATGCTG-------------AGTGACGAGAACAC---AGGATGGCA-AATAGAGGGGAGCAGGTGGGTGGGGGTC--------------GTGGAGGCCCCTCTGGGGAAGGGGTGACAGGGCAGAGACCAGCAGGCTAGGACGGGGGGAGA---------------------------------------------------------------------C---------------CA--GCTGACTCTGGCCATGG-AGGGGTCCCCAGGAGGGA-----GGAACTGT----GGGGGCAGCT-GTCTCCTGACTGTCAGCGCCCCCTAATCTGGGGGCCCAGAACCCCCACCCCCACCACGA-------------------------------------------------------     
 8 Lemur_catta-NC_059130.1-171761_171876                   71.9%  27.4%    -----------------------------GCGGCCCTCGCGCAAGAACGAGAAGGCCAAGAGTGAGTGGCCGGCCCGGAGGGGGGCGGGCCCAGAGCCCCCGGGGAGCACGCGGGGTGGGGGTCCCTCCCGG-GCAGCTCCGG-----------GATCAGGTGGCCTTGGAGTTCCACAGTGACCCCTGGGCCACGGGGA-AGG---C-CCGTG------CC--CGCCTGGCAGAGCTCCCTGGGACA-------------------------GTGGGCACAGGTGTCA-----------------CCAGTGCCTAGCCCTGTG-CTGGACGCGGGGCTGG------------------GCTGAGGGGCAAAGCAGGAGGGGCCCCCACCAA-GGT-GCATTGAGGGGGGCTTGGCCACAAACGTTGGCTCAGGCCCCTGGGG-----------ACGAGCCCTGTGGAGGCTGCAGGGGCCACCTGTGCTGGAGG-CCTTGTGCA-GGGGAC------GGGTCAG-G---------------------------GTCCCGTGGGTCACA--------------------------------------------GACATTTCCAGGACCTCCTCTGGCTTTGCTGATGGGCAGGACCCAGGTGTGCC--AGGAACGGGCTTCAGCCCAGCGGTTGCCAAGGGTGCAACCCCCCACGGGGCCCAG--G--AGAGCCTCGCTGCAGAGCCCCCGAGGGCCTG--TGCTCGGAGCGAGCCCCAGGGTGAGGGCGCCCTGAGCAGGTGGCGCCTCCTGGGCCCCAGAGGCCGGTATGAGGGCAGGGCCGGGACTGCCCTCTGAGCCAGGGGACGTGGCGCTGC---CCCGGGGCTGCACAGGCAGGAGGAGCCCCAGCACCTGGCCGGGAGCG--GCT----------------GGTCTGAGCCAGGCCCTGTTCCAGCACTGGGCGTCCC-GGGGA-CCTCGGCTGACGCGGAGCTCGCGTTCCAGCGGTGTGGGGCAG--CACCACCTAACACCCTGGGTGCC-CCCCGGCGGGGCGGGGACCCTCCTGCCTGTGCAGCCTCCAGGCAGCTCCACCGACAGCAGACAGCAGGATCGAGGGCACT-GGGTGGACGCGGGGTCGGCAGGAACTGCAGGGGGACACGGGGCC------------------------------------------------------GGGCCCTTGTGCCGCCTCC--------TGCCCGGCACTCGGGGAGACCTAGTTGGGTGCTTAGAGCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
 9 Propithecus_coquereli-NW_012152752.1-172437_172576      70.9%  26.8%    -----------------------------------------------------------------------------------------------------ATCAG------------------------------------------------------GTGGCCTTGGAGTTCCGTAGTGACCCCTGGGCCATGGGGA-GGG---C-CCATG------CC--CGCCTAGCAGAGCTCCCTGGGACT--CAGTGGGCACAGGGG----GTCACCAGTGCCAGCCCTGT--GCTGGGCGCGGGGCTGGGCTGGGGGGCAAAGGG-CCAT--CAGAGCCCCT------------------GGA-------A--GCAAGAGGGCACCCC-AGTG-AGG-TGCATTGGGGGGGCTTGGCTACAAACACTGGCTCAGGCCCCTGGCGGGGAGGGCTCAGCTCAGGCTGTGGAGGCTTCAGGGGCCACCTGAGCTGGGAG-GCTTCGTGC-AGGGGACGGGGTCGGGGT--------------------------------CCCGAGGGTCAGA--------------------------------------------GGCATTTCCAGGACCTGCTCTGGCTTTGCTGATGGGAAGGACCCAGCTGTGCC--AGGAACGGGCTTCAGCCCTGCAGTTGCCAAGGGTGCAACCCCCGTGGGGCCCCAG--G--AGAGCGTCGTTGCAGAGCCCCGGAGGGCCTG--TGCAT-AGCCGAGCCCCAGGGCGAGGTGTCCTGGAGCAGGTGGCGCCTCCTGGGCCCCAGAGACCAGTATGGGGGCAGGGCCGGGACTGCCCTCTGAGCCAGGGGACGTGGAACTGC---TTCGAGGCTGCATGGAGAGGAGGAGCCCCGGCACCCAGTTGGGAGCG--GCC----------------GCTCTGAGCCAGGCACTGTTCCAGCACTGGGCATCTC-GCAGGAAGTTGGCTGACACAGAGCTGGCGTTCTAGTGATGTGGGGGGCAGTGCCACCCAACGTGCTGAGTGCCCCCCAGCCGGGCA-------------CTGGGACAGCCTCAAGGCAGCTCTGCCGACAGCAGACAGCAGGATTGAGGGCACC-GGGTGGACACGGGGTCGGCAGGCCCCTGGGGAAGGGGTGACTGGGCAGGACC-TGCAGG----------GGGACA----------TCGGCCAGGCC--AGGCCCTCATGTCGCCTCC--------CACCCAGCTCTCAGGGAGACCCAGCTGGGTGCTTAGACCGACCACCCTGGCCTTGG-AGGGGTCCCCTGCCAGAG-----GCTGGGAACA-GACTCTGA-------------------------------------------------------------------------------AGCA-----------------------------------     
