Reference sequence (1): Target
Identities normalised by aligned length.
Colored by: consensus/70%

                                                          cov    pid  1 [        .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .         .         :         .         .         .         .         5         .         .         .         .         :         .         .         .         .         6         .         .         .         .         :         .         .         .         .         7         .         .         .         .         :         .         .         .         .         8         .         .         .         .         :         .         .         .         .         9         .         .         .         .         :         .         .         .         .         0         .         .         .         .         :         .         .         .         .         1         .         .         .         .         :         .         .         .         .         2         .         .         .         .         :         .         .         .         .         3         .         .         .         .         :         .         .         .         .         4         .         .         .   ] 1434
 1 Target                                              100.0% 100.0%    ---------------------------------------------------------------------------------------------------------AGCCAACCCGCCTCCCCTTCTGGCCTCTCAGCGGAGCCAGCTCAGCTCCCGCCAGAGACCCC----AGCCCAG---GTGTCCTCCCTTCCC-ACTCCAGCAGAGGCTGCTGGGCCCGGGCTGGGCAG-CCAAGGGTTA-AGTGGGCGGGGCTCCCACGGGAGGGGCGGTCCCAGCG-GCGGCCCCGTCCCGCCTTCCCCTCGC--CTTCCTCACCTT----------------------------CCTCACGGGCGGGCGCGGCAGGGCAGCGTGTG-GGGCTGCGATCGGCATGGGCTC----TGCGCGCGGGGTGCCCCTGCTCGGGCTGGGGCTCAGGGGACGCCGGGGGCCAGCACAGGGCCCGGTGTCCCTCGGGCCGTGCCGGTAAC--TGGGATTGGCACCCGCCGGCCATGGAAGAGCCTGGGCCCCCAGGTGGGCTCAGCCAAGACCAAGGTAAGGGGGCAGGTGGGATCCCAGAAGG--GGG-TTGTGATGGTCCCCGTAGGGAGC----CCAGGACCGGACCTGTTCACTGGTGACCCGCCCAGGACCGGACCTGTTCACTGGTGACCCACTGACCCCCCGTGGGCAGTGCAGAGCTCCTCCCAGCAGGGTCTCCGGGAGCACGGCCCAATGACCCCATTAC--------CTGCAC-ATCCCTCAGACTCGGTCCCAGAGGA------GGGATGCTGCCCCCACCCCTTG-GCGCCCCCACCCTGCCTCATCTGCCCCTGTGCTGACACGTGAAA-GCGAGAGGGTCTG----------------------------------------------------------------------------------------------------------------CTCCCTGCAAAGGGTCCAACACAGTCCAGGTGGGCGGTGGGGGAGGCGCCC-TCAGCCATGCCAGCACGG-GTCCTG-ACC----TCCAGCTTGATCCCAGCGGATGCACACTGCTCGGGTGGGGGGCAGGTCTGGGGGTGCCAGGGGCTGGTAGGCTCTGG--CTTTTGGCTCTGGGGGCTCTCCTGGCCCAACCCCACCCCAGCCCCT-GATCGAGGTTGGCAAAGGTGGCCCTGAGC----TGCAGTCAGCACCATGGACAGGGGCAGCTGCTGCTTTCTCTGGGGGGC-CTGCAGT---TGCTGTG-------------------------------------------------------------------------------------------------------------------------------     
 2 Aotus_nancymaae-NW_018508829.1-94377_95320           94.1%  74.8%    -------------------------------------------------TATG----------------------------GGAATAGCCAGCAGCCGAGCCAGCGGCCAACCCGCCTCCCCTTCTGGCCTCTGAGTGGAGCCAGCTCCTCGCCCACCAGAGACCCA----GGCCCAG---GTGCGCCGCCTGCCTCCACCCAGCAGAGGCCTCTGGGCCCGGGACGGGCAA-CCAAGGGTTA-AGTGGGCGGGGCTCTGCAGG-AGGGGCGGTCCCGGCG-GCGGCCCCGCCCCACCCTCCCCTCGC--CTTCC------------------------------------------TCACGGGCGGGCGAGGCAGCTTGTG-GGGCTGCGGTCGGCATGGGCAG----TGCGCGCGGGCTGCCCCTGCTTGGGCTGGGGCTCAGGGGACACCGGGGGCCAGCGCGGGGCCCGGGGCCCCTCGGGCCGTGCCGGTAAC--TGAGATTGGCGCCCACCAGCCATGGAAGAGCCTGGGTCCCCGGGCGGGCTCAGCCAGGACCAAGGTAAGGGGGCAGGTGGGGTCCCAGGAAG--GGAGCTGTGATGGGCCCCGCGGGG-----------------------------------AGCCCAGGGCCGGAGCTGTTCGCTGGTGACCCGCTGACCCTTCGTGGGCAGTGCATGGCCCCTCCCAGCAGGGTCTCCAGGAGCGCGGCCCAATGACCCCATTAC--------CTGTAC-ATCCCTCCGACGAGGTCCCAGAGGA------GGGGTGTTGCCCCCCGG--------CGCCCCACCCTGCCTCATCTGCCCCTGTGCCGACACCTCTCT-GCGCGAGGGTCCG----------------------------------------------------------------------------------------------------------------CTCCCTGCAAGGGGGCCACGC-AGTCCAGGTGGG-CGGTGGGGAGGCGCCC-TCAGCCACGCTGACACGG-GTCCTG-ACC----TGCAGCCTGGCCCCAGCAGATGTGCACTGCCTGCGGCGGG--CAGGTATCAGGGTGCCAGGGGCTGGTGGGCTCTGGCCTTTGAGGCTCTGGGGGCTGTCCTGGCCCAACCCCACCCCGGCCCCT-CATCCAGGTCAGCAGAGGTGGCCCTGAGC----TCCGGTCAGCACCATGGACAGGGCAGTT-GCTGCTTTCTCTGAGGGCC-AGT-AAT---TGCTGTG----CGTCCTCAGGG-TTCCCT-----------------------------------------------GGA-------GTCACAA-----------------------------------------     