10 Meles_meles-NC_060066.1-183774_183875                   81.2%  28.9%    -----------------CTCCAGGGGG---------CTCTG------GGCCTGGCACAT------GGGTC-CAGTGGACTTGGAGCTTTGAGGGGACCT-TGGATGCCAGGTAGGGA----------------------------G-GGGTCGGAGCCCAGTGCCCTTCAGGGCCCTGGCC------TTGTTCCTGCCTGGCAGAGCCCTCGAGGACTC----------------------------------TGGGGACCGGCTG------------CCCTTTCCTG---GGTGGGATCTGGGATGGGCTGAGGGGCAAAAG--GAGCTTCCGTCGAGCTGAGGGACGAGACCTCCCGGAAATACAGAGAGCGCCCCCGGCTGGG----CA---CACCAAGGGCCAGGCGTCTGTGCCCGGGGTTAGCTCAGGCAGCCTGGGGCC-----------AGGAGG--------GG--------TCCTGAGCTGG-------------GAGGGTCTGTGCAGGGGAGG-G--------GAGGGCA--TGGTTGATCTCCGAGCACGGCATGGCAGGAG--CCAGGC----------------TG------AGAGGCAGGAAGGGACACGTTAGAGCCCG--CACGGGCCGGGAGAGACCCAGGGGAGCC--AGGGCCAGGCCTCAGCCCAGCAGTTGCCAAGGGCACTGTCGCTGCCGTGGGGCCTGGGAGAGAGCCGGGCTGTGGAGGCCCCTGGAGGGCATCCTGGA------------------------------GGAGAGGCCCGGC-------------------------------------ACT--------------------------GCC---CTC---CGGGCCCGGAGGGGTGGGGATGCAGTGCGCACCGGGGCTC---CTC------------------CTTGCACGCGGCACTGTTCCCTGTACCGGGTTCGAGTGCGA-GGTGGGCCG--T--CACCGCACAACAGGGCGACTTCACGCCCAGCTGAGCACGGGAGAAAG-----CACAGAGG-------------------AC---GGAGAGAGA-------------CGG------GACAGT-AGATGGG--GTC--------------ACAGAGAGGGTGAC--------------AGGGCAGAGCCTGGC-CGGAGGGG-AGGGGAGGCT------------GACGGCACAGCTTAGAGCTGTCCC---------------------CGGCCAGGAGGGAGGAAT------GTGGGGCAACTGGTCCCTGACCGTCACCCTCCCGGGCCGGGGTCTCAGAACCCCCACC-CCTGCCAGGCACACGCACGCACCGAGGGCGCTGGAGAAGGGGAGTAGGCAGCCCCCCCGGTGGGC-------AGGCATGC-CTGG-GAGCTC----AGGGAGTGGGAGCAGG--------------     
11 Mustela_putorius-NW_025422005.1-184200_184301           81.0%  28.6%    ------GCAGCAAAGTCGGGGGCTCTG---------GTTTG------GCACAAGGGTCC------AGTG-------GACGTGGAGCTTTGAGGGGACCT-TGGATGCCACGTAGGGA----------------------------G-GGCTTGAAGCCCAGTGCCCTTCAGGGCCCTGGCC------TTGTTCCTGCCTGGCAGAGCCCTTGAGGACTC----------------------------------TGGGGACCAGCTG------------CCCTTTCCTG---GGTGGGATCTGGGATGGGCTGAGGGGCCAAAG--GAGCGTCCGTGGAGCTGAGGGACAAGACCTCCCAGAAATACAGAGA---GAGAGCCCCCAG----CT---G--GGCACACCAAGGGCCAGGCGTCTGGGCTAGCTCAAGCAGCCTGGCGCC-----------AGGAGG--------GG--------TCCTGAGCTGG-------------GAGGGTTTGTGCAGAGGAGG-G--------GAGAGCA--TAGTTGATCTCTGAGCATGGCATGGCAGGAG--TCAGGC----------------CG------AGAGGCAGGAAGGGACACGTTAGAGCCCG--CACAGGCCAGGAGAGACCCAGGGGAGCC--AGGGCCAGGCCTCAGCCCAGCAGTTGCCAAGGGCACTGTCACTGCCGTGGGGCCTGGGAGAGAGCCGGGCTGGGGAGGCCCCTGGAGGGCATCCAGGA------------------------------GGGGAGGGCTGGC-------------------------------------CCT--------------------------GCC---CTC---TGGGCCCGGAGGGGTGGACATGCAGTTCTCACCTGCGGCT---CCT------------------------CCTTGTGCTGTTCCCTGCACTGGGTCTGAGCGCGA-GGTGGGCAG--T--CAGCTCACAATAGACATCT-TCGTGTCCAGC-TGAGACAGAAGAAAA-----CACAGAGG-------------------TT---GGAGAGAGA-------------AGG------GACCAGTAGATGGG--GTC--------------ACAGAGGTCCTTCGAGGGCAGGGGTGACAGGGCAGAGACTGGCCAGGATTGG-AGGGGAGGCC------------AAGTACACTGTTTAGAGCTGTCTCTGGCC--------TTGGAAGGTCTCCAGGAGGGAGGAAT------GGGGGGCAGCTGTC---TGTCTGTCACCCTCCCAGTCCAGGGGCTCAGAACCCCCCACCCCTGCCAGGCACAGGTACGCACCGAGGGAGCTGGAGAGGGAAGTAGGCAGCTCCCCCAGGTAGGT-------GGGCTCGG-CCCA-CCT-------------------------------------     
12 Lontra_canadensis-NW_022631019.1-185016_185117          81.4%  27.4%    ---TCCGCTTCTACTTCCTGGACGAGC-----------ATT------GCTCCTGCGTCC------GCTGG-CGGCCGTCGCGCAAAAATGAGAAGGCCA-AGAGTGAGCGGCGGCGC----------------------------T-GGG-GGGAGGGTCGTGGGGTGGGGGGCAGCTGCG------GGCAGCTGGGAGGGCAGCAAGGTCGGGGGCTC----------------------------------TGGGCCTGGCAC-------------ACGGGTCCAG-----T-GGATTT--GGAGATTTGAGGGGACCTTG--GAT---GCCAGGTAGGGAGGGGCCGGAGCCCAGTGCCCTTCAGGGCCTGGCCTTGTTCCTG----CC---T--GGCAGAGCCCTCAAGGACTCTGGAGACCAGCTCCCCTTTCCTGGGGCC-----------AGGAGG--------GG--------TCCTGAGCTGG-------------GAGGGTTTGTGCAGGGGAGG-G--------GAGGGCA--CAGTTGATCTCTGAGCACGGCATGGCAGAAG--CCAGGC----------------TG------AGAGGCAGGAAGGGACACGTTAGAGCCCG--CACAGGCCGGGAGAGACCCAGGGGGGCC--AGGACCAGGCCTCAGCCCAGCAGTTGCCAAGGGCACTGTCGCTGCCGTGGGGCCTGGGAGAGAGCCGGGCTGTGGAAGCCCCTGGAGGGCATCCTGGA------------------------------GGAGAGGGCTGGC-------------------------------------ACT--------------------------GCC---CTC---TGGGCCCGGAGGGGTGGAGATGCAGTTCTCCCCGGGGCTC---CTC------------------CTTGCACGCGGCTCTGTTCCCTGCACTGGGTTCGAGTGCAA-GGTGGGCAG--T--CACCTCACAATAGGGCAACTTCATGTCCAGCTGAGCATGGAAGAAAA-----CACAGAGG-------------------AT---GGAGAGAGA-------------GGG------GACCAGTAGATGGG--GTC--------------ACAGAGGTCCCTCGAGGGGAGGGGTGACAGAGCAGAGACTGGCCAGGATTGG-AGGGGAGGCT------------GAGTGCACTGTTTAGAGCTGTCTCTGGCC--------TTGGAAGGTCTCCAGGAGGGAGGAAT------GGGGGGCAGCTGTTCCCTGACTGTCACCCTCCCAGTCCAGGGACTCAGGACCCCCACC-CGTGCCAGGCACATG--------TACGCATGTGGAGAAGGAAGTAGGCAGCTCCCCCAGGTAGGT-------GGGCTCGG-CCCA-C---------------------------------------     
13 Ailuropoda_melanoleuca-NC_048228.1-184749_184850        81.4%  29.7%    -------------------------GG---------CTCTG------GGCCTGGCACAT------GGGTC-CGGCGGCCTTGGAGCTTTGA-GGTGACC-TGGATGCCAGGTGGGGA----------------------------A-GAGTCAGGACCCCATGCCCTTCAGGGCCCTGGTC------TTGCGCCTGCCTGGCAGAGCCCTAGAGGACTC----------------------------------TGGGGACGGAGCG------------CCCTTTCCTG---GGCTGGGTCTGGGATGGGCGGAGGGGCAAACG--GACCTTCAGTCCAGCTGGGAGATGAAGCCTCCCAGAAACAGAGAGAGAGACACCCCCGCTGGGCACA---CACCGAGGGCCAGGCTTCGGTGCCTGGGGTTAGCTCAGGCAGCCTGGGGCA-----------GGGGGC--------TGCCGGGCTGCCTGGAGCCGG-------------GAGG---GTTTGTGCAGGGG-T--------AAGGGCG--AGGTTGCTCTCTGAGCAGGGCATGGCAGGGA--CCAGGC----------------TG------AGAGGTAGGAAGGGACACATCAGAGTCCT--CACGGGCCAGGAGAGACCCAGGGGTGCC--AGGGTAGGGCCTCGGCCCAGCAGTTGCCAAGGGCACTGTCGCTGCCATGGGGCCTGGGAGAGAGCCGTGCTTCGGAGGCCCCTGGAGGGCATCCTGGA------------------------------GGAGAGGGCTGGG-------------------------------------ACT--------------------------GCC---CTC---TGGGCCCGGGGAGGTGGAGCCCCTGTGCTCACTTGGGGTTC--CTC------------------CTTGTATATGGCACTGTTCCCTGTACTGGGTTCGAGCATGA-GGTGGGCAA--TACCACCTCACGACAGGGCAAGTTCATGTCCAGCTGAGCACCAAAGGAAA-----CACAGAGG-------------------AT---GGAAAGAGA-------------GGG------GACAGGGCGATGGG--GTC--------------ATGGAGGCTCCTCATGGAGAGGGGTGATAGGGCAGAGACAGGCAGGCCAGGA-TTGCGGGGGGGGGGCGGTGTGTGTGAGTGTGCTGGTTAGAGCTGACTGGCT--------TTGGAGGATACCCAGGAGGGAGGAAC------GGGGGGCAGCTGTTCCCTATCACTCCCCCCAGTCTGG--AGGCCCAGAACCCCTCCACCCCTACCAGGCACATGCATGCACCCAGGGAGCTGGAGAAGGGAGGTGGGCAGCCCCG----------------------------------------------------------------------     
14 Equus_przewalskii-NW_007674960.1-183220_183331          76.6%  26.2%    ---------------CTCTGGGTGCAGGGTGGGGTGGGGGC------GGGGCCCCATGCCCTTCAGGGCC-CAGACTCTACCACGGCCTGGCAGAGCCCTCTGGGACTGAGTGGAGACTGAGTGGCCCCAGG-GCCCGGCCCTGTG--CTTGATGCTGGGATGGGCTGAGAGGCAAAGGACCTTCAGTCCCGCTGGGGAG-ATAAGACCTGCTG------CAGAGA---GAGAGCACGCG--GGCCAT--G-CTGTGGGTAGGGC------TTTTATGCCAAGGGTTGG--CCCAGGCTGCC------------TGGGGCGTGAGCGGCTGACGTGGGGAT----------------------------GTGAAGGCTACAGGGCTGCCTGG-AG----TGAGGAGGGTCCTGAGCTGGAAGCATT-GTGCAGGGGACACATGGGATGGGGTCGATCTCTGAGTGGGGCACTGCAGGGACTGGACTAGGGGTCCT-GGGGGTCAAGAAGGGACACAGAGCCCTCA------------------------------TGGGCAGGGAGAGG--------------------------------------------GG-TGCTACTACCCCTCCTC-TGGTTTGCCCGCGGGAGAGACCCAGGTGTGCCAGAGCAGGTTGCCTCAGCCCTGTGGTTGCCAAGGGCACTGCCACTGCCACGGGGCCCAGGAGAGAGCCACGCTGCAGAGCTCCCTGGG-----------------------------AGGGCCTCCTGGAGGAGGGGGA-------------------------------------------------------------------------------------------------GTGGAGCCCCTGTGCTGTCAGGAGTT--CCT----------------GCTCTGTGCCAGGCACTGTTCCCCATGCTGGGCATCCTGTGGGAACTTGGCTGACTAGAAGCTGGCCTTCGAGTGTGAG-GTGGGCAACGTCACCTTATGAT-----AGGGCAACCACGTGCTG-------------AGTGACAAGAAAAATACAGAAGCTGGTGATAGAGGGGAGTGGGCGAAAGGGGATC--------------A-CAGAGGCCTCCTGGAGAAGGGGTGATTGGGCAGAAACCTGCAGGCTAGGACTCGGGGAGA---------------------------------------------------------------------CCCAGTTGGGTGTTTAGA--GCTGACTGTGGCCCTGG-AGGGGTCCCCAGGAGGGA-----GGGACACACC-TGCA-----------TTCTCGCAGGGAGCTGGAG--AAGGCAGGTGGGATAGGCCCCTAGGTGGG---------------------TGGGCTCTGCATGCCTGGG---------------------     