 3 Carlito_syrichta-NW_007256000.1-127363_128073        87.2%  51.9%    ---------------------------------------CCTGAGGGGGCATGAGAGCAGGACGGGTGGTGGGCGGGCACTGGAGCCACTGAGGGAGGAGCCAGCGACAGGGCTGCCTTCCCTTCTGGCCTCCGAGTGAAGCCAGCACAGTGC-----------------------------------------CTGCCGCCCACAGTGGCCACTAAGCT-GAGCTGGGCAG-CAATGGGTTAAGGTGGGTGGGACTCCTGCAGGAGGGGCGGGCCAGCGG-CAGGCCTGGTCCCGCCTTCCC----------------------------------------------------------TTGGGGCGGTGGCAGCGCGTGCGGCTGGAATCGGGCATGGGCAC----CTCGCGCAGGGCGCCCCGGCTTGGGCTGAGGCTCAGGGAATGTGCGGGGCCAGCACGGGGCCCGGGGCCCCTTGGGCTGTGCCAGTAAC--TGGGGTTGGCCCCCGAGGGCCATGGATGAGCCCGGGTCCCCCAGCGGGCTCAGCCGGGACCAAGGTAAGGGGACAGGAGGGACCCAGGAAGG--GGG-CCGTGACAGTCCCTTTGAGGAGC----CTGGGACCAGAGCTGTTCACTGGGGCCCCACTGATCCCTTGTGGCAATTCCTGCTCCTGCCCC--------------------------CTCCCTGCATGGTCTCC-GGAGCTTGGCCCAATGACCCCATTCCCCACCGGCTGGTCC-CTCACTCAGACTTGGTGCCCAGAGG------GGGATGCGCCCCCTCCCTACTC-CAC-----------CCCCATCACCTCCCGTACTGGCATCTCACA----GAGAGGTCTG----------------------------------------------------------------------------------------------------------------CCCCCTGCAAAGGGTCCAGAC--ATCAAGGAGGGCGGTGGGAGGAGATGCC-CCAGCCATACTGACACGG-TCACTG-ACC----TCAGCCC----CCCAGCAGTGGACACTGACCGCCTGCAGGGGCAGGTCCGAGGGTCCCGGGGGCTGGTGGGCCCTAGCCTTTGCGGGTCTGGGGGATCTCTCCGTCCAGCCTTGCTGGCCCACAC-C--------------GAGGGCAGGTCCGC----TTCGGTCAGCACCATGGACAGGGCTGCCTGTTTCCTGGAGCC----TG-CCTGGCT---TTTCTCA----CATCCTCAGGG-CTCCTG-----------------------------------------------AGTCAACGCTGTGGCTAGCCTGGCCGGCCCTG--------------------------     
 4 Lemur_catta-NC_059130.1-160969_161720                84.5%  46.5%    --------------------------TGAAGGAGGGCCGGCCTGCAGGGAGGGAGGGCAGGATGGACGGTGGGTGGTCTTTGGAGCCGCTGTGGGAGGAGCGAGCGCGTGC----CCTCCCCTTCTGGGGCTGGCTCCGTGC-----------CCATCCCAGACCCC----TGCCCTC---CTGCCGC-----CTGCCA-CGCACGGCGGACCCTGGGCCCGAGCTGGGCAGCCGAGGGTTAAGGGTGGGTGGGGCTCCCCTCGGGCGGGGC-----GGGC-CCAGCAGCGCCTCGCCCCGCC-------CTCCC------------------------------------CTGCCCTTCTTTGCAGGCGACGGCGGCGGCACAGCTTGGGTCCGGCATGGGCAC----CGTGCACCGGGTGTCCTGGCTCAGGTTGGGGCTCAGGGGACCCAAGGGGCCAGCGTGGGGCCCAGGCCCCCTCGGGCCGTGCCAGTAAC--TGGGGTTGGTGCCTGCGGGCCATGGAAGAGCCTGGGCCCCCCAGTGGGCTCAGCCAGGACCAAGGTAAGGGGGCAGGAGGGACCCTGTGCAG--GAGC-TGTGGCCATCCCAGCTGGGAGC----CCAGGGCTAGAGCTGTTCACTGTGACCCC-----TGACCCCTCC--ACAG--------------------------CAGCATGTGCCCCCTCCCTGCAGGGGCTCCAGGAGTGCGGCCCTGTGGCCCACTCCCCACCAGCAGCTGCA-CACTCCTCGCCCCCACCC-------------------------------------------------GCATCGGCTGCCCCTGTGCTGACATTGCAGA-G--------------------------------------------------------------------------------------------------------------------------------------GGGCTCCAGGCAGTCCTGGTGGGCGGCTGGAGGAGGTGGCT-CCAGCCATGCCGACACGG-TCCCTG-ATT----GCCC--------CGAGCAGATACCACTGCCT-----AGAGGGGCAATTCTGGGGGTGTTGGGGCTGGTGGGCTCTGGCCTTCGGGGCCCCGGGGCTGTTCTGGCCCAGCCCCACCCCGCCTCTCT-CAGCCAG-GCGGTGGAGGCGGCCCTGGGC----TTCGGTCAGCACCACGGACAGGGCAGCCGCCTTCCCTCC----CAGGGCTTGCCGTTGTTTGCTGG----GGTTCCGGCGTCAAAGGCTGCCGCGCCGGCACTGGCACCTGGGGTTGGAGAGTTGCT------------------------------------------------------------------     
 5 Microcebus_murinus-NC_033661.1-159908_160663         81.5%  43.7%    CACCCCTGGGAGCTGCAGGACTCCTCTGAAGGAGGGGCTGGCCAGGAGAGGGGAGGGCAGGACGGACGGTGGGTGGTCTTTGCAGCCGCTGTGGGCAGAGCGAGCGCCGTGC---CCTCCCCTGCTGACCTCTGC---------------------------------------CCTC---TTGCTGC-----C-TCCTGCGCAAAGCTGCTGGCCGGCCCGAGCTGGGCAGCCGAGGGTTAAGGGTGGGTGGGGCTCC-CTTGGGCGGGGC-----GGGC-CCAGCGGCGCCTTGCCCCGCC-------CTCCC------------------------------------CTGCCCTTCTTTGCAGGCGGCG---GCGGTGAGGCTTGGGTCGGGCATGGGCGC----CGTGTGCAGGGTGCCCTGGCTCAGGCTGGGACTCAGGGGGAGCAAGGGGCCAGCGCGGGGCCCAGGCCCCCTCGGGCCGTGCCGGTAGC--TGGGGCTGGTGCCCGCGGGCCATGGAAGAGCCCGGGCCCCCCAGCGGGCTCAGCCAGGACCAAGGTAAGGGGCAGGAGGGCCCCTGTGCA----GGAG-TGTGGCCGTCCCAGCAGGGAGC----CCAGGGCCAGGGCTGTTCACTGTGACCCC-----TGACCCCTCA--GAGG--------------------------CAGCACGTGGCCCCTCCCTGCAGGGTCTCCAGGAGCTCAGCCCTGTGCCCCCCTCCCCACCAACAGCTGCA-CACCCCTCGCCCCCCACC------------------------------------------------CGCGTCGGCTGCCCACATGCTGACATTGCAGA-G--------------------------------------------------------------------------------------------------------------------------------------GGGGTCCAGGCAGTCCAGGTGGGAGGCTGGAGGAGGTGGCC-CCAGCCGTGCCAACAGGG-CCCCTG-ACT----GCCCGCCTGCCCCCAGCAGATACCACTGCCTG----GAGGGGGCAGTTCTGGGCGTGTTGGGGCTGGTGGGCTCTGGCCTTTGGGGCCCTGCGGCTGTTCCGGTCCAACCCCACCCCGCCCCTCT-CAGCCAG-GGCAGTGGAGTGG-------C----TTCGGTCAGCACCATGGACAGGGCAGCTGCCCTTACTCC----CAGGGCCG----CTGTTTGCTGG----GGTTCCCAAGTAAAGGCT-GCCGGCCTGGGGTTGGAGAGTTCCTGCCACACTTTCCTGCCTG-------------------------------------------------------------     
 6 Propithecus_coquereli-NW_012152752.1-162775_163527   85.3%  45.4%    ------------------------------GGAGGGGCTGGCCTGGAGAGAGCGGGGCAGGATGGACGGCGGGTGGTCTTTGGAGCCGCAGTGGGAGGAGCGAGTGCCGTGC---CCTCTCCTTCTGGAGCTAGCTCGGTGC-----------CCAC-CCAGACTCC----TGCCCTC---TTGCCGC-----CTCCCTGCACAGCGGCCAGCTGGGCCCCGAGCTGGGCAGCCGAGGGTTAAGGGTGGGTGGGGCTTC-CTTGGGCGGGGC-----GGGC-CCAGCGGCGCCTCGCCCCGCC-------CTCCC------------------------------------CTGCCCTTCTTTGCAGGCGGCAGCAGCAGCGCGCCTTAGGTCGGGCATGGGCAC----CGTGTTCGGGTTGCCCTGGCTCAGGCTGGGGCTCAGGGGGTGCAAGGGGCCAGAGCGTGGCCCAGGCCCCCTCGGGCCGTGCCGGTAAC--TGGGGCTGGTGCCCGCGGGCCATGGAAGAGCCCGGGCCCCCCAGCGGGCTCAGCCAGGACCAAGGTAAGGGGGCAGGAGGGACCCTGTGTGG--AG---CTCTGGCGTCCCAGCTGGGAGC----CCAGGGCCAGGGCTGTTCACTGTGACCCC-----TGACCCCTCA--CAGG--------------------------CAGCACGTGCCCCCTCCCTGCAGGGTCTCCAGGAGTGCGGCGCTGTGGCCCCCTCCCCACCAACAGCTGCC-CACCCCTCGCCCCCCACC------------------------------------------------CGTATCAGCTGCCTGCATGCTGACGTTGCAGA----------------------------------------------------------------------------------------------------------------------------------------GGGGACCAGGCAGTTCAGGTGGGCGGCTGGAGGAGGTGGCT-CCAGCTGTGCCAACATGG-TCCCTG-ACT----GCCCACCTGCCCCCAGTGGATACCACTGCCTG----GAGGGGGCAGTTCTGGGGGTGTTGGGGTTGGTGGGCTCTGGCCTTTGGGGCGCTGGGGCTATTCTGGTCCAACCCCACCCCGCCCCTCT-CAGCCAG-GGCGGTGGAGGCGGCCCTGGC----TTCGGTCAGCACCACGGACAGGGCGGCCGCCTTTCCTCC----CAGGGCTCGCTGCTGTTTGCTAG----GGCTCCGGAGTCGAAGGCTGCTGGCGCCCGGT-----ACTGGGGTTGGAGAGTTCCTGC----------------------------------------------------------------     