15 Vulpes_vulpes-NW_020356486.1-183915_184015              76.1%  25.0%    -------------GCTCCTGCAT----------------------------------CC------GCTGG-CGGCCCTCACGCAAGAATGAGAAGGCCA-AGAGTGAGCGGGGCAGCCGGGGGGG-GGAA---CGACTGGGGGGGC-ATCTCAGGGGCAGCA-GCATCCTGAGCCCTGGGCC-----TGGCACGTGGGTC-CAGTGGCCTTGGGGTTTTGCGGTGACCTCTGGATGCCAGGTGGGGAG--GGGTAGGGGCCCTATG---CCCTTCAGTGCCTTGGTTGTGTTCCTGGATCTGGGTGGGGCTGACGGATAAAAG--GAACTTCAGTCTGGCTGGGGAACAAGACCTTCCAGAAACAGAGAGAGACACACGC------------------------------------------------------CAGCCGGGCACA-----------A-CGAG--------GGCAAGGCGGCCTGGGGCTGGGAGGGTCC----TGAGCCAAAGGATTTGTGCAG-G--------AAGGGAG--AGGTTGATCTCTGAGCAGGGCATGGTGGGGA--CCAGGC----------------TG--------------------------AGGGGTAGG--AATGGACCAGGAGAGACCCAGGGCTGCC--AGGGCAGGGCCTCAGCCCAGCAGTTGCCAAGGGCACTGTCGCTGCCAGA-GGCCTGGGAGAGGGCCGTGCTGCAGAGGCCCCTGGAGGGCATCCTGGA------------------------------GGAGACGGCTGGC-------------------------------------ACT--------------------------GCC---CCT---TGGGCCCAGGGAGGTGACACTGCTGAGCTCAGTTGGAGTTC--CTC------------------CTTCTGCCCGCCACTGTTCCCTGCACTGGGCATCCTG-GGA-GCTGGGCAG--TCCCTCTTCACAACAGGGCAACCTCACGTCCTGATAAGCACTGGGGTCAG-----ATAGGGTC-------------------TC---GGAAGCCCC-------------CGGAG--GGGAGCAGCCAACAGG--GCA--------------GGGCCGG---TGGGTGGGCCCAGGGTTCTGTTCAGAGCTGAGTCCCCATGAG-GGA-GGAGAT------GGGGGCAGCTATTCCTGGTGGTCATGCCTCCTAGT--------CTGG---AGGCCCAGATCCCAGGGAA------GTGGGCTCTGC-ATGCTGAGCGCTCACGGGTGAGAGCAGAGGA---------CAGAGGGTGAGACAGGAGGATCCCCAGAAGGGCTGCCCTGAAGGAGGCAGGAGGAATGAGGC---------------------------TGG-CTAGAG----GGGCAGTGGTG-------------------     
16 Capra_hircus-NC_030823.1-171830_171965                  75.2%  25.2%    -------------TGGCCTTGGAGAGCTGCAGTGGCCTCTG------GATGCAGTCAGGGAGGGAGGGCC-CCAGCCTGCTGTCCACCCAGCAG-ATCCCCTGGGGCTCCATGGAGACTGGGTGGCACCCAT-GCCCAGCCCTGCG--CCGGGTGCTGGGAAGGGCTAAGAGGCAAAAAG----------------------------------------ACCTTT---AGTCTGGCCCCCTGGGCAC--T-CTGAGGACAG-GA------CCCGGTGCCCAGTGCTGG--CCCAGGCAGCT------------TGGGGCTTGAGCAGCCGGCAGGGGCAT------------------------------GGAGGCTGCAGGGCTGCCTGG-ATGGGTC-AGGAGGGTAATGAGCTGTGAGGATT-------------------------------------------TGTGCAGGGACCTTGCTGGGGGTCCT-GGTAGTCAGGGAGGGACACGTGAGCCCTT------------------------------GCAGGTGACAGAGG--------------------------------------------GGACTTTGCCGCCCCTCCTCTGGCTCTGGCAGCTGGAGACATGCAGATGTGCC--AGGGCAGGGCCTGAGCCCAGTGGTTGCTACGGGAGCTGCTGCCACCACAGGGCCCAGGAGAGACAC--ACTGTGGAGCCCCCTAGC-----------------------------AGGGTGTCTTGGAGGAAGGGGCT-----GG--------------------------------GACTACTCTGGGCCCT--GG--GGAGGTGGAG----TCACCGTGAGCCGTGCAGGCGGCAGCCCCGACGCTCCATCGGGAGGC--GCT----------------GTTT------------------CGGCGCTGGGCTTGCCGTGGGAATTTAGCCCACGTGACTCTGGTCTT--TGGGTGTGAGGTCGTGACACCACCTGATGGTAGGATAACTTCATGTCATGCTG-------------AGTGATAAGAAGGACACCAGATGGCA-AATAGAGGGGAGAGGT--GGATAGGGTC--------------ATGGTGACCCCTCTGGGGAGGGGG-TGGTAGGTTGAGGCCAGCAGGCTTAGGATGGGGGAGA---------------------------------------------------------------------C---------------CA--GCTGACTCTGGCCTTGG-AGGGGTCCTTGGGAGAGA-----GGAATGGGGC-GAGAGGCAGCT-ATTTCCTGACTGTCAGCATCCCCTAATCTGGGGGCCCTGAACCCTTGCCTCCTTGCCAAAGACATGTGAGCCACAGGGAGCTGGATGGAGAAGCAGGCAGGACAGGCCCCCTCC     