 7 Tupaia_chinensis-NW_006198262.1-166852_167750        89.8%  50.3%    --------------------------------------------------------------TGGAGGGTGAGTGACTGCCGGAGCTGCTGTGAGAGGGGCAGTGGCTGGTGCTGCCTCCTCTGCTGGCCTCTGGGCAGGGCCTGCTCAGGCCCCACCTGAGATTCC----TGCCTGG---GTGCACAGTTTCCCACCCACAGCGCGGAGGTGGTCCTGGGAGCCAGGCAGC-CGAGGGTTAAGAATGGGCGCGGCTCCCCTGAGAGGGGCGGTCCCAGTG-GCAGCAGCGTTGGCCTGGCCCCGCCC--CTTCTCTCTCCT----------------------------CCCTTGAGCAGAAGCAGCAGCGTGCAGGCGGCGGGCTTTGACCGGGCATGGGCAC----CTTGCGCGGGACGCCCCGGCTTCGAGTGGGATTCAGGGGACACTGGGGGCCAGTGCAGGGCCCAGGCCCCCTTGGGCCGTGCCGGTAACAGTAGGGTTGGCGCCTGCCGGCCATGGAAGAGCCTGGGCCCCCCGGGGAGCTCAGCCGAGACCAAGGTAAGTGGGACAGGCGGGGGCCTGAAGAAGGGGGCTATGACCATCCCTGTGGGGAGT----CCAGGGCCAGAGTTGTCCATTGGTGACCCACTGGCCCTTTGTCAATGGCC------------------------------ACTGATCCCCTCCCTGTAGTGTCTCTGGGAGCGTAGTCTGATGACCCCATTCCCACCAACACCTGCA-----------------------------------------------------C-TCCCCTCCTCTCCCCATCATCATCTCCTGTGCTGGCATCTTGAA-GGGAGAGGGCCTG----------------------------------------------------------------------------------------------------------------CTTACTGAACAGGGTTCAGACAGTCCTGGCGGGCGACCAGAGGAGGTGCTC-CCGACCATGCCAGCATAG-TCCTCTGCCC----TCCAGTCT-GCCTTGGCGGACACCCGCTGCCTGC--AGGCAGCAGGTCTGGGGGATATAGGGG-------------ACTGCTGGGGCAATGGGGATTTTCCTGGTCCAACACCACCTCAGCCAGG-A--------TGGT--GGAGGCGTCCTGAG----CTCGGTCAGCACCATGGACAGGGCAGCTGCTGCTCTCCTGAGGTGTCTGCTGTCAT---TTGCTGA----GGTCCTGAAGG-TTCCTT-----------------------------------------------GGAATCAA--------AGGCTGGCTCGCCC----------------------------     
 8 Otolemur_garnettii-NW_003852462.1-159966_160407      86.8%  47.9%    ----------------------------------------------------------------------------------------CTATGGGAGGAGCGGGCGCTGTGC---TGCTCCGCTCTGGCCTCCCAGCTGAGCTAGTG------TTGCCCCAGACCCC----TGCCGGG---GT----------GCGCTGCCTCCCACTCTCTGCAGCCCACGGGCCGAGCAGCCGAGGGTTAAGGGTGGGCGGGGCTCCTGCGCGGGGGGGGGGGGCGGTC-CCGGCTGCGCCTTGCCCCGCC-------CCTCG------------------------------------CC--CTCCCTCGCGGGCGGCGGCGCAACGCGCGGCTTGGGTCGGGCATGGGCAC----CGTGTGCGGGGTGTCCCGGCTCGGGCTGGGGCTCGGGGGGCGTGCGGGGCCAGCGCAGGACCCAGGCCCCCTCGGGCCGTGCCGGTAAC--TGGGGCCGGCGCCCGCGGGCCATGGAAGAGTCTGAGCCCCACGGCGGGCTCAGCCAGGACCAAGGTAAGGGGGCAGGAGGGACCCTGGACAG--TGCACTGTGACCATACCAGTCAGGAGC----CTAGGGCCAGAGCTGTTCACTTCCTTTCCATCCCTGACCCTTTGCAGGCA--------------------------GAGCATTGCTCCCCTTCCTGCAGGAGCTCCAGGAACGTGCCCCTGTGGCCCACTCCCTGCCACCAGCTGCC-CACCCCTTGACCCCACCC-------------------------------------------------ACATAAGCTGCTCAGGTCCTCACATCTT--G-A--------------------------------------------------------------------------------------------------------------------------------------AGGGTCCAGATAGTCCAGGTTGGCAGCGGGAGGAGGTGGCTCCCAGCCATACCAAAACAG-CTCCTG-ATT----GCCAGCCTGCCCTCAGCGAATACCCACTGCCT----GGAGGAGG--CATTGGGAGTATTGGGGCTGTTTGGCTATGATCCCTGGGCTCTAGGGTGCTTCTGGCCCCAGCCCCACCTTGCCCCTCC-TATTCAGGTTGGGGGATGTGGCCCCGGGC----TTCATTCAGCACCATGGACAGGGCAAGTACCGGCTTTTCCCCAGGGACTGCCCCGTTGTTTGCTAA----GGTTCCCTGGAGTGGAATGGGCCGGCCCGCCTGGCAACCCTGGATTGGAGATGTTCTCATGTCTGCCACACTTTTCTGACTGGGAAGCCAGGAATT---------------------------     
 9 Chinchilla_lanigera-NW_004955486.1-162994_163328     81.1%  33.5%    ----------------------------------------------------------------------------------------------------------G-TGGAGAGGCATCCG--CTGGCGTCTCCCC-TCCCCGTCTCTGAGCGCTGG-CTTGGTGCCCGCCTGGACCCCTCCCTGGCTCA---GATGTGCCCACTGCAGCCAGGCAGCAGGAGCAGGGCTGCCAAGGGTTAAGGGCGGGCGGGGCTCCCGCGGGAGGGGCGGTCCCCGCG-GCTGTAGCTCCTCCCGCCCTCCCCTCCCCACTCTCCC-----------------------TTCGCG------GGCGGTGGCAGCCGCGGCGGGCAGCAGCGGGCTTTGAACCGGCATGGGCGC----TGAGCGTGGGGCGCCCCGGCTCAGGCTGGGGCTTGGGGGACCCTGGAGACCCGCACAGGGTCCTGGCCCCCTGGGGCCGTGCTGGTAA--CTAGGGTTGGTGCCCGGGGGCCATGGAAGAGCCTGGGCCCCCCAGCGGGCTCAGCCAAGACCAAGGTAAGGGGGTGGGAGGGTCCGGAGAAGGGGACTGCGCCCCAGAGGTGGGGACCCTGGGG--CCAGAG------CTGTGCGTAGGTCCAAGGCA---------------GT---GCGCAGC---------------------------CCCTCCT-------------------GGAGGGCAGTGACCCCGTTCCCACCCGCTGCCACAGCG----------GCTCACCCCGTCCTGCCCTGGGCTGGCTCCTTGCAGTGAAAGACCAC--TGCCGAGGGCACAGGAGTCCTGGGGACGGCGGGAGGAAGCGACCCCGGCCT-TGTTCACATCTTCCAGGCTCCCAGCTGCCCTGG-GATGCCGCTGCCTGAGGGGCAGGTCTAGGGGTGTGGGGCACGGTCTCTAACTGTGGGACTCCAGGGTTCTCCTGGCCTGACTTCAATGCTCTGGCCCTGGCCCCGGTCAGCACCATGGACAGGGCAGCCTCCTTCCCTCCCAGGAGCTGTTGTTTGCC----------------------------------------------------------------------------------------ATGACCCTTGAGGTTCTAGCTCAGCTCTGCCCCACTTTCCT-GA------CCTGGC-AGCGGGGCAGTGCA----CTGGGCAGGTGGGCGTCATGAACAGCTGGGGTGCAGGCAC-CGAGGCTGCTTGGGGCATGGGGATGCTGTCCACAGGGCATCTGCGCGGGCACCTTC------------------------------------------------------------------------------------------------     