17 Halichoerus_grypus-NW_023403807.1-184027_184128         80.8%  25.0%    ------GGACTCAGATGGTGAAGC-------------TCCG------TGGCAGCTCCAA------GGGCC-TCGTCCGCTTCTACTTCCTGGATGAGCA-TC-----GCTCCTGCAT----------------------------C-CGCTGGCGGCCCTCA-CGCAAGAATGAGAAGGCC------AAGA--GTGAGCGGGGAGGCCCTAGGGGGCAT-----------------------------------GGGGGCGGGGGG------------GCCTGAGCAGCTGTGGGGCAGCTCGGGGAGCAGCAAGATCCTGAG--CCCTGGAAGTCTCCAGGGGGCTTTGGGCCTGGCATA--------TGGGTGACCTCTGGACGCCAGGGGGGAGGGCTCGGGGCCCCAT-GCCCTTCAGGGCCCTCGCCTTGTTCCTGCCTGG-----------CAGAGC--------CCTCGAGGACTCTGGGGCCCG--------------AGCGCCCT----TTCCTGT-G--------CTGGATC--TGGGATGGCTCTGAGCAGGGCATGGCAGGGA--CCAG------------------GC------TGAGGCAGGAAGGGACACATTAGAGTCCT--CACGGGCCAGGAGAGACCCAGGGGTGCC--AGGAGCGGGCCTCAGCCTAGCAGTTGCCAAGGCCGCTGTCGCTGCCATGGGGCCTGGGAGAGAGCTGGGCTGCGGAGGCCCCTGGAGGGCATCCTCGA------------------------------GGAGAGGGCTGGC-------------------------------------ACT--------------------------GCC---CTC---TGGGCCTGGGGAGGTGAAGCCGCTGTGCCCACTTGGGGTTC--CTC------------------CTTATGCGCGGCACTG-CCCCTGTACTAGGTCCGAACGTGA-GGTGGGCAG--T--CGCCTCACAGTAGGGCAACTTCTTGTCCAGCTGAGCACCGAGGAAAA-----CAGAGAGG-------------------AT---GGAGAGAGA-------------GGG------GACAGGCAGATGGG--GTC--------------ACAGAGGCCCCTCGGTGGGGGGTAATAGGGC--AGAGACAAGCAGACCAGGA-TCG---GGGCGGGGGGGAGGCCGAATGCACTGTTTAGAGCTGACTCTGGCC--------TTGGAGGATCCCCAGGAGGGAGGGAT------GGGGGCAGCTG-TTCCCTGTCAGCCCCC----------CAGTCTGGGACCCCCCCCACCCCTGCCAGGCACATGCACGCACCCAGGGATCTGGAGAAGAGAGGTGGGCAGCCCCCCTCCCCGGG-------TAGGTGGG----------------------------------------------     
18 Sturnira_hondurensis-NW_023520724.1-172465_172579       78.7%  26.5%    ------------------------------------------------------ACAAG------GGCTC-CACTGGCTTTGCAGTTCTGGGGTAACCT-CTGCACATGGGGCGGGG-----------A----------------G-GGGGCGGGGCCC-C------------------------------------------------------------------------ACGCCCCCTGGGACA--CGGTGGGGACCCAGCA---GCCCTCGTGCCCAGCCC--TGTGCCGGACGCTGGGATGGGCTGAGAGGCCAAAG--GACCTTCAGTCTAGCTGGGCAGATGAGACCTCCCATACACGGGGGCGATGCCGGCTGGGCACACTGAG-----GGTAGGGCTTGGGTGGGTGCCAAG-TGTCCCCTAGGCAGCCTGGGA---------------CGTG--------GGAGGAGGGATCCTGAGCTGGGAGGGACTGTGAAGAGGAGGTCCACTTCTGCGT-G--------GGGAGCG--GGCTGGGGGTCTAGGGTCAGGAAGGGAGGAG--CCCCCT----------------GGG---CCAGGAGGGGGACTGGACTGTCCCTCCCCTT--TGTCAAGCGGGAG-AGGCCAGGTGTGCC--GGGGCACTGCC----------------------------TGCCCCCCTGGGGCCCAGGGGAGAGCCACACTGGGGAGGCCCTGGGAGGGCATCCGGCA------------------------------GGGGGCTGCGGCT-------------------------------------GCC---CCCGGACCCAGGG-AGTGGGGCCACC---CCATGGGCTGCACAGGCAGGAGGAGCCCCTGCACTCAGTCTGGGGCGCTTGC------------------TCCGTCCCAAGCACTGTTCCCAGCACTGGGAGCTCAGCCAA-CAAGAAG-C--TGGTCTTCGAGTGTGGGACAGCCCCATGTCCTGCTGGGTGACAAGGAAGC-----ACAGGGTG-------------------------GGGTGGAG-------------TGGAG--GGGTGTGGTGGGTGGGGGCTC--------------ACAGAGGCCCCTCTGA------------GGAGCAGAGACCCACAGGTTTGGA-TGG-GAGACT------------GTGGTGGGTGTGGAGAGCAGATGGTGGCC--------TGGGAGGGAGCGGCGCTGGGAGGGAAGAGTAGGTGGGGCAGCTGTGCCTGGACTGTCGGTTTCCC------TCGTCTGGAGGCCCAGAAC------CACCTTGCGGCACACACACCTTGACCTGGTGAAGGCAACTGGGCCGGCCCCCAGCAGGTG--------GGCTCGC-CACACCTGGGGAGACAGGGACAGGGGAACGGGACGGGG-------     