10 Cavia_porcellus-NT_176233.1-166638_166965            79.2%  30.9%    ---------------------------------------------------------------------------------------------------------GG-GGGGTGGGTGTCCC--C---CTCCCTCCC-CCACAGCCTCTGAGCTGCAGTCTGGGTGCCGCCTGGGACCCCTTCCGGGCTTTTGCAGGTTCGCCCACAGCAGCTGGCAGCAGAAACAGGGCCGCCAAGGGTTAAGGACAGGCGGGGCTCCCGCGGGAGGGGCGGTCCCCGGG-CCTCGGCTCCTC---CCCTTCCCCTCCCCGCTCTGCC-----------------------TTCGCG------GGCG-GTGGTGGAACGGCGGGCAGCAGCGGGCTTTGAACCGGCATGGGCTC----TGAGCGCCAGGCGCCCCGGCTCAGGCTGGGGTTTGGGGGACGCTGGGGTCCGGAACAGGGTCCTGGCCCCCTGGGGCCGTGCTGGTAA--CTGGA-TTGGTGCCCAGGGGCCATGGAAGAGCCTGGCCCCCCCGGTGGGCTCAGCCAGGACCAAGGTAAGGGAGCAGGAGGGTCCCGAGAAGGGGGCTACGCCCCCGAGGTGGGGACCTTGGGG--CCAGAG------CTGTGCATAGAGCTGTTAAG---------------GGCAGTGCGTGT---------------------------CCCCTCC-------------------CGAGGGCAGTGACCCCATTCCTACCCACTGCCACAGCT----------GCTCAGCCCCTCCGGCCCTGGGCTGGCACCTTGCCGTGAGAGACCAT--GCAGAGGG-CACAAGAGTCCCGGGGACAGCATGA---------------------CCGAGCCTTCCTGACTCCCAGCTGCCCCAG-GGGATGCCAGTGCCTGTGGGCAGTCTAGAGGTGCAGGGCATGGACTCTGACTCTGGGGCTCCAGGGTTCTCCTGGCCTGACCCCGAAACCCTGGCTCTGGCTCCGGTCAGCACCATGGACAGGGCAGCCACCTCCCTCTCTGGGAGCTGTCCTCTGTT----------------------------------------------------------------------------------------GTGGCCCTCCAGGTTCTGGTTCAGCTCTGCCCCACTTTCCT-GA------CCTGGG-AGGAGCCATGCACT----GGGT--GGGCAGGCAGTAG-GACAGCTGGGGTTCAGGCACCAGGGGCTGCTCGGGGTGTGAGGGGACTGTTCACA-GGCATGTGTGCGGGCACCTTCTTCCCTGGGTGAGCAGAGCTTCT-------------------------------------------------------------------------     
11 Castor_canadensis-NW_017871110.1-155132_155560       77.5%  34.1%    ---------------------------------------------------------------------------------------------------------------GCTGCCTCCCCTTCTGGCCTCTGAGTGGAGCTGGCTCAGTGCCCATCTGAGACACC----CCTCTCTGATTTGCATGGC-CTCCCACCCAGAGCAGCCTCGGTGGGTCAGGAGCCGGGCAGCCAAGGGTTAAGGGGGGGCGGGGCTCCCGTGGGAGGGGCGGTCCCAATG-GTGGCTGCTCTGCCTCAGCCCGCCCCTCCC-CTCCCTCCCTCTCTT-------TCTT-----------------CGCTGGCTGGCGGCAGTAGCAGCAGCAGGCTTTGAACAGGCATGGGCGC----TGTGCGCGGGGCACCCTGGCTCTGGCTGGGGTTTGGGGGACACTGGGGGTCAGCGTGGGGCCCCAGCTACCTCGAGCCGTGCCGATAACAGTGGGGCTGGTGCCTGTGGGCCATGGAAGAGCCTGGGCCCCCCGGTGGGCTCAGCCGGGACCAAGGTAAGGGGGACAGGAAGGTTTCTGGAAACCTGTGCATTGATGGCCCACT----GGCTG---TCAGAGG----------------------------------------GCAGTGCTTGAC--------------------------CCCTTCCCCTAGGG--TCTCTGGCAGCACAACTCCCTTACCCCATTCTATAACTGCTGCACAGCCCCT----------CTCCCCTTTCTGCCCTCT-GCACTAGCGACACACTGAGAGATG--CCACAGAGG---TCCTGGTGGGTGG---TGGGAGG--TGGTGA-----CCTTAGCTCTGCAGCCCCAGGGAACACCCATTGCCCAGAGGAGACAGAAGCTGTTGG--------------GG-------GCTGT---GGGCTCTGGCCCACGAGTCTCTGGAGTTCTCCATAAGGAGCCCGTGCCCTGCTTTGGTCAGCACCATGGACAGGGCAGCTGTTTTCCCTCCAGGGGCCTGCATT------------------------------------------------------------------------------------------------GTTTGCTTAGTGTCTTCAGGGTTCTGCCCCACTTTCCT-GA------CCTGTG-AGCCAGGCTTTGCC----CTGGGCAGGCAGCATGGAGTC------------CCCTGAGGCTGACTGGGGCTGCT------GG--------------GGTGTGAGAAGGGACTGTTATCAGGGCTTCCTGAATTGGTACCTTTCATGCTGTGCAGGACAGAGCTTCTCCCAGACAGGGTCTCTGTCTGCC----------------------     
12 Marmota_flaviventris-NW_023144724.1-159180_159611    80.1%  34.4%    --------------------------------------------------------------------------------------------------A------GCCGGCTCCACCTCCCCTTCTGGCCTCTGAGCCAGCTGG-CTTAGTGCCGCC------------------TGAGACCCCTAAGCTGTTGGCGCCCACAGC-AGCCTGGGCGGGCCGTCGACGGGCAGCCAAGGGTTAAGGGCAGGCGGGGCTCCCGCGGGAGGGGCGGTCCCAGTG-GTGGCCGAGGCGCCTCGCCCCGCCCCTTCCCCTCCCTTCCTCGGCC-------GGCG-----------------TGCCCGGCATTGGCGGCGCGGGCAGCGGGCTTTGAACCGGTATGGGTGC----TGTGTGCAGGGCGCCCCGGCTCGGGCTAGGGCTTGGAGGGCGCTGGGGGCCAGCGCGGGGCCCTGGCCCCCTCGGGCTGTGCCGGTAACAGTGGGGCTGGTGCCCGTGGGCCATGGCAGAGCCCGGGGCCCCCGGCGGGCTCACCCGGGACCAAGGTAAGCAGGCAGGAGGGTT-CCTGAAAGGGACTGCGACCCTCCCGGTGGGATTGCAGG---CCAGAATG----G----TGTTGGTGCACCCCCGAC--TGCGAG---AGCAGTGCTGGAC---------------------------CCCTCCCCTAGGG--TCTCTAGGAATGCATA-CGATGACCCCATTCCCCAATGACTACCCAGCCCCT----------CGCCCTCCACAGCCCCAG-CCGCCATCC-TGCAGGGAGAGGCCCCCTGCAGAGGGTACGGAGGTGAGCAG---CTGGAGG--GGGTGA-----CCCTGGCCTGACTCGCCCCCTGACTCCAGCCT-------GGAGGGGGCAGATCTGAG--------------GGA------GCTGGGGTGTCCAGTGGGGCTGCTCTCCTGGCCCAACCCCACTGCCTCGCGTGCCTGAGCTTCAGTCAGCACCATGGACAGGGCAGCATGGTCCTCCCTGGCGTCAAACAT------------------------------------------------------------------------------------------------------------TCTTGCTCAGATCTGTCCCACTTTCCC-GA------CCTGGG-GACCGGGCATTGCC----CTAGGCAACCATGCAGAACAGCAGGGTGATACGCCCTGAGGCTGCCCAGCGCTGCC------CGCAGAATCCAGGCTGGGCGTGAGAAGGGGCTGCCCGCAGGGCTTCTGAGCTGGCG-------------T--------CAG---CAGCCCAGCAGG-----------------------------------     