19 Urocitellus_parryii-NW_020540697.1-277584_277643        75.2%  29.7%    -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACCACCGAGTCCCAGGAGGGAACACGGT------GAGGAGGTCCTGGGTTGG--ATGGCTCCTCCAGACCCCCAGGGGCCAGCATGA-ACTGTCCCTTGGGTCCTGGGAGGTSGAGCCTCCCGAAGGCTGCTCAGATAGGAGAAGCCCC---AGC-GGTCTTAGATGTCCACTCTGTGCTGGGCACTGTTCCT---GGCACTGGG---------------CTTCCTGTGGGAACTGAGGCGTGGAGC--TGGTGTGGT-CATGGTGAGGTGGGCCTTTGCTCACCGTACTGACCACTGAGAAACCCAGGAGGGGCAGGGGAGCAGGCAGACGCAGGTCAGGGAGGCTGCCGGGGAGCAGCGGGGGCAGAAACCAGCAGACTGGGCTGGGGCCCCGCCAGCCTCCCCTACCCCAGAGACCCAGCTGGTGC-------------TTGGAGCCCCCCTGGCCATGAAAGCCTCCCAGTGGGGCAGGAGC-----------------------AGC----------------------------AGGGGCCAGCTGTCCTCTGAACTGATATC--------CCGCCACATGCCAGGGATAGAGAAAGGC----------CAGCAGGCA----------------------GCGGGTGGCG---GGGGCAGCAGCTGTGCTGAGCCCGGGGTGCCT--GGT----------------GCCCAGAGGGGCTGCCTG----TGGCCTGCACATCTG--GGAGGGTCCTGCCGACACCTGACAGGGCCTGAGCCACGCGGCTTCCCTCTGCACCACTCCACACCT---G---CCAGGACTGGTCTCAGAGGCAGCTGCAGGACTGAAAAGGAGCTGGCCTGAGCTGGACGGGTGGACGGGCTCCTGGGAGTC---------CCGAGTCGGCCAGACGCCTCTCAGGAGGGAGGAGGGGCTGCGGGGCCAGAGCCCAGCCACAGGGGGGT---CCTCAGCCCAGTGTGTC--TGCGCTCCTACTCCTG----------------AAAAGGCTGGGGCCCCG--CAGGCTCGGGGCGTTGCTGGCGCTGGGCCGGT-------CCGTGAGCGGAG-----GTCAGAGCCC-CAGGGTGTGCAGCCCGGGCAGGTGAGAGATGCCTGGCCCCTGGGAGGCCCTGACCCGCCCTC------CCCACCAYCCGCAGTCTCCATCGACTCCATCC--------------------------     
20 Castor_canadensis-NW_017871110.1-166814_166876          77.9%  25.6%    ------------------TTGGAGTTCTGCAGTGGCCTCTGGACTGCAATGTGAGGGCAGGCC-AGGGCT-CTTGCCTGACTGTTCCCTGGCAGGGCT--CTGGGACTCAGTGGGGATTGT--GA-CTCAGT-GCCTAGCCCTGTG--CGAAATGCTGGGGTCAGCGAGGGGCAAAGGGCGGTTACCT-------------------------A------GCTTGGGGGTGAAGAGCTTCCTGGAA---------------------------------CCAGAGATGG--AAACCCCAGCCAAGCACAGAGTGTGAGGCTTGGATGCCAAATGTTGGCCC-----------------AGACATAC-----TGGGTGGGAGCACTTGGCATG-GGGTCTGCAGCAGCCACCTGAGCTGGACAGCTGTGTGTAAAGGACAGACGGGCAGGGTTGG-------------GGCACACAGAGGATGAG-ATGGGGGCTT-GGGGGTCAGGGAGAGTCATATAAGAGTCT-----------------------------CACAGGTGGGAG------------------------------------------------AAGGGTCTTGCAGGAACCTCTGGCTTTGCCAGTGGCAGGGCCCAGGTATGCC--AGGGCAGGGCCTCAGCCCAGTGGTTGCCAAGGGCACCACCATGGGGCCCCAGGAG-----AGTTAC--ACTGTCAGAGTCCCAGGAGGACCCATGTGAAGGAGAGTCCCATGGCAAGGGTATTCTGGACTGGATGGCTCCTGCTGGC--------------------------------------TCTGGGCCAGGGAGGTGGAACCAC----CTCAAGGCAGCCCAGGCAGGAAGAGCCCTGACA----GTTGGGAGTG--ACT----------------GCCCTGTG-------------------CTGAGTGTCTTGGGGGAACTGTGGT---GTGGAGATGGCGTTCTAATGGCAAGGCCATTTCCTACTTGCTGCACAATG-------TGAGTGAGCCAGTG-----------GG---------------AGGCCAGAC---AGTGAGGAAGCAGGCAGATGTA----------------GGTCAGCAAGGCCCCTGGGGAAGGGGCGATGGGCAGTCTG-----------AGAAACTGGCAGT-----------------------TTGAGTCAGGCCCCTTTAC--------CCTCCTCTATCCCTGTAGACCCAGTTGGGGACTTGGAGCCCCCACTCTGCCTTGG--AGGGTCCCAAGAAAACAG-----GGGGAGGAAC-AGGGTGGGGCT--GTCCCTCCCTG-GA------CCAAGTCTGGG--------------------------------------GCACATCTCTCTCC------------------------------     
21 Leptonychotes_weddellii-NW_006383401.1-1280575_1280677  81.1%  27.2%    ----------CAAGATCC---TGA-------------GCCC------TGGAAGTCTCCA------GGGGG-CTTTGGGCCTGGCA--TATGGGTGACCT-CTGGACGCCAGGAGTGA----------------------------G-GGCTCGGGGCCCCATGCCCTTCAGGGCCCTGGCC------TTGTTCCTGCCTGGCAGAGCCCTCGAGGACTC----------------------------------TGGGGCCCGAGTG------------CCCTTTCC---TGTGCTGGATCTGGGATGGGCTGAGGGGCCAAAG--GACCGTCAGTCAAGCTGGGGGACAAGACTTCCCAGAAACAGAAAGGGGCCAGGCTTCAGTGCCCGGG--GTTAGCTCAGGCAGCCTGGGGCATGGAGGCT-----------GCAGGGCTGC-----------CTGGAG--------CCGGGAGGGGTCCTGAGCTGG-------------GAGGGTTTGTGCAGGGGGTG-G--------AAGGGCG--AGGTTGATCTCTGAGCAGGGCATGGCAGGGA--CCAGGC----------------TG------AGAGGCAGGAAGGGACACATTAGAGTCCT--CACGGGCCAGGAGAGACCCAGGGGTGCC--AGGAGCGGGCCTTAGCCTAGCAGTTGCCAAGGGCGCTGTCGCTGCCATGGGGCCTGGGAGAGAGCTGGGCTGCGGAGGCCCCTGG------------A------------------------------GGAGAGGGCGGGC-------------------------------------ACT--------------------------GCC---CTC---TGGGCCTGGGGAGGTGAAGCCACTGTACCCACTTGGGGTTC--CTC------------------TTTGTGCGCGGAACTGTCCCCTGTACTGGGTCCGAACGTGA-GGTGGGCAG--T--CGCTTCACAGTAGGGCAACTTCTTGTCCAGCTGAGCACCGAAGAAGA-----CAGAGAGG-------------------AT---GGAGAGAGA-------------GGG------GACAGGCAGATGGG--GTC--------------CCAGAGGCCCCTCGGTGGGGGGTAGTAGGGC--AGAGACAAGCAGACCAGGA-TCG---GGGTGCGGGGGAGGCCGAATGCGCTGTTTAGAGCTGACTCTGGCC--------TTGGAGGATCCCCAGGAGGGAGGGAT------GGGGGCAGCTG-TTCCCTCTCAGCCCCC----------CAGTCTGAGACCCCCCCCGCCCCTGCCAGGCACATGCACGCACCCAGGGAGCTGGAGAAGGGAGGTGGGCAGCCCCCCTCCCCGGG-------TAGGTGGG-CTGC-ATGCCT----G-----------------------------     