13 Octodon_degus-NW_004524689.1-165730_166063           79.8%  30.4%    ------------------------------------------------------------------------------------------------GGA------GT-GGGAGGGAACACCC--GCAGCTCCTCCCC-TCCCAGCTCCTGAC-GC-TGGCTCCGTGC---CTGCCTGGACCCCCTGGCTCTTGCAGATTTGCCCACTGCAGCCGGCAGCAGGAGCAGGGCTGTCAAGGGTTAAAGTCGGGCGGGGCTCTGCGGGAGGGGC-AGTCCCCAAG-CTT-CAGCTCCTCCCGCGCTCCCCTCCCCACTCTCCC-----------------------TTGCGG----------GCGGTGGCAGCCGCGGCAGGCAGCGGGCTTCGAACGAGCATGGGCTC----TGAATGCCAG-GCACCCGGCTGAGGCTGGGACTCAGGGAACACTGGAGACCAGCACAGGGTCCCGGCCCCCTGGGGCCGTGCTGGAAA--CTGGGGTTGGTACCCAGGGGCCATGGAAGAGCCTGGGCCCCCCAGTGGGCTCAGCCAGGACCAAGGTAAGGGGGCAGGAGGGTCCGGAGAAAAGGGCTGTGCCCGAGGCG--GGGACCGTGGGC--CCAAAG------CTGTTCGTGGGTC----AAG---------------GGCAGTGTGTGG---------------------------CCCTCCC-------------------TGTGGGCAGTGACCCCATTCCCACCCACTGCCACAGCT----------GCTCACGCTGTCCTGCCCTCAGCTGGCTCCTTGTAGTGAGAGACCCC--TGCAGAGGGTACAAGAGTCCTGGGGGAAGCAGGGGGAGGCAACCCTGGCCA-TGCCCACACCTTCCTGACTCCCAGCTGCCTCAG-GGATGCTGCTGCCCGAGGGGCAAGTCTAGGGTGTGTGGCAAGGGCTCTGCCTGAAGGGCTCCAAGCATCTGGTTTTA----TCCCAGCACCCTGGCCTGGCTCTGGTCAGCACCATGGACAGGGCAGCCACCTTCCCTCTGAGGGGCTG---CCGTTT----------------------------------------------------------------------------------------GCCGCCCTTGAGGTTCTCGCTCAGCTCTGCCCCACTTTCCT-GA------CCTGGG-AGTGGGGCAGTGCA----GTGGGCAGCCGGGCGGCATGAACAGCTGGGGTACAGGCGCCCAAGGCTTCTTGGGGTGTGAGGGGCT-GTCTGTAGGGCATGTGCAGGGGCACCTTCCTCAATGGGTGAG-----------------------------------------------------------------------------------     
14 Fukomys_damarensis-NW_022900935.1-164927_165311      78.7%  32.4%    ----------------------------------------------------------------------------------------------------------CTGGCACTGCCTCCCCTCTCGGCCTCTGAGC-CGGCTGGCTCAGTGCCCGCC------TGGTACCTCCACCCTCCAG--CTTGCGCAGATTTTGCCCACAGCAGCTTGGCAGCAGAAGCAGGGCCACCAAGGGTTAAGGGTGGGTGGGGCTCCTGCAGGAGGGGCGGTCCCCAGG-CTG-TGGCTCCTCCTGCACTCCCCTCCCCTCTCTCCC-----------------------TTCAAGGTGGCAGCAGCGGCGGGCGGCGGGCAGCGGCGGCAGGCTTTGAACCAGCATGGGTGC----TGCGTGCGGGGAGCCCTGGCTGAGGCTGGGGCGCAGGGGGCAGTGGAGGCTGGCACAGGGTACTGGCCCTCTGTGGCTGTGCTGGTAA--CTGAGATTGGTCCCCAGGGGCCATGGAAGAGCCTGGGCCACTTGGTGGGCTCAGCCAGGACCAAGGTAAGGGGGCGGGAGGATCCCTGGAAGGGGAATGTGCTGTGCAGGTGGGGACCCAGGCC--AGAGCT--------------------------------------------------GGG---------------------------CATTGGT-------------------CCGGGGCAGTGACCCCATTCCTACCCACTGCCACACAGA---------TCCTCACCCCTCCTGCCCTGGGCTGGCACCTTGCAGTGAGAGACCCC--TGCAGAGGGCAAAGAAGTCTTGGGCAGGAGGAGCTGACCCCAGCCATGCCG-AC----ACCTTCCCTGACCCCCAGCTGCCCCAG-GGGTTGCGGCTGCC------------TGGGGGGCAGGTCCAGGAGTGTGGGGTGTGGGCTCCAGTACTCTCCTGGCCTGACCCAAGCGCCCTGGCCCTGGCTCCATTCAGCACCACGGACAGGGCAGCCGCCTTCCTGTCAAGCTGCAGTT-CATTGC----------------------------------------------------------------------------------------GAGGCCCTTGAGGTTCCAGCTCAGCTCTGCCCCACTTTCCT-GA------CCTGAA-AGCTGGGCAGTGTT----TTGGGCAGGCGGGCAGCGT-GAACAACTGGGTGCAAGAACCCAAGGCTGCTTGGGGCGTGAGGGGGCTGTTCATGGGGCATCTGCACAGGCACCTTCCTCATTGGCTGAGCAGAGCAGAGCTT-------CTCCGCCAGGGA---------------------------------------------------     
15 Onychomys_torridus-NC_050444.1-161250_161613         81.9%  33.5%    ------------------------------------------------------------------------------------------------------------------GCCTCCTCTTCTGGGCTCTGAGCAGTGCTGGCTTGGTGCCCATATGAAACTCC----CTCCTTGA--TTCAAACTGATGCTCCTGAACAGCAGCCTTGTCAGGCCAGGAGCTGGATAGCCAAGAGTTAAGGGCAGGCGGGGCTCCCGTGGGAGGGGCGGTCCCAGTG-GCGGTGAGGCCT-CATCCTGCCCCTCCCCTCCCCTCCCCTCTCTTACTTCGCTAGCAA-------------------GCGCAGTAGCAGCTAGCTACAGCGGGCTTTGAACCGGTATGGGCGC----TGTGCGTGGGGCGCCTTGGATCAGGCTACAACTTTGGGGACACTGGGGACCAGCACAGGGTCCCGGCCCCCTTGGGCCGTGCCGGTAACAGTGGGGCTGGTGCCTGCGGGCCATGGAAGAGCCTGGGCCCACCGGTGGGCTTAGCCAGGACCAAGGTAAGGGCAGGTAGGAGGGTGTCTGGAAGAGGGTTGTGATTCCCAGC--TCAGCTCAGACCTCAGAGCAAGTGCAA--TG-----------------------------CTGTGCTCGAT---------------------------CCTGCTCTTAGGGTCTCTGGGA--GAGAAGCCTGGTAACCCCATTCCCTGTTAGCTGCTATACAG-------TGCAGCACCCCATCTTCCCCCATATTGGCATCTTGCTAATAGATGCTACACCCGTGAAGGTGCTGAGGTCCCAGTCTGCAGAATG--AGGTGTGCCTGCCCTACAGCTGCTATCTCCTGATTTCCAGTTTATCCAA-GGGGATGTCTGGAGGAGGGAAGGTCC------TGA------GCTGTCAGGGGCTGTGGGCTGGGGATGGG--------GGAAAGGGGACAATGCCCTGAAATCTGGTCAGCACCATGGACAGAACCATTGCCACCTTCTCTTCCAGTT--ACCCTGAGGTTCCCCAGAGTT------------------------------------------------------------------------------AA-ATAAACTCCCTTGCTTAGATCTGTCCCACTTTTCC-TG------TCTGGG-GAACTGGCATTGCC----CTAGGCAAACAGCACGG----ACCAGCAGGGGTGCATAAGTCTTCCAGGCTGCCCACAGGAGCGGAGCAAGGGGGTTGGGTGTG-AGAAGAAGCC--------------------------------------------------------------------------------------------------     
16 Galeopterus_variegatus-NW_007727608.1-226340_226548  86.6%  40.8%    --------------------------------------------------------------------------------NNNNNNNNNNNNNNNNNNN-------NNNNN----NNNNNNNNNNNNNNNNNNNNNNNNNNN---NN------NNNNNNNNNNNNNN----NNNNNNN---NNNNNNN-----NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-NNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNN----NNNNNNNNNNCTGCTGCGGCCTCATCCCGCCC--CTCCCCTC--CC----------------------------CTCCGTTGAGGGCGGCGGGCGGTGCCGGCAGCGGGCTTCCACCGGGCATGGGCAC----CGTGCGCGGAGCACCCCGGCTCAGGCTGGAGCTCGGGGGACGCTTGAGGCCAGCACGGGGCCCGGGCCCCCTCGGGCCGTGCCGGTAACAGTGGGGTTGGTGCCCGCGGGCCATGGAAGAGCCTGGGCCCCCCGGCGGGCTCAGCCGGGACCAAGGTAAGGGGGCAGAGGAAAGAGGCTGTGACCATCCCTGTGGGGTCTTCA-----------------GGCTGGAGTTGTCCATTGGTGACCCACTGACCCTTAGGAGCAGT-------------------------------GCTTGACCACCTCCCCACAGGGCCCCTGGGATCATGGGCTACTGACCCCATTTCCCACCAGCAGCTGCACACCCCTCAGCCTGCTCAGACCTGGTGGCCCGGGGGTCTGTCCTGATTGCCTA-GACCCCTGGCCCTGCATAAGCCAAGCCACTCTGTTCCTTCGGAAACTCTCCACGGCTCCAACGTTCAGGCCCCCGCGGTCGAGCTGACCAAGAGCCTGGTTTTAGACACCATGTGATC----------------CCTGTGCTGACCTCTCGCTGAGAGACGGT-------CCCCCCTACAGAGGTCCAGACAGTCCCGGTGGGTGGCAGGAGGAGGTGCCCCCCAGCAGTGCTGACACAGCTCCCTG-ACC----TCCAGCCTGCCCCCAGCATACACCTACTGCCCGGAGGGGG--CAG-GTTTGGAGATGCTGGGGTGGGTGG---------------GCGCTGGGGGCTCTTTTGGTGCACCCCACCCCGCCCCC-T-CCTCCAGCCAGGTGGAGGTGGCCCCGAGC----TTCAGTCAGCACCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------     
17 Microtus_ochrogaster-NW_004949136.1-160435_160770    81.0%  32.9%    --------------------------------------------------------------------------------------------------------------CACTGCCTACTCTTCTGGCCCCTGAGCAATGCTGGCTTGGTGCCCATCTGAAACTCC----CTCCTTGA--TTCAAACTGATGCCCCTGAACAGCAGCCATGGCAGGCCAGGAGCCGGACATCCAAGAGTTAAGGGCAGGCGGGGCTCCCGTGGGAGGGGCGGTCCCAGTG-GCGGTGAGGCCT-CATCCCGCCCCTCCCCTCCCCTCTTTTCCTTTG----CTAGCAAG-------------------CAGCAGTGGCAGCTAGCTACAGCAGGCTTTGAACCGGTATGGGCGC----TGTGCGTGGGGCGCCTTGGATCAGGCTACAACTCTGGGGACACTGGGGACCAGCACAGGGTCCCGGCCTCCTCGGGCCGTGCCGGTAACAGTGGGGCTGGTGCCTGCGGGCCATGGAAGAGCCTGGGTCCACCGGTGGGCTTAGCCAGGACCAAGGTAAGGGCAGGTAGGAGGGTGTCTGGAAGAGGCTCATGACTCCCAGC--TGGACTCAGACCCCAGAGCAAGGGATA--TG-----------------------------CTATGCTCGGT---------------------------CCCCCTCTTAGGGTCTCTGGGGG-GACAAGCCTGGTGACCCCATTCCCTGTCAGCTGCTATACAG-------TGCAGCACCCCAACTACCCCCATTTTGGCATCTTGCTAGTAGATGCTAC--CTGTGAAGGTACTGAGGTTCCACTCTGCAGGACG--AGGCGCGCCTGCCCCGCAGCCGCTGTCCCCTGATTTCCAGACCAACCGA-GGGGATGTCCGGAGGAGGGATTGTCC------GGA------GCTGTCAGGGGCTGTGGGCTGGGGGAGAG--------GGG-------CAAACGCTTGAGATCTAGTCAGCACCATGGACAGAACCACCGCCTTCCCTCC----CAAC--GGCCCGA----GGTTCTCTAG------------------------------------------------------------------------------AG-CTCAACTCCCTTGCTTGGATCTGTCCCACTTTCCC-TG------TCTAGG-GAACTGGCATTGCC----CTAGGCAAACAGCACGG----ACCAGCAGGGGTGCACGAGTCTTCCAGGCTGCCCACAGGAGAGGAGCAAAGGGGGTTGGGTGTGAGGAGGCATCTTTAGTGGGGGTGGG-----------------------------------------------------------------------------------     
18 Rattus_rattus-NC_046154.1-157862_158321              79.9%  32.8%    -----------------------------------------------------------------------------------------------------------------CGCCTCCCCTTCTGGCCTCTGAACAGTGCTGGCTCAGTGCCCATCCGAAACTCC----CTCCCCGA--TTCAAACCGATGCTTCTGAATAGCAGCCAAGGTGGGCCAGGAACCGGATAGCCAAGAGTTAAGGGCAGGCGGGGCTCCCCTGGGAGGGGCGGTCCCAGTG-GCAGCGAGGCCT-CATCCTGCCCCTCCCCTCTCCTGTCTTTCTTTGCCAGCAAGCAGC-------------------AGTAACAGCTAGCTAGCCTCAGCAGGCTTTGAACCGGTATGGGCGC----TGTGCGCGGGGCGCCTTGGATCAGGCTACAACTTTGGGGACACTGGGGACCAGCACAGGGTCCCGGCCCCCTGGGGCCTTGCCGGTAACAGTGGGTCTGGTGCCTGTGGGCCATGGAAGAGCCTGGGCCCCCTGGTGGGCTTAGCCAGGACCAAGGTAAGGGCATGTAGGAGGGTATCTGGAAGAGGGTTGTGACTCTCCTTGCTCACCTCAGACCTCAGGGCAAGCGCTG--TG-----------------------------CTATTCTTCAT---------------------------CTTAGGGTTTCTGGGAG---------AGTAGTTGGTGACCCCGTTCCCTGCCAGCACAGTGCAGC------ACCCCCGCTAGCATCTTGCAAGTAGATGTTAC-----------------CTTGCAAGAAGGTTCTGAGGTCCTGTTCTGCAGGGTG--AGGTGCTCCTATCCTGCAGCTACTGCTCCCTGGAACCCGGGGTATGTCT-GCA-------------GGAGAGGTCC------GGA------GCTATGAGGGGCTGTGGGCTAGTGGGGAA-----------GAAGGGGTAACGTTCTGAAGTCTGGTCAGCACCACGGACAGAACCATCACCTCCTTCCTTTCCCCTCCCAGTTGCCCTGAGGTTCCCTGG------------------------------------------------------------------------------AA-TTAAACTCCCTTGCTTAGATCTGCCCCACTTTCTT-GT------GTGGGG-GAACTGGCATTGCC----CTGGGCAGACAGCACGG----ACCAGCAGGGGTGCCTGAGTCCTCCAGGCTGCCCGCAAGAGCAGAGCATGGAGGTCGGGTGTGAGGAGAAGCCATTCTCTTGAGTTTTCTGAGCA-GGTATCTTCAGCA---------------------------------------------------------------     
19 Heterocephalus_glaber-NW_004624818.1-164985_165292   76.3%  28.8%    ---------------------------------------------------------------------------------------GCTCCGCCCCGT------GGGGGCACGCAACTGCCCCTTGGGGAGCGAGG---GGAGGGCGGGTGCACAGCGGAGGCTGCTGGAGCCAAGAGGGAGGAAGCATCAGCCGGCGCCGCCTCCCCTCCCGGCAGCAGAAGCTGGGCCGCCAAGGGTTAAGGGTGGGCGGGGCTCCTGCGGGAGGGGCGGTCCCCAGG-CTG-CGGCTCCTCCCGAGCTCCCCTCCCCTCTCTCCC-----------------------TCTG------------------------------------CGGCTTTGAACCGGCATGGGTGC----TGAGTGCGGGAAGCCCTGGCTCAGGCTGGGGCTCAGGGCACACTGGAGGCGGGCGCAGGGTCCCGGCCC----CTGTGGCTGTGCTAA--CTGAGGTTGTTGCCCAGGGGCCATGGAAGAGCCTGGGCCACCCCGTGGGCTCAGCCAGGACCAAGGTAAGGGGTGGGAGGGCCCCCG-GAAGGGGGCTGTGCTGCGGAGGCGGGGACCCCATTC--CCACCT------GCGGAGGGCT----------------------------GTGCCGGAC---------------------------TCCTCCC-------------------TGAGGGCGGGGACCCCATTCCCACCCACTGCCAGACAGC---------TCCTCGCCCCTCCCGCCGTGGGCTGGCGCCTTGCAGTGAGAGACCCC--TGCGGAGGGCACAGAAGTCTTGGGGAGCAGCAGGAGGTGAC-----------------CCCTTCCCCGACCCCCAGCTGCCCCAG-GGGATGTGGCTGCC------------TGGAGGCGTGGGCTCTGCCTGTG-------GGGTTCCGGGGCTGTCCTGTGGGACCCCAGCGCCCTGGCCCTGGCTCCAGTCAGCACCATGGACAGGGCAGCTGCCTTCTCTTCAAGGGGCAGCT-GTTTGC----------------------------------------------------------------------------------------CAGGCCCTCGAGGTTCCAGCTCAGCTCTGCCCCACTTTCCT-GA------CCTGGG-AGATGGCAGTGCTT----TGGGCGGACGGGCAGTGCC-AACAGCTGGGGTGCGGGCACCGAAGGCTTCCTGGGGTGTGAGGGGGCTG-CCCCAGGGCATCTGCACAGGCACCTTCTTCACTGGGTGAGCAGAGCTTCTGTG-------CCAGGGACTCTATCTGCCCCAGATGCGGTGCCAGCTCT-------------------------     