22 Cavia_porcellus-NT_176233.1-175168_175256               78.2%  23.6%    -----------CAGATGGTGAAG-------------CTCCG------GGGCAGCTCCAA------GGGCC-TGGTCCGCTTCTACTACCTGGACGAGCA-CCGCTCCTGTCT---------------------------------G-CGCTGGAGGCCC-----------------TCGAGG-----AAGAACGAGAAGG-CCAAGAGTGAGTGGTCAC----------------------TC-----------GGGGACCCGGGG---GCTCTGGGACCCAGGGA-----CACTGGGTCTGCAAGAAGACGGTGGCCCTGGG--TCACATGGTGGGGTGAAGGAGGCAAGAACCTTCAGAGAAAGACCCAGCTGGCCAC------------------ATTGGGATGGGCCTGGGTGCTGAGTGCTTCCCTGGGCAGCCATGGGGG-----------ACAACC-AGGGGGCCTGCAGGGGGCACTGAGCTGGATGGTATA-----GGGC---------------A-G--------GGGCAGA--TTGGGGGGATTGGAGCAGGCCCAGGCAGGGA--AAGTTCTGGCATGAAAT---TCTGG---CAGGCTGCAAGAAGGGCATTTCTAGCATCTTCTGGCTATGCCTGTGACAGGACCAGTGTCC--CAAGCAGGGCCCCAGCCCAACAGTTGCCCAGGGTGCTGCCACAG------GCCCCAGGAGAGGGCTGAGCTGCGGAGCCCAGGAGGCC------CGGA------------------------------GGAGG----------------------------------------------GT-------------------------CCCC---------ACGGCAGGTGCACTGGATAGGGCTCTGCTCACTGGGTGGCATTGGCCCGCTCATCTCATCTGTCTGCCCCAGAGTGACCATTCCCCGGACTGGGGGAGGTGGAGA-A-------G--CCCTAGTGCCCAGTCGAGGACCCTCGGGGAACTT-TGACACAGAACTGGT-----TTCCAGGG-------------------GC---AGGTTGTGG-------------GGCAG--GACATCAGTCCAGCTG--GGC--------------CCGGACAC--TCCTGAGGCCCAGTTTGGTGCCAGGAGCCCTCCCAGCCTTGG-GGGGCGTCCT-GTGGGGTGGCTTTTGTCTGGGCCAAATCTGGGCTCTGTGC--------TCCCCACTGCCACATGTGCCAGTGCT-------GAGGT-CC---CGGCTGGGGTCCAG--------------------------GCTGAGCCTGGAGAAGACCCTAGGCACATGGGAGGGGTCAGGGAAACATGTTTGGAGCACCTCTGGCTCATT-------CAC-----------CTGTGG----AGTTAGCTTTTAAAGGT-------------     
23 Sus_scrofa-NC_010448.4-172609_172727                    75.1%  27.0%    ------------------------------------AGCAGCCCCTGGGGTGCCGAAGGGG--------C-AGTGAGACCTGGGGCCCTGGAAG-----------TCTCCAGGTG------------------GCTCTGGCTTGGC--ACGTGCACTCAGCTGGCCTTGGAGATTGGTGGTGATCTCTGGACGCCGTGGG-GAGAGACCCCTGG------CCCTGT---TGCCCACCTAGCAGAGCCC--C-CTGGACTGGGGGC------GACTGTGCCAGATGCTGG--GGCTAAAGGACCTCCAGTCTCGAGGGAGATAAGTCCTCTCAGGAGCACAGAGGGAGGCC-------CCGCTGGGGGCCCTGAGGGCAGGACAGCCCAGGAG-CCTGGCTGTGGAGGCTGCAGGGCTGCCTGGATG--------GGGCTGGGGGG---CGGCCGTGAACTTGGAGGATTAGTGCAGGGGCCGGG--CTGGGGCTT-GAGTGTCAGGAAGAGATG-----------------------------------------------TGGGTCCT--------------------------------------------TATAGGCGGGAGGGGCCCTCTGTCTTTGCCGACTGGAGAGACCCAGGTGTGCC--AGGGCAGGGCCTCAGCCCAGCGGTTGCTGAGGGCACTGCTGCCACTGCGGGGCCCAGGAGACAGCCACTCCGTGCAGCCCCCTGGG-----------------------------AGGGTGTCTTGGAGGAGGGGCCT-----GGGGCCCCCCTGTG----------------------------------------------------------GGCCCCGCACAGTGAGGCGGGAGCCCCTGTGCTCCCCCGGGAGCA--CCT----------------GCTCTGTGCCGGGCGCTGTTCCCGGCACTGGGCGTCCTTTGGGAACTTCGCTGACATGAGGCTGGTCCTCGCGTGTGAGGTGGGTGAC-ACCGCTCAACAGG----------AGGATCATGCTG-------------AGTGACAAGCGAAACACAGAGCAGCC-AAGAGCAGGGAGCAGGTGGGTGGGGGTC--------------ACAGAAGCCCCTCTGGGGAAGGAGTGACAGGCCAGCAGGTGGGTGGGGTCTCCC----------------------CCTAATCTGAGCTCCCCGCCATGAACGC--------TCGTGTGCTCAAGGGTGGAGAG-----GGTGGGCAGG--GCAGGCCCTTGGGTCGGGAGGCTCACTTTGGTGGGG-----GGTGCCCAAA-GGGAGAGGGAG-CAGACCAGGGTCGGAGCAG-----AGAGGGGAGGGGCTCAC-------------------------------------------------------------------------     