20 Meriones_unguiculatus-NW_018657773.1-158493_158853   78.2%  31.1%    ---------------------------------------------------------------------------------------------------------------ACCGCCTCCCCTTCTGGCTTCTGAGCAGTGCTGGTTCAGTGCCCATCTGAAACTTC----CTCCCTGC--TTCAAACGGATG-CCCTGAACAGCAGCCAAGGTGGGCCAGGAGCCGGAGAGCCAAGAGTTAAGGGCAGGCGGGGCTCCCGAGGGAGGGGCGGTCCCAGTG-GCTGTGAGGCCT-CATCCTGCCCCTCCCCTCCCCTCTCTTGCTTTGCTAGCAAGCAGC-------------------AGTAGCAGCTAGCT----ACAGTGGGCCTTGAACCGGTATGAGCAC----TGTGCGCGGGGCACCTTGGATCAGGCTACAAGTTTGGAGACACTGGGGACCGGCACAGGGTCCCGGCCCCCTCGGGCCTTGCCGGTAACAGTGGGGCTGGTGCCTGTGGGCCATGGAAGAGCCTGGGCCCCCTGGAGGGCTTAGCCAAGACCAAGGTAAGGACAAGCAGGAGGGTGTCTGGGAGAGGGTTGTGAGTCTCCCGGCTCAGCTCAGAGCCCAGGGCGAGTGCTG--TG-----------------------------CTGTTCTTGAT---------------------------CCCTCTCTTAGGG--AG---------AGCAGTCCGTGACCCCATTCCCTGCCAGCTGCTGTGC-A------ACGTAACACCCCGTCTGCCCCCACACTGGGAT-----------------CTTGCGAGTAGGTTCTGAGGTCCAGTTCTGCAGGATA--AAGTGCTCCTGCCATGCATCCACTGTCCTCTGATTTCCAGCCCAACC---------------------------------------------------------------------------------------CAGGGGAGGTCTGGAGCTCTGGTCAGCACCGTGGACAGAGCCACC------ATGGCCTTCTCTTCCAGCCGCTCTAAGGTTCCCTGG------------------------------------------------------------------------------AA-TTAAACTCCCTCACTTAGATCTGCCCCACTTTCTG-T--------CTGGG-GAACTGGCATTGCC----CTGGGCAGACAGCACGG----ATCAGCAGGGGTGTGTGAGTCCTCCTGGCTGCCCACAGGCACGGAGCAAGGAGGTTGGGTGTGACAAAAAGCCGTTCTCTGAGTTTTCTGAGCAG-TCTTTAGTGGTGGCTGTGGGAAAGAGCTTCTCCTGGGCTGGGTCTCCTTCTGCCCCACCACAAAGCTTGGTCTGGG     
21 Cricetulus_griseus-NW_003616165.1-34412_34751        80.4%  31.2%    ------------------------------------------------------------------------------------------------------------AGCATTGCCT-CCTCTCCTGCGTCTGACAATGCTGACTTGGTGCCCAATCTGAAACTCC----CTCCTTGA--TTCAAACTGACG-CCCCCAACAGCAGACATGGCAGGCCAGAAGCCGGATAGCCAAGAGTTAAGGGCAGGCGGGGCTCCCGTGGGAGGGGCGGTCCCAGTG-GCTGGTGAGACCTCATCCTGCCCCTCC-----CCTCTCTTCCTTTG----CTTGCAAG-------------------CAGCAGTAGCAGCTTGCTATCTCGGGCTTTGAACCGGTATGGGCGC----TGTGTGTGTGGCGCCTTGGATCAGGCTACAACTTTGGGGACACTGGGGACCAGCAAAGGGTCCTGGCCCCCTCGGGCCGTGCCGGTAACAGTGGGGCTGGTGCCTGCGGGCCATGGAAGAACCTGGGCCCCCCGGTGGGCTTAGCCAGGACCAAGGTAAGGACAGGTAGGAGGGTGTCTGGAAGAGGGTTGTGACTCCCAAC--TCAGCTCAGACTCCAGAGCAAGGGCTA--TG-----------------------------CTATGCTTGAT---------------------------CACTCTCTTAGGGTGTCTGGGAG-AGAAGA-CTGGTGACCCCATTCCCCGTCAGCCGC-----------------TGAACCCCTTCTTCCCTCACATTTGCATCTTGCTAGTAGATGCTAC--CTGTGAAGGTACTGAGGTCCCATTCTGCAGGATG--AGATGCACCCACCCTGCAGCCACTGCCCCCTCGGTTCCAGTCCAACCAA-GGGGACATCGGAGGAGGGAAGG-----------------------------------GGCTGTGGGTGGG--------GAAGAGGGGGCAATGTCCTGAAATCTGGTCAGCACCATGGACAGAATCGCCACCACCTCC------CTCGCCAGCTGCCCTGAGGTTCCCCAG------------------------------------------------------------------------------AG-TTAAACTCCCTTGCTTAGATCTGTCCCACTTTCC--TG------TCTGGG-GAACTGGCATTGCC----CTAGGCAAACAGCACGG----GCCAGCAGGGGTGCATGAATCTTCCAGGCTGCCCACAGGAGGAGAGCAAGGGGGTTGGGAGTGAGAAGAAGCCATTCTCTCTGTGTTTTTTGAGCAGGTATCTTCAGTGGTGGGGGTG------------------------------------------------------     
22 Nannospalax_galili-NW_008355419.1-154022_154384      85.7%  33.5%    -----------------------------------------------------------------------------------------------------------------TCAGAGAGGTTCTGGCAGCCAGCACAAACTGGCTGGGTGCCCACCTGAAACTCC----CTGCTTGA--TTTGCATCAACATCTCTGCACAGTGATGGTTGTGGACCAGGAGCTGGACAACTAAGGGTTAAGGGCAGGCGGGCCTCCTGTGGGAGGGGCGGTCCCAGTG-GTGGCGGGTGAGGCTTCATCCCGCCCCTCTTCTACCCTCTTCCTTCG--CTGGTGAGC-------------------CGCTGCTAGAAGCTAGCAACAACGGGCTTTGAACGCGGGCATGG--GCGCTGTGCGCGGGGCGCCCCGGATAGGGCTACAGCTTGGGGGACACTGGGGCCCAGTACAGGGCCCCGGCCCCCTCGGGCCGTGCCGATAACAGTGGGGCTGGTGCCTGCGGGCCATGGAAGAGTCTGGGTCCCCCGGCGGGCTCAGCCGGGACCAAGGTAAGGGGTAGGAGGGCCCCTGGAAGAA---GGCTGTGACTCTCCCTGTCCTGATCCCGGAGCCAGCGCTGTGCTGTGCATTGGTGACCTACTGGCTCATCGAA---GGCAGTGCTTGAG---------------------------CCCTCCTTTAGGG--TCTATGGGAGAGCAGCCTTGTGACAGCGTTCCCCTCCAGCTGCTCTAGT-----------CCAGTTCCTGTCTGCCCCACACTGGTATCTTGCAGGTA---GATGGCACTGAAAAGGTAAAGAGGTCCCATTCTGAAGGATG--AGGTGCTCCTACCCTTTGGCCACTGTCCCCTGACTCCCAGTCCACCCCA-GGGAATATCTGGAGGGGTAGGTCTGG------AGC------TGGGAAGGGGCG--GGGGT------------------------TGTGGGCTGGGCAGAGCTCTGATCAGCACCATGGACAGAACCCCAGGGCTTTTTATTTCCATCCTGCGGTGGTTTGCAGGGCACCAT------G---------------------------------------------AGGTGC----------TCTGGAGTTAAACACTCACACGCTTGCTCAGATCTGTCCCACTTTCCA-GG-------ATAGG-GAACTGGCATTGCC----CTGGGCAGACAAGGTGTGTGGGCCATCAGGGGTGCATGAGTCCCCAAGGCGCCCAGAGCGACAAATC------------------------------------------------------------------------------------------------------------------------------     