24 Otolemur_garnettii-NW_003852462.1-170679_170792         74.0%  25.3%    ----------------CCTGCATCCGCTGGCGGCCCTCCCGCAAGAACGAGAAGGCCAAGAGTGAGTGGCTGCCCTGGCAGGGGCAGGCCCAATGCCCCAGGGAGC-ACACAGGGGCAGGTGTCCCTCCCAG-CAGCTGCC-------------------------ATGT--GGCTCTGAGCCCCCGTGGACCATGGGGA-GGG---G-CCGTG------CC--CACCCAGCAGACCTCCCTGGGACT--TGGTGGGCACAGAGC--------------------ATCA--CCAGTGCCCAGCCCTGGTCTGGGTGTGCAGTTG-------GGATGAGGAC------------------AGAGGGCAGTCAGGCAGGAAGGGACCCCAGCAA-GCTATATCAAGGAAGGGCTGGGCTGGCAGCTTTGGCTC--------------------------AGTCCCTCAGAGTGTGAAGGCTCAACGTGAGCTGGAAG-GCTTTGTGCCTGAGGTGGGCTGTGGGTTC-T---------------------------GGGGTTGTGGGGAGG--------------------------------------------GGCGTTTTCAGGACCTTCTCTGGCTTTGCTAGTGGGCAGGACCCAGCTGTGCC--AGGGAAGGGCCTCAGCCCAGTGGTTATCTGGGGTGCAGCCCCATGGGTCCAGGAG-------ACCCTTGCCTCAGAGCCCCCAGGAGGGTCTGTATATAGAAGGGCCCCAGGGCCAGGATATCCTGGAGTAGGTGGAGCCC--CTGACCCCAGGAGGCAATGTGGGGTCAATGCCGGGACTGCCCTCCGGGCCAGGGCAGAGAAGCCAGTTTGATTGAGGCTGTGCAGGTAGGAGGAGCCCCAGCACCC-AGCAGGAGCA--GCT----------------GCTCTGAGCCAGGCACTGTTCCCTGTGCTCAGGGCTG-CCCAGCACACTGAGGTCTCCCC---------CTGCCT-CCTTGGAGGCTGTTCCACCCAAGACA----------------------------------------------------------------------GGAGCAGGATGGAGGGAGCCAGGGTCGACACAGCATCAGGGAAGCCC-----------------CTGGGGACT-TGCAGG--------GGGGGACA----------TGGGACAGAGA--GGCCCTTTTGCCTCTGCCC--------ACCCAAGCACGCAGGGAGATCCAGCTGGGTGGCTAAA--GCCCACCCTGGACTTGG-AGAGGTCCTCTGGTAGAT-----CCTGCCACAG-GCGGAGCA-------------------------------------------------------------------------------CAGATCT--------------------------------     
25 Marmota_flaviventris-NW_023144724.1-171032_171091       72.7%  25.0%    ----------------------------------------------------------------------ACA------------------------------------------------------------GA-------------CCAGGGGTAGGTGTGGCTTTGCTGAAGGGCAGTATCCAGGTGTGCCAGGGAA-GGGCCTCAGTCTA-----GTGGTCGCCAAGCACACCACCACAGAGCCCCAGGGGGGAACATGGT------GAGGATGTC---------------------------CTGGATTGATGGCTCCT-CCAGACCCCTGGGTCCTGGGAGGTGGAGCCTCCCTAAGGCTGCTCAGACAGGAGAAGCCCC---AGC-GGTCAGGGATGTCCACTCTGTGCTGGGCACTGTTCCT---GGCACTGGG---------------CTTCCTGTGGGAACTGAGGCGTGGAGC--TGGTGTGGT-CATGGTGAGGTGGGCCTTGGCTCACCGTACCGACCACTGAGAAACCCAGGAGGAGCGGGGGAGCAGGCAGACGCAGGCCAGGGAGACTGCCGGGGAGCAGCGGGGGCAGAAACCAGCAGCCTGGGCTGGGGCCCCGCCAGCCTCCCCTACCCCGGAGACCCAGCTGGTGC-------------TTGGAGCCCCCCTGGCCATGAAAGCCTCCCAGTGGGGCAGGAGC-----------------------AGC----------------------------ATGGGCCAGCTGTCCTCTGAACCAGTCTC--------CCGCCACATGCCAGGGATAGAGAAAGGC----------CAGCGGGCA----------------------GCGGGTGGCG---GGGGCAGCAGCTGTGCTGAGCCCGGGGTGCCT--GGT----------------GCTCAGAGGGGCTGCCTG----TGCCCTGCACATCTG--GGAGGGTCCTGCTGACACCTGACAGGACCTGAGCCACGCGGCTTCCCTCTGCACCACTCCACACCT---G---CCAGGACTTGTCACAGAGGCAGCTGCGGGACTGAAAAGGAGCTGACCTGAGCTGGACGGGTGGACGGGCTCCTGGGAGTC---------CCGAGTCGGCCAGGCGCCTCTCAGGAGGGAGGAGGGGCTGCGGGGTCAGAGCCGAGCCGCCGGGGGTC---CTCAT-----------------------ACTCCTG----------------AAAAGGCTGGGGGCCCC--CGCAGGCG--------------------------------------CGGAG-----GTCAGAGCCC-CAT---------GGTGTTCAGGCAAGAGATGCCTGGCCCCTGGGAGGCCCTGACCAGCCCTC------CCCACCACCCGCAGTCTCCATCGACTCCATCC--------------------------     
   clustal                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           .  .                                                                                              .                                                                                                                                                         .                                                                            .           .                                                        .