23 Mesocricetus_auratus-NW_024429219.1-159304_159671    85.9%  37.2%    --------------------------------------------------------------------------------------------------------------------TCTCCTCTTCTGGCCTCCGACAATGCTGACTTGGTGCACATCCGAAACTCC----CTCCCTGA--TTCAGACTGATGCCCCTGAGCAGCAACCACGGCAGGCCAGGAGCCGGACAGCCAAGAGTTAAGGGCAGGCGGGGCTCCCGTGGGAGGGGCGGTCCCAGTG-GTGGTGAGGTCT-CATCCTGCCCCTCCCCTCCCCTCCCCTCTGC-CTTTGCTTGCAAG-------------------CAGCTTTAGCAGCTTGCTATAACGGGCTTTGAACCGGCATGGGCGCTGTGTGTGTGTGGGGCGCCTTGGATCAGGCTACAACTTTGGGGACACTGGGGACCAGCACAGGGTCCCGGCCCCCTCGGGCTGTGCCGGTAACAGTGGGACTGGTGCCTGCGGGCCATGGAAGAGCCTGGACCCCCCGGTGGGCTTAGCCAGGACCAAGGTAAGGGCAGGTTAGGAGGGTTGTCTGGAAGAGGGTTGTGACTCCCAGCTCGGCTCAGACCCCAGAGCAAGCACTATATG-----------------------------CTATGCTCGAT---------------------------CACTCTCTCTCAGGGTGTCTGGGAGGGAAGATCGGTGACCCCATTCCCTGTCAGCTGCTGTACAGTGCAACACCCCCCCCCCCGTCTTCCCTCACGTTTGCGTCTTGCTAGTGGATGCTAC--CTGCGAAGGTACTAAGGTCCTGTTCTGCAGGATG--AGGTGCATCCACCCTGCAGCCACTGTCCCCTCATTTCCAGTTGGACCAA-GGGGACGTCTGGAGGAGGGAAGGGGC------AGT------GGTGGGGGGAGAAGGGG------------------------------CAATGTCC-TGAAATCGGTCAGCACCATGGACAGATCCACGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC--TCTCTCTCTCTCCCAACCCAGCTGCC-----CTGAGGTTCCCCAGAGTTAAACTCCCCTTGCTCAGAACTGTCCCACTTTCCT-GT------CTAGGG-AACTTGGCATTGCC----CTAGGCAAACAGCACGG----GCCAGCAGGGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------     
24 Trichechus_manatus-NW_004444058.1-152611_152893      87.7%  44.1%    ---------------------------------------------------------------------------------------------------CTGTGTCTGGGCACCACCTCTGCTGCTAGCCTCTGAGCAGAGCCAGTTCAGTGCTGCTGAGACCCCCA----CCCAATG---TGCGTCTATC-TCCACCGACAATGGGGCATGAGGGGCAATGAGACGGGCATTGAGGAGTTAAGGGCAGGCGGGGCTCCCGCAGGAGGGGCGGTGCCCGGTGGCAGCGGCGGCGGCTCTTCTC------------------T----------------------------CCCTCTCTCTCTTCCTCCCGCCTGGCAGCAGCGGCAAGCTGTTAGGCATGGGCTC----TGTGCTCAGGGCACCCCTGCTCAGGCTCGGGCTCTGGCAACCCGTGGGGCGAGCTCGGGGCACAGGCACCCTCAGGCCCTGCCGGTAGCGGTGGGATTGGTGCCCACGGGCCATGGAAGAGCCTGGGGCCCCCGGCGGGCTCAGCCGGGACCAAGGTAATGGTTTGGGTGGGGGTCGGGTGCAGGTGGGGCAGGAGCTCACTACAGGGGCT-----ACCTGGCCTGTGGGGGGCCCAATTCAGGAAGTGCTT-------------------------------------------------ACCCCTCTCCATGGGGTTCCCAGGGCTACAGCCCGATGACCCCATTCCCCAGCAACACACAC-ACCCCTATCATTCA---------------------------------------------------------------CTGCTGTCCTGGGTACTCGGA-GAGAGGGTCCCAC----------------------------------------------------------------------------------------------------------------TCACTTGGGAAGGGTGGAGACAAGCATGATGGGCAGCAGGGAGGAGGTGCCCACAGCCACACTGACCCAGTTCCCCTGACC----TCTGGCTTGCCCCCAGCCAATACCAGCTGCCTGGAGGGAGACAGGATCTGAGGATGTCCAGGGCTGGTGTGCTGTGGCCCATGGAACCCTGGGGGCTCACCTGGTCCACCTTCCTCTCCAATCAGGGCTTAAAAGAAGCACAGGTGGCCCTGAGCCTCAGTCAGTCAGTACCATGGACAGCAGCAGCCAATCCCATCCCTGCCTACCCTACTGCC---TGGCACT----CAGGCTGGAGACATCGGGCGCTGATCTGT--------------------CCTTTCCTGGTCTGGGGGCCCACGTATTGCCCTGGGAAGATGGTACTGAACACCAG------GGG----C----     
25 Jaculus_jaculus-NC_059106.1-155149_155324            80.5%  33.9%    --------------------------------------------------------------------------------------------------------------------------------------------GACTGGCTCAGTGACACCTGAGACCCC----TTTCTTGG--CTCACACTGATGCCCCTGCACCGCGGCCTTGGTGGACTGCTACCCAGGCAGCTAAGAGTTAAGAGCAGGCGGGGCTCTCATGGGAGGGGCGGTCCCAGTG-GTGGCGGCTGAATCCTCATCCTGCCCCTCCCCTCCCCTCTTCCTTCTCAAGCAAGCAGCCCTGGTAGCGGCAAAGAGCGAGCCAGAGAGCGAGCAGCAGTGGGCTTTGAACCGGCATGGGCGC----TGCGCATGGGGTGCTCTGGTTCTGGTCAGGGCTTGGAGGACTCTGGGGACCAGCACAGGACCCCAGTCCTCTTGAGCCTTGCCGGTAACAGTGGGGCTGGTGCCCACCGGCCATGGAAGAGCCTGGGTCCCCCGGTGGGCTCAGCCAGGACCAAGGTAAGGGGGGGAAGGAAAGTCCCTGGAAAGAGTCAGTAACTCTCCCTGTGCAGTTCCCAGGGCTGGTGCTGTGCGT-----TAGTGACCCATT----------------------------------------------------------CTCCTAGGG--TCTCTGGAAGCACAGCCCTATGACCCCGTTCTCCACCAGCTGCTGCAAAA------CTCCGTGTCCCCATCTGCCCCTGTGTAGGCATCTTGTAGATAGATGACAC--CTATAAAGATGCAGAGGTCCCGTTTTGTGGGATG--AAGTGCCCTG-CCCTAAGGCTACTTTCCCTTGACCTCCAGCCTGCCCCA-GGAAATACCCACTGGGTGGAGCGGACAAGTCTAGA------GCTGTTGGGCGCTGTGGATTTTAGGAGACTGTCTTCTTGGTCCAATCCCATGCCCTGAGCTCTGCTCAGCACCATGGACAGGGAAGCCACTGCCTCCCCTCCCAGGC--------------------------------------------------------TGAATCTTTATGTC-----AAAAGCT-----CTGAGATTCC-CTGGAGTCAAATACTCTTGCTCAGATCTGTCCCACTTTTCT-GG-------CCAGG-GAACTGGCATTACC----CTGGGTGGACAGCGTGGATGCAGGAGT--------------TCATGAGGCTGCCCATGGCTGTGGAGCAAGGAGGTCAGAAATTTGAG---------------------------------------------------------------------------------------------------------     
